Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04783 and MPMX19_04784 overlap by 8 nucleotides MPMX19_04784 and MPMX19_04785 overlap by 35 nucleotides
MPMX19_04783: MPMX19_04783 - Ubiquinone biosynthesis O-methyltransferase, mitochondrial, at 179,608 to 180,495
_04783
MPMX19_04784: MPMX19_04784 - N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase, at 180,488 to 182,758
_04784
MPMX19_04785: MPMX19_04785 - hypothetical protein, at 182,724 to 183,944
_04785
Position (kb)
180
181
182
183 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 179.596 kb on + strand at 179.596 kb on + strand at 179.597 kb on - strand at 179.597 kb on - strand at 179.898 kb on + strand, within MPMX19_04783 at 179.899 kb on + strand, within MPMX19_04783 at 179.899 kb on + strand, within MPMX19_04783 at 179.900 kb on - strand, within MPMX19_04783 at 180.088 kb on + strand, within MPMX19_04783 at 180.088 kb on + strand, within MPMX19_04783 at 180.088 kb on + strand, within MPMX19_04783 at 180.088 kb on + strand, within MPMX19_04783 at 180.088 kb on + strand, within MPMX19_04783 at 180.088 kb on + strand, within MPMX19_04783 at 180.088 kb on + strand, within MPMX19_04783 at 180.088 kb on + strand, within MPMX19_04783 at 180.089 kb on - strand, within MPMX19_04783 at 180.089 kb on - strand, within MPMX19_04783 at 180.089 kb on - strand, within MPMX19_04783 at 180.089 kb on - strand, within MPMX19_04783 at 180.089 kb on - strand, within MPMX19_04783 at 180.089 kb on - strand, within MPMX19_04783 at 180.089 kb on - strand, within MPMX19_04783 at 180.136 kb on + strand, within MPMX19_04783 at 180.136 kb on + strand, within MPMX19_04783 at 180.136 kb on + strand, within MPMX19_04783 at 180.136 kb on + strand, within MPMX19_04783 at 180.136 kb on + strand, within MPMX19_04783 at 180.136 kb on + strand, within MPMX19_04783 at 180.136 kb on + strand, within MPMX19_04783 at 180.136 kb on + strand, within MPMX19_04783 at 180.137 kb on - strand, within MPMX19_04783 at 180.137 kb on - strand, within MPMX19_04783 at 180.137 kb on - strand, within MPMX19_04783 at 180.137 kb on - strand, within MPMX19_04783 at 180.137 kb on - strand, within MPMX19_04783 at 180.137 kb on - strand, within MPMX19_04783 at 180.137 kb on - strand, within MPMX19_04783 at 180.137 kb on - strand, within MPMX19_04783 at 180.241 kb on + strand, within MPMX19_04783 at 180.242 kb on - strand, within MPMX19_04783 at 180.242 kb on - strand, within MPMX19_04783 at 180.247 kb on + strand, within MPMX19_04783 at 180.248 kb on - strand, within MPMX19_04783 at 180.322 kb on + strand, within MPMX19_04783 at 180.322 kb on + strand, within MPMX19_04783 at 180.322 kb on + strand, within MPMX19_04783 at 180.323 kb on - strand, within MPMX19_04783 at 180.323 kb on - strand, within MPMX19_04783 at 180.323 kb on - strand, within MPMX19_04783 at 180.340 kb on + strand, within MPMX19_04783 at 180.340 kb on + strand, within MPMX19_04783 at 180.656 kb on + strand at 180.656 kb on + strand at 180.656 kb on + strand at 180.656 kb on + strand at 180.656 kb on + strand at 180.656 kb on + strand at 180.656 kb on + strand at 180.656 kb on + strand at 180.657 kb on - strand at 180.657 kb on - strand at 180.657 kb on - strand at 180.657 kb on - strand at 180.657 kb on - strand at 180.657 kb on - strand at 180.845 kb on + strand, within MPMX19_04784 at 180.845 kb on + strand, within MPMX19_04784 at 181.041 kb on + strand, within MPMX19_04784 at 181.041 kb on + strand, within MPMX19_04784 at 181.042 kb on - strand, within MPMX19_04784 at 181.042 kb on - strand, within MPMX19_04784 at 181.214 kb on + strand, within MPMX19_04784 at 181.214 kb on + strand, within MPMX19_04784 at 181.215 kb on - strand, within MPMX19_04784 at 181.580 kb on + strand, within MPMX19_04784 at 181.581 kb on - strand, within MPMX19_04784 at 181.581 kb on - strand, within MPMX19_04784 at 181.581 kb on - strand, within MPMX19_04784 at 182.111 kb on + strand, within MPMX19_04784 at 182.111 kb on + strand, within MPMX19_04784 at 182.111 kb on + strand, within MPMX19_04784 at 182.111 kb on + strand, within MPMX19_04784 at 182.111 kb on + strand, within MPMX19_04784 at 182.111 kb on + strand, within MPMX19_04784 at 182.111 kb on + strand, within MPMX19_04784 at 182.111 kb on + strand, within MPMX19_04784 at 182.111 kb on + strand, within MPMX19_04784 at 182.111 kb on + strand, within MPMX19_04784 at 182.111 kb on + strand, within MPMX19_04784 at 182.112 kb on - strand, within MPMX19_04784 at 182.112 kb on - strand, within MPMX19_04784 at 182.112 kb on - strand, within MPMX19_04784 at 182.112 kb on - strand, within MPMX19_04784 at 182.112 kb on - strand, within MPMX19_04784 at 182.112 kb on - strand, within MPMX19_04784 at 182.112 kb on - strand, within MPMX19_04784 at 182.112 kb on - strand, within MPMX19_04784 at 182.112 kb on - strand, within MPMX19_04784 at 182.177 kb on + strand, within MPMX19_04784 at 182.178 kb on - strand, within MPMX19_04784 at 182.178 kb on - strand, within MPMX19_04784 at 182.178 kb on - strand, within MPMX19_04784 at 182.261 kb on + strand, within MPMX19_04784 at 182.261 kb on + strand, within MPMX19_04784 at 182.261 kb on + strand, within MPMX19_04784 at 182.261 kb on + strand, within MPMX19_04784 at 182.261 kb on + strand, within MPMX19_04784 at 182.262 kb on - strand, within MPMX19_04784 at 182.262 kb on - strand, within MPMX19_04784 at 182.262 kb on - strand, within MPMX19_04784 at 182.693 kb on + strand at 182.694 kb on - strand at 182.694 kb on - strand at 182.694 kb on - strand at 183.052 kb on + strand, within MPMX19_04785 at 183.052 kb on + strand, within MPMX19_04785 at 183.191 kb on + strand, within MPMX19_04785 at 183.191 kb on + strand, within MPMX19_04785 at 183.191 kb on + strand, within MPMX19_04785 at 183.191 kb on + strand, within MPMX19_04785 at 183.191 kb on + strand, within MPMX19_04785 at 183.192 kb on - strand, within MPMX19_04785 at 183.192 kb on - strand, within MPMX19_04785 at 183.192 kb on - strand, within MPMX19_04785 at 183.233 kb on + strand, within MPMX19_04785 at 183.337 kb on + strand, within MPMX19_04785 at 183.427 kb on + strand, within MPMX19_04785 at 183.427 kb on + strand, within MPMX19_04785 at 183.427 kb on + strand, within MPMX19_04785 at 183.427 kb on + strand, within MPMX19_04785 at 183.427 kb on + strand, within MPMX19_04785 at 183.427 kb on + strand, within MPMX19_04785 at 183.428 kb on - strand, within MPMX19_04785 at 183.428 kb on - strand, within MPMX19_04785 at 183.428 kb on - strand, within MPMX19_04785 at 183.478 kb on + strand, within MPMX19_04785 at 183.479 kb on - strand, within MPMX19_04785 at 183.479 kb on - strand, within MPMX19_04785 at 183.619 kb on + strand, within MPMX19_04785 at 183.619 kb on + strand, within MPMX19_04785 at 183.619 kb on + strand, within MPMX19_04785 at 183.619 kb on + strand, within MPMX19_04785 at 183.619 kb on + strand, within MPMX19_04785 at 183.619 kb on + strand, within MPMX19_04785 at 183.619 kb on + strand, within MPMX19_04785 at 183.619 kb on + strand, within MPMX19_04785 at 183.620 kb on - strand, within MPMX19_04785 at 183.620 kb on - strand, within MPMX19_04785 at 183.620 kb on - strand, within MPMX19_04785 at 183.620 kb on - strand, within MPMX19_04785 at 183.620 kb on - strand, within MPMX19_04785 at 183.757 kb on + strand, within MPMX19_04785
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 179,596 + -0.3 179,596 + +0.3 179,597 - -1.9 179,597 - -2.2 179,898 + MPMX19_04783 0.33 +0.4 179,899 + MPMX19_04783 0.33 -1.9 179,899 + MPMX19_04783 0.33 -0.4 179,900 - MPMX19_04783 0.33 -1.6 180,088 + MPMX19_04783 0.54 +0.7 180,088 + MPMX19_04783 0.54 -0.2 180,088 + MPMX19_04783 0.54 -0.2 180,088 + MPMX19_04783 0.54 -0.1 180,088 + MPMX19_04783 0.54 -1.2 180,088 + MPMX19_04783 0.54 +0.2 180,088 + MPMX19_04783 0.54 -0.2 180,088 + MPMX19_04783 0.54 +0.7 180,089 - MPMX19_04783 0.54 -1.2 180,089 - MPMX19_04783 0.54 -1.6 180,089 - MPMX19_04783 0.54 -0.6 180,089 - MPMX19_04783 0.54 -0.4 180,089 - MPMX19_04783 0.54 -0.1 180,089 - MPMX19_04783 0.54 +0.4 180,089 - MPMX19_04783 0.54 -0.4 180,136 + MPMX19_04783 0.59 +0.5 180,136 + MPMX19_04783 0.59 +0.2 180,136 + MPMX19_04783 0.59 -0.7 180,136 + MPMX19_04783 0.59 -0.6 180,136 + MPMX19_04783 0.59 +0.3 180,136 + MPMX19_04783 0.59 -0.2 180,136 + MPMX19_04783 0.59 +0.4 180,136 + MPMX19_04783 0.59 -1.9 180,137 - MPMX19_04783 0.60 -0.6 180,137 - MPMX19_04783 0.60 +0.4 180,137 - MPMX19_04783 0.60 -0.3 180,137 - MPMX19_04783 0.60 +0.0 180,137 - MPMX19_04783 0.60 +0.2 180,137 - MPMX19_04783 0.60 -1.6 180,137 - MPMX19_04783 0.60 +0.7 180,137 - MPMX19_04783 0.60 -0.7 180,241 + MPMX19_04783 0.71 -0.2 180,242 - MPMX19_04783 0.71 +0.1 180,242 - MPMX19_04783 0.71 +1.2 180,247 + MPMX19_04783 0.72 -1.2 180,248 - MPMX19_04783 0.72 +0.4 180,322 + MPMX19_04783 0.80 +0.2 180,322 + MPMX19_04783 0.80 +0.1 180,322 + MPMX19_04783 0.80 -1.1 180,323 - MPMX19_04783 0.81 -1.0 180,323 - MPMX19_04783 0.81 +0.4 180,323 - MPMX19_04783 0.81 -0.9 180,340 + MPMX19_04783 0.82 +0.4 180,340 + MPMX19_04783 0.82 -0.7 180,656 + -1.0 180,656 + -1.8 180,656 + -1.9 180,656 + -0.7 180,656 + +0.0 180,656 + -0.4 180,656 + +0.2 180,656 + +0.1 180,657 - +0.0 180,657 - +0.4 180,657 - -1.4 180,657 - +0.9 180,657 - -0.3 180,657 - -0.3 180,845 + MPMX19_04784 0.16 -0.6 180,845 + MPMX19_04784 0.16 +0.1 181,041 + MPMX19_04784 0.24 +0.4 181,041 + MPMX19_04784 0.24 +0.4 181,042 - MPMX19_04784 0.24 +0.7 181,042 - MPMX19_04784 0.24 -0.2 181,214 + MPMX19_04784 0.32 +0.3 181,214 + MPMX19_04784 0.32 -1.2 181,215 - MPMX19_04784 0.32 +1.1 181,580 + MPMX19_04784 0.48 +0.8 181,581 - MPMX19_04784 0.48 -1.9 181,581 - MPMX19_04784 0.48 -0.1 181,581 - MPMX19_04784 0.48 -0.2 182,111 + MPMX19_04784 0.71 +0.1 182,111 + MPMX19_04784 0.71 -1.2 182,111 + MPMX19_04784 0.71 -2.2 182,111 + MPMX19_04784 0.71 +2.0 182,111 + MPMX19_04784 0.71 +0.0 182,111 + MPMX19_04784 0.71 -0.6 182,111 + MPMX19_04784 0.71 -1.3 182,111 + MPMX19_04784 0.71 +1.4 182,111 + MPMX19_04784 0.71 -0.2 182,111 + MPMX19_04784 0.71 -0.9 182,111 + MPMX19_04784 0.71 -0.9 182,112 - MPMX19_04784 0.72 +0.4 182,112 - MPMX19_04784 0.72 +1.2 182,112 - MPMX19_04784 0.72 -0.4 182,112 - MPMX19_04784 0.72 -2.3 182,112 - MPMX19_04784 0.72 +0.7 182,112 - MPMX19_04784 0.72 -0.2 182,112 - MPMX19_04784 0.72 +0.7 182,112 - MPMX19_04784 0.72 +1.1 182,112 - MPMX19_04784 0.72 +0.4 182,177 + MPMX19_04784 0.74 +0.0 182,178 - MPMX19_04784 0.74 +0.4 182,178 - MPMX19_04784 0.74 +0.8 182,178 - MPMX19_04784 0.74 +0.9 182,261 + MPMX19_04784 0.78 -1.0 182,261 + MPMX19_04784 0.78 -0.1 182,261 + MPMX19_04784 0.78 +0.6 182,261 + MPMX19_04784 0.78 -0.1 182,261 + MPMX19_04784 0.78 +0.4 182,262 - MPMX19_04784 0.78 +0.4 182,262 - MPMX19_04784 0.78 -1.4 182,262 - MPMX19_04784 0.78 +0.7 182,693 + -0.5 182,694 - -1.2 182,694 - -1.6 182,694 - +0.9 183,052 + MPMX19_04785 0.27 +0.4 183,052 + MPMX19_04785 0.27 +0.7 183,191 + MPMX19_04785 0.38 +3.7 183,191 + MPMX19_04785 0.38 -0.7 183,191 + MPMX19_04785 0.38 +0.7 183,191 + MPMX19_04785 0.38 -1.2 183,191 + MPMX19_04785 0.38 -0.1 183,192 - MPMX19_04785 0.38 -1.6 183,192 - MPMX19_04785 0.38 -0.6 183,192 - MPMX19_04785 0.38 -0.9 183,233 + MPMX19_04785 0.42 +1.7 183,337 + MPMX19_04785 0.50 -0.1 183,427 + MPMX19_04785 0.58 -0.7 183,427 + MPMX19_04785 0.58 -0.6 183,427 + MPMX19_04785 0.58 +1.2 183,427 + MPMX19_04785 0.58 -0.3 183,427 + MPMX19_04785 0.58 -0.6 183,427 + MPMX19_04785 0.58 -0.3 183,428 - MPMX19_04785 0.58 -0.6 183,428 - MPMX19_04785 0.58 +0.4 183,428 - MPMX19_04785 0.58 -0.5 183,478 + MPMX19_04785 0.62 +0.4 183,479 - MPMX19_04785 0.62 +0.4 183,479 - MPMX19_04785 0.62 +1.2 183,619 + MPMX19_04785 0.73 +0.0 183,619 + MPMX19_04785 0.73 +0.2 183,619 + MPMX19_04785 0.73 -0.6 183,619 + MPMX19_04785 0.73 -0.2 183,619 + MPMX19_04785 0.73 +0.9 183,619 + MPMX19_04785 0.73 -2.6 183,619 + MPMX19_04785 0.73 -0.2 183,619 + MPMX19_04785 0.73 +1.2 183,620 - MPMX19_04785 0.73 +0.2 183,620 - MPMX19_04785 0.73 -1.0 183,620 - MPMX19_04785 0.73 +0.1 183,620 - MPMX19_04785 0.73 +0.4 183,620 - MPMX19_04785 0.73 +0.6 183,757 + MPMX19_04785 0.85 -0.9
Or see this region's nucleotide sequence