Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02730 and MPMX19_02731 are separated by 105 nucleotides MPMX19_02731 and MPMX19_02732 are separated by 47 nucleotides
MPMX19_02730: MPMX19_02730 - Sensor histidine kinase RcsC, at 2,871,449 to 2,875,261
_02730
MPMX19_02731: MPMX19_02731 - Deoxyuridine 5'-triphosphate nucleotidohydrolase, at 2,875,367 to 2,875,834
_02731
MPMX19_02732: MPMX19_02732 - Coenzyme A biosynthesis bifunctional protein CoaBC, at 2,875,882 to 2,877,117
_02732
Position (kb)
2875
2876 Strain fitness (log2 ratio)
-2
-1
0
1 at 2875.104 kb on + strand at 2875.104 kb on + strand at 2875.104 kb on + strand at 2875.104 kb on + strand at 2875.104 kb on + strand at 2875.104 kb on + strand at 2875.104 kb on + strand at 2875.105 kb on - strand at 2875.105 kb on - strand at 2875.105 kb on - strand at 2875.105 kb on - strand at 2875.288 kb on + strand at 2875.288 kb on + strand at 2875.288 kb on + strand at 2875.289 kb on - strand at 2875.289 kb on - strand at 2875.289 kb on - strand at 2875.289 kb on - strand at 2875.289 kb on - strand at 2875.289 kb on - strand at 2875.316 kb on + strand at 2875.316 kb on + strand at 2875.316 kb on + strand at 2875.316 kb on + strand at 2875.316 kb on + strand at 2875.316 kb on + strand at 2875.317 kb on - strand at 2875.317 kb on - strand at 2875.317 kb on - strand at 2875.317 kb on - strand at 2875.317 kb on - strand at 2875.317 kb on - strand at 2875.317 kb on - strand at 2875.317 kb on - strand at 2875.317 kb on - strand at 2875.317 kb on - strand at 2875.317 kb on - strand at 2875.317 kb on - strand at 2875.549 kb on - strand, within MPMX19_02731 at 2875.761 kb on + strand, within MPMX19_02731 at 2875.762 kb on - strand, within MPMX19_02731 at 2875.762 kb on - strand, within MPMX19_02731 at 2875.883 kb on + strand at 2875.883 kb on + strand at 2875.884 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 2,875,104 + +0.4 2,875,104 + +0.8 2,875,104 + -2.6 2,875,104 + -0.1 2,875,104 + -1.6 2,875,104 + +0.9 2,875,104 + -0.1 2,875,105 - -0.6 2,875,105 - -1.1 2,875,105 - +1.1 2,875,105 - +0.0 2,875,288 + -0.6 2,875,288 + -1.1 2,875,288 + -1.6 2,875,289 - +0.9 2,875,289 - -0.1 2,875,289 - +0.1 2,875,289 - -1.4 2,875,289 - -0.6 2,875,289 - -0.6 2,875,316 + +0.0 2,875,316 + -0.4 2,875,316 + +0.2 2,875,316 + +0.0 2,875,316 + +0.1 2,875,316 + -2.6 2,875,317 - +0.0 2,875,317 - -0.3 2,875,317 - +0.0 2,875,317 - +0.1 2,875,317 - -0.3 2,875,317 - +0.7 2,875,317 - +0.9 2,875,317 - -1.0 2,875,317 - -0.0 2,875,317 - -1.6 2,875,317 - -0.1 2,875,317 - -1.3 2,875,549 - MPMX19_02731 0.39 +0.2 2,875,761 + MPMX19_02731 0.84 -0.6 2,875,762 - MPMX19_02731 0.84 -0.6 2,875,762 - MPMX19_02731 0.84 -0.3 2,875,883 + -0.6 2,875,883 + -1.4 2,875,884 - -1.2
Or see this region's nucleotide sequence