Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03103 and MPMX19_03104 are separated by 21 nucleotides MPMX19_03104 and MPMX19_03105 are separated by 5 nucleotides
MPMX19_03103: MPMX19_03103 - hypothetical protein, at 372,784 to 375,354
_03103
MPMX19_03104: MPMX19_03104 - hypothetical protein, at 375,376 to 376,509
_03104
MPMX19_03105: MPMX19_03105 - hypothetical protein, at 376,515 to 386,258
_03105
Position (kb) 375
376
377 Strain fitness (log2 ratio) -2
-1
0
1 at 374.811 kb on + strand, within MPMX19_03103 at 374.812 kb on - strand, within MPMX19_03103 at 374.812 kb on - strand, within MPMX19_03103 at 374.812 kb on - strand, within MPMX19_03103 at 374.812 kb on - strand, within MPMX19_03103 at 374.854 kb on + strand, within MPMX19_03103 at 374.961 kb on + strand, within MPMX19_03103 at 374.962 kb on - strand, within MPMX19_03103 at 374.962 kb on - strand, within MPMX19_03103 at 374.962 kb on - strand, within MPMX19_03103 at 375.005 kb on + strand, within MPMX19_03103 at 375.006 kb on - strand, within MPMX19_03103 at 375.157 kb on + strand at 375.157 kb on + strand at 375.157 kb on + strand at 375.157 kb on + strand at 375.158 kb on - strand at 375.158 kb on - strand at 375.158 kb on - strand at 375.158 kb on - strand at 375.532 kb on + strand, within MPMX19_03104 at 375.533 kb on - strand, within MPMX19_03104 at 375.533 kb on - strand, within MPMX19_03104 at 375.745 kb on + strand, within MPMX19_03104 at 375.745 kb on + strand, within MPMX19_03104 at 375.745 kb on + strand, within MPMX19_03104 at 375.823 kb on + strand, within MPMX19_03104 at 375.823 kb on + strand, within MPMX19_03104 at 375.823 kb on + strand, within MPMX19_03104 at 375.823 kb on + strand, within MPMX19_03104 at 375.823 kb on + strand, within MPMX19_03104 at 375.823 kb on + strand, within MPMX19_03104 at 375.823 kb on + strand, within MPMX19_03104 at 375.823 kb on + strand, within MPMX19_03104 at 375.823 kb on + strand, within MPMX19_03104 at 375.823 kb on + strand, within MPMX19_03104 at 375.823 kb on + strand, within MPMX19_03104 at 375.823 kb on + strand, within MPMX19_03104 at 375.823 kb on + strand, within MPMX19_03104 at 375.823 kb on + strand, within MPMX19_03104 at 375.823 kb on + strand, within MPMX19_03104 at 375.823 kb on + strand, within MPMX19_03104 at 375.823 kb on + strand, within MPMX19_03104 at 375.823 kb on + strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 375.824 kb on - strand, within MPMX19_03104 at 376.201 kb on + strand, within MPMX19_03104 at 376.201 kb on + strand, within MPMX19_03104 at 376.202 kb on - strand, within MPMX19_03104 at 376.202 kb on - strand, within MPMX19_03104 at 376.749 kb on + strand at 376.749 kb on + strand at 376.749 kb on + strand at 376.749 kb on + strand at 376.749 kb on + strand at 376.749 kb on + strand at 376.749 kb on + strand at 376.750 kb on - strand at 376.750 kb on - strand at 376.750 kb on - strand at 376.750 kb on - strand at 376.956 kb on + strand at 376.956 kb on + strand at 376.956 kb on + strand at 376.956 kb on + strand at 376.956 kb on + strand at 376.956 kb on + strand at 377.034 kb on + strand at 377.034 kb on + strand at 377.034 kb on + strand at 377.034 kb on + strand at 377.034 kb on + strand at 377.034 kb on + strand at 377.034 kb on + strand at 377.034 kb on + strand at 377.034 kb on + strand at 377.034 kb on + strand at 377.034 kb on + strand at 377.034 kb on + strand at 377.034 kb on + strand at 377.034 kb on + strand at 377.034 kb on + strand at 377.034 kb on + strand at 377.034 kb on + strand at 377.035 kb on - strand at 377.035 kb on - strand at 377.035 kb on - strand at 377.035 kb on - strand at 377.035 kb on - strand at 377.035 kb on - strand at 377.035 kb on - strand at 377.035 kb on - strand at 377.035 kb on - strand at 377.035 kb on - strand at 377.035 kb on - strand at 377.035 kb on - strand at 377.035 kb on - strand at 377.478 kb on + strand at 377.478 kb on + strand at 377.478 kb on + strand at 377.478 kb on + strand at 377.478 kb on + strand at 377.478 kb on + strand at 377.479 kb on - strand at 377.479 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 374,811 + MPMX19_03103 0.79 -0.8 374,812 - MPMX19_03103 0.79 -2.5 374,812 - MPMX19_03103 0.79 +0.4 374,812 - MPMX19_03103 0.79 -1.1 374,812 - MPMX19_03103 0.79 -1.1 374,854 + MPMX19_03103 0.81 +0.2 374,961 + MPMX19_03103 0.85 +0.3 374,962 - MPMX19_03103 0.85 +0.5 374,962 - MPMX19_03103 0.85 -1.1 374,962 - MPMX19_03103 0.85 +0.5 375,005 + MPMX19_03103 0.86 -1.3 375,006 - MPMX19_03103 0.86 +1.2 375,157 + +0.1 375,157 + +1.2 375,157 + -0.0 375,157 + -0.5 375,158 - -0.1 375,158 - +1.1 375,158 - -0.6 375,158 - -0.2 375,532 + MPMX19_03104 0.14 +1.7 375,533 - MPMX19_03104 0.14 +0.5 375,533 - MPMX19_03104 0.14 +0.5 375,745 + MPMX19_03104 0.33 +1.5 375,745 + MPMX19_03104 0.33 +0.7 375,745 + MPMX19_03104 0.33 -0.1 375,823 + MPMX19_03104 0.39 +1.5 375,823 + MPMX19_03104 0.39 -1.4 375,823 + MPMX19_03104 0.39 -0.3 375,823 + MPMX19_03104 0.39 -0.5 375,823 + MPMX19_03104 0.39 +0.2 375,823 + MPMX19_03104 0.39 +0.6 375,823 + MPMX19_03104 0.39 -1.1 375,823 + MPMX19_03104 0.39 +1.3 375,823 + MPMX19_03104 0.39 -0.5 375,823 + MPMX19_03104 0.39 -0.0 375,823 + MPMX19_03104 0.39 +1.1 375,823 + MPMX19_03104 0.39 +0.9 375,823 + MPMX19_03104 0.39 +0.1 375,823 + MPMX19_03104 0.39 -1.5 375,823 + MPMX19_03104 0.39 -0.5 375,823 + MPMX19_03104 0.39 -0.9 375,823 + MPMX19_03104 0.39 -0.5 375,823 + MPMX19_03104 0.39 +0.2 375,824 - MPMX19_03104 0.40 -0.7 375,824 - MPMX19_03104 0.40 -0.9 375,824 - MPMX19_03104 0.40 -0.2 375,824 - MPMX19_03104 0.40 +1.3 375,824 - MPMX19_03104 0.40 +1.0 375,824 - MPMX19_03104 0.40 +1.3 375,824 - MPMX19_03104 0.40 +0.4 375,824 - MPMX19_03104 0.40 +0.9 375,824 - MPMX19_03104 0.40 -0.2 375,824 - MPMX19_03104 0.40 -0.3 375,824 - MPMX19_03104 0.40 -0.2 375,824 - MPMX19_03104 0.40 -0.2 375,824 - MPMX19_03104 0.40 -0.5 375,824 - MPMX19_03104 0.40 +1.1 375,824 - MPMX19_03104 0.40 -0.2 375,824 - MPMX19_03104 0.40 +0.8 375,824 - MPMX19_03104 0.40 +0.6 375,824 - MPMX19_03104 0.40 -1.1 375,824 - MPMX19_03104 0.40 +0.5 375,824 - MPMX19_03104 0.40 +1.1 375,824 - MPMX19_03104 0.40 +1.5 375,824 - MPMX19_03104 0.40 +0.2 375,824 - MPMX19_03104 0.40 -0.7 375,824 - MPMX19_03104 0.40 -0.5 375,824 - MPMX19_03104 0.40 -0.5 375,824 - MPMX19_03104 0.40 -0.8 375,824 - MPMX19_03104 0.40 -0.1 375,824 - MPMX19_03104 0.40 -0.3 376,201 + MPMX19_03104 0.73 +0.9 376,201 + MPMX19_03104 0.73 +0.9 376,202 - MPMX19_03104 0.73 +1.1 376,202 - MPMX19_03104 0.73 -0.0 376,749 + +0.1 376,749 + +1.2 376,749 + -0.5 376,749 + +1.2 376,749 + +0.7 376,749 + +0.6 376,749 + -0.3 376,750 - -0.5 376,750 - +1.1 376,750 - +0.1 376,750 - -0.2 376,956 + +1.3 376,956 + +0.5 376,956 + -0.8 376,956 + -1.5 376,956 + -0.2 376,956 + -0.1 377,034 + -0.4 377,034 + +0.5 377,034 + +0.5 377,034 + -0.7 377,034 + +0.1 377,034 + +1.1 377,034 + -0.3 377,034 + +0.0 377,034 + +0.5 377,034 + +1.2 377,034 + -1.8 377,034 + -0.5 377,034 + +0.5 377,034 + -0.5 377,034 + -0.8 377,034 + -0.7 377,034 + -1.3 377,035 - +1.1 377,035 - -0.1 377,035 - +0.7 377,035 - -1.3 377,035 - +0.9 377,035 - -0.8 377,035 - -1.8 377,035 - +0.9 377,035 - +0.2 377,035 - -0.8 377,035 - -0.8 377,035 - -0.0 377,035 - +0.9 377,478 + +0.9 377,478 + -0.8 377,478 + +1.0 377,478 + +0.1 377,478 + +0.1 377,478 + -0.7 377,479 - +1.3 377,479 - +0.3
Or see this region's nucleotide sequence