Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06254 and MPMX19_06255 are separated by 680 nucleotides MPMX19_06255 and MPMX19_06256 are separated by 857 nucleotides
MPMX19_06254: MPMX19_06254 - hypothetical protein, at 4,249 to 6,270
_06254
MPMX19_06255: MPMX19_06255 - hypothetical protein, at 6,951 to 8,183
_06255
MPMX19_06256: MPMX19_06256 - hypothetical protein, at 9,041 to 10,345
_06256
Position (kb)
6
7
8
9 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5.989 kb on + strand, within MPMX19_06254 at 6.045 kb on - strand, within MPMX19_06254 at 6.358 kb on - strand at 6.358 kb on - strand at 6.359 kb on + strand at 6.360 kb on - strand at 6.367 kb on + strand at 6.367 kb on + strand at 6.368 kb on - strand at 6.374 kb on + strand at 6.374 kb on + strand at 6.375 kb on - strand at 6.380 kb on + strand at 6.388 kb on + strand at 6.389 kb on - strand at 6.393 kb on + strand at 6.393 kb on + strand at 6.393 kb on + strand at 6.393 kb on + strand at 6.393 kb on + strand at 6.393 kb on + strand at 6.393 kb on + strand at 6.394 kb on - strand at 6.394 kb on - strand at 6.394 kb on - strand at 6.394 kb on - strand at 6.394 kb on - strand at 6.394 kb on - strand at 6.394 kb on - strand at 6.394 kb on - strand at 6.394 kb on - strand at 6.394 kb on - strand at 6.396 kb on + strand at 6.396 kb on + strand at 6.396 kb on + strand at 6.396 kb on + strand at 6.396 kb on + strand at 6.396 kb on + strand at 6.397 kb on - strand at 6.397 kb on - strand at 6.397 kb on - strand at 6.397 kb on - strand at 6.397 kb on - strand at 6.401 kb on + strand at 6.401 kb on + strand at 6.401 kb on + strand at 6.402 kb on - strand at 6.402 kb on - strand at 6.402 kb on - strand at 6.409 kb on + strand at 6.513 kb on + strand at 6.514 kb on - strand at 6.661 kb on + strand at 6.661 kb on + strand at 6.661 kb on + strand at 6.661 kb on + strand at 6.662 kb on - strand at 6.662 kb on - strand at 6.662 kb on - strand at 6.662 kb on - strand at 6.662 kb on - strand at 6.662 kb on - strand at 6.662 kb on - strand at 6.736 kb on + strand at 6.752 kb on - strand at 6.825 kb on - strand at 6.850 kb on + strand at 6.850 kb on + strand at 6.850 kb on + strand at 6.850 kb on + strand at 6.850 kb on + strand at 6.851 kb on - strand at 6.896 kb on + strand at 6.896 kb on + strand at 6.897 kb on - strand at 6.897 kb on - strand at 6.897 kb on - strand at 7.068 kb on + strand at 7.068 kb on + strand at 7.068 kb on + strand at 7.068 kb on + strand at 7.068 kb on + strand at 7.068 kb on + strand at 7.068 kb on + strand at 7.068 kb on + strand at 7.068 kb on + strand at 7.069 kb on - strand at 7.069 kb on - strand at 7.069 kb on - strand at 7.069 kb on - strand at 7.069 kb on - strand at 7.069 kb on - strand at 7.069 kb on - strand at 7.069 kb on - strand at 7.069 kb on - strand at 7.080 kb on + strand, within MPMX19_06255 at 7.121 kb on + strand, within MPMX19_06255 at 7.490 kb on + strand, within MPMX19_06255 at 7.490 kb on + strand, within MPMX19_06255 at 7.491 kb on - strand, within MPMX19_06255 at 7.491 kb on - strand, within MPMX19_06255 at 7.491 kb on - strand, within MPMX19_06255 at 7.644 kb on + strand, within MPMX19_06255 at 7.644 kb on + strand, within MPMX19_06255 at 7.644 kb on + strand, within MPMX19_06255 at 7.644 kb on + strand, within MPMX19_06255 at 7.645 kb on - strand, within MPMX19_06255 at 7.645 kb on - strand, within MPMX19_06255 at 7.789 kb on - strand, within MPMX19_06255 at 7.815 kb on + strand, within MPMX19_06255 at 7.816 kb on - strand, within MPMX19_06255 at 7.980 kb on + strand, within MPMX19_06255 at 7.980 kb on + strand, within MPMX19_06255 at 7.981 kb on - strand, within MPMX19_06255 at 8.112 kb on - strand at 8.112 kb on - strand at 8.112 kb on - strand at 8.112 kb on - strand at 8.112 kb on - strand at 8.112 kb on - strand at 8.112 kb on - strand at 8.112 kb on - strand at 8.112 kb on - strand at 8.314 kb on - strand at 8.355 kb on + strand at 8.355 kb on + strand at 8.355 kb on + strand at 8.355 kb on + strand at 8.355 kb on + strand at 8.356 kb on - strand at 8.356 kb on - strand at 8.356 kb on - strand at 8.356 kb on - strand at 8.356 kb on - strand at 8.356 kb on - strand at 8.356 kb on - strand at 8.419 kb on + strand at 8.419 kb on + strand at 8.420 kb on - strand at 8.497 kb on + strand at 8.498 kb on - strand at 8.616 kb on - strand at 8.668 kb on + strand at 8.669 kb on - strand at 8.813 kb on + strand at 8.814 kb on - strand at 8.814 kb on - strand at 8.916 kb on + strand at 8.916 kb on + strand at 8.917 kb on - strand at 8.917 kb on - strand at 8.933 kb on + strand at 8.970 kb on + strand at 8.971 kb on - strand at 8.971 kb on - strand at 8.971 kb on - strand at 8.971 kb on - strand at 8.971 kb on - strand at 8.971 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 5,989 + MPMX19_06254 0.86 -0.8 6,045 - MPMX19_06254 0.89 -0.2 6,358 - +0.6 6,358 - +1.1 6,359 + +0.5 6,360 - -0.4 6,367 + -2.3 6,367 + -1.2 6,368 - -0.3 6,374 + -1.1 6,374 + -0.7 6,375 - +0.2 6,380 + +1.1 6,388 + -2.3 6,389 - +0.5 6,393 + +0.4 6,393 + -3.4 6,393 + +0.8 6,393 + -1.3 6,393 + +0.0 6,393 + +0.3 6,393 + -1.1 6,394 - +0.0 6,394 - -1.3 6,394 - +0.1 6,394 - -0.8 6,394 - -1.8 6,394 - -0.7 6,394 - +1.5 6,394 - -0.3 6,394 - -0.1 6,394 - +0.5 6,396 + -0.7 6,396 + -1.1 6,396 + -0.3 6,396 + -0.6 6,396 + +0.5 6,396 + -0.2 6,397 - -0.3 6,397 - -1.4 6,397 - -0.4 6,397 - -0.3 6,397 - -0.2 6,401 + -0.6 6,401 + -0.1 6,401 + -1.8 6,402 - -0.5 6,402 - -0.1 6,402 - -1.1 6,409 + +0.8 6,513 + -0.7 6,514 - -0.4 6,661 + -0.1 6,661 + -1.5 6,661 + -3.1 6,661 + -0.2 6,662 - -0.5 6,662 - -0.8 6,662 - -0.4 6,662 - -0.1 6,662 - +0.2 6,662 - -0.8 6,662 - -0.7 6,736 + -0.6 6,752 - +0.1 6,825 - -2.7 6,850 + -0.6 6,850 + -1.4 6,850 + +0.5 6,850 + +0.9 6,850 + -0.1 6,851 - -3.0 6,896 + -2.8 6,896 + -0.1 6,897 - +0.5 6,897 - -0.4 6,897 - -0.1 7,068 + -0.7 7,068 + -1.9 7,068 + -0.1 7,068 + -0.7 7,068 + -0.5 7,068 + +0.2 7,068 + -1.7 7,068 + -0.8 7,068 + -0.1 7,069 - -0.8 7,069 - -0.2 7,069 - -0.0 7,069 - +0.8 7,069 - -1.5 7,069 - -0.7 7,069 - -0.5 7,069 - -0.3 7,069 - +1.1 7,080 + MPMX19_06255 0.10 -1.5 7,121 + MPMX19_06255 0.14 -1.5 7,490 + MPMX19_06255 0.44 -1.5 7,490 + MPMX19_06255 0.44 +1.0 7,491 - MPMX19_06255 0.44 +0.1 7,491 - MPMX19_06255 0.44 -1.8 7,491 - MPMX19_06255 0.44 -0.2 7,644 + MPMX19_06255 0.56 -1.5 7,644 + MPMX19_06255 0.56 -2.3 7,644 + MPMX19_06255 0.56 -0.5 7,644 + MPMX19_06255 0.56 -2.1 7,645 - MPMX19_06255 0.56 -1.8 7,645 - MPMX19_06255 0.56 -0.1 7,789 - MPMX19_06255 0.68 -1.3 7,815 + MPMX19_06255 0.70 -0.1 7,816 - MPMX19_06255 0.70 -0.1 7,980 + MPMX19_06255 0.83 -0.8 7,980 + MPMX19_06255 0.83 -0.7 7,981 - MPMX19_06255 0.84 -0.7 8,112 - +0.9 8,112 - -0.8 8,112 - +0.9 8,112 - +0.5 8,112 - +1.1 8,112 - +0.7 8,112 - +0.1 8,112 - +0.2 8,112 - -0.8 8,314 - +1.3 8,355 + +1.4 8,355 + +2.2 8,355 + -2.3 8,355 + -1.1 8,355 + -0.1 8,356 - +0.2 8,356 - -1.8 8,356 - -0.5 8,356 - +1.5 8,356 - -0.5 8,356 - +0.0 8,356 - -1.3 8,419 + -2.1 8,419 + +0.1 8,420 - +1.5 8,497 + -0.2 8,498 - -0.6 8,616 - -0.6 8,668 + -0.5 8,669 - +0.3 8,813 + +0.5 8,814 - +0.3 8,814 - +1.2 8,916 + -1.4 8,916 + -1.5 8,917 - +0.3 8,917 - -0.5 8,933 + +0.5 8,970 + -1.5 8,971 - +1.1 8,971 - -1.5 8,971 - -0.1 8,971 - -0.5 8,971 - -2.3 8,971 - -0.2
Or see this region's nucleotide sequence