Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02544 and MPMX19_02545 are separated by 4 nucleotides MPMX19_02545 and MPMX19_02546 are separated by 61 nucleotides MPMX19_02546 and MPMX19_02547 are separated by 96 nucleotides
MPMX19_02544: MPMX19_02544 - hypothetical protein, at 2,660,499 to 2,661,041
_02544
MPMX19_02545: MPMX19_02545 - Imidazole glycerol phosphate synthase subunit HisH, at 2,661,046 to 2,661,690
_02545
MPMX19_02546: MPMX19_02546 - Histidine biosynthesis bifunctional protein HisB, at 2,661,752 to 2,662,414
_02546
MPMX19_02547: MPMX19_02547 - hypothetical protein, at 2,662,511 to 2,664,034
_02547
Position (kb)
2661
2662
2663 Strain fitness (log2 ratio)
-2
-1
0
1 at 2660.900 kb on - strand, within MPMX19_02544 at 2660.900 kb on - strand, within MPMX19_02544 at 2661.215 kb on + strand, within MPMX19_02545 at 2661.711 kb on + strand at 2661.712 kb on - strand at 2661.712 kb on - strand at 2661.712 kb on - strand at 2661.712 kb on - strand at 2661.712 kb on - strand at 2661.888 kb on + strand, within MPMX19_02546 at 2662.068 kb on + strand, within MPMX19_02546 at 2662.272 kb on + strand, within MPMX19_02546 at 2662.387 kb on - strand at 2662.458 kb on + strand at 2662.475 kb on + strand at 2662.476 kb on - strand at 2662.476 kb on - strand at 2662.476 kb on - strand at 2662.510 kb on + strand at 2662.510 kb on + strand at 2662.510 kb on + strand at 2662.510 kb on + strand at 2662.510 kb on + strand at 2662.511 kb on - strand at 2662.511 kb on - strand at 2662.511 kb on - strand at 2662.511 kb on - strand at 2662.511 kb on - strand at 2662.706 kb on + strand, within MPMX19_02547 at 2662.706 kb on + strand, within MPMX19_02547 at 2662.706 kb on + strand, within MPMX19_02547 at 2662.706 kb on + strand, within MPMX19_02547 at 2662.706 kb on + strand, within MPMX19_02547 at 2662.706 kb on + strand, within MPMX19_02547 at 2662.706 kb on + strand, within MPMX19_02547 at 2662.706 kb on + strand, within MPMX19_02547 at 2662.706 kb on + strand, within MPMX19_02547 at 2662.706 kb on + strand, within MPMX19_02547 at 2662.706 kb on + strand, within MPMX19_02547 at 2662.706 kb on + strand, within MPMX19_02547 at 2662.706 kb on + strand, within MPMX19_02547 at 2662.706 kb on + strand, within MPMX19_02547 at 2662.707 kb on - strand, within MPMX19_02547 at 2662.707 kb on - strand, within MPMX19_02547 at 2662.707 kb on - strand, within MPMX19_02547 at 2662.707 kb on - strand, within MPMX19_02547 at 2662.707 kb on - strand, within MPMX19_02547 at 2662.707 kb on - strand, within MPMX19_02547 at 2662.707 kb on - strand, within MPMX19_02547 at 2662.707 kb on - strand, within MPMX19_02547 at 2662.707 kb on - strand, within MPMX19_02547 at 2662.707 kb on - strand, within MPMX19_02547 at 2662.707 kb on - strand, within MPMX19_02547 at 2662.707 kb on - strand, within MPMX19_02547 at 2662.707 kb on - strand, within MPMX19_02547 at 2662.737 kb on - strand, within MPMX19_02547 at 2662.737 kb on - strand, within MPMX19_02547 at 2662.737 kb on - strand, within MPMX19_02547 at 2662.737 kb on - strand, within MPMX19_02547 at 2662.737 kb on - strand, within MPMX19_02547 at 2662.737 kb on - strand, within MPMX19_02547 at 2662.748 kb on + strand, within MPMX19_02547 at 2662.748 kb on + strand, within MPMX19_02547 at 2662.748 kb on + strand, within MPMX19_02547 at 2662.748 kb on + strand, within MPMX19_02547 at 2662.748 kb on + strand, within MPMX19_02547 at 2662.748 kb on + strand, within MPMX19_02547 at 2662.748 kb on + strand, within MPMX19_02547 at 2662.748 kb on + strand, within MPMX19_02547 at 2662.748 kb on + strand, within MPMX19_02547 at 2662.748 kb on + strand, within MPMX19_02547 at 2662.748 kb on + strand, within MPMX19_02547 at 2662.748 kb on + strand, within MPMX19_02547 at 2662.748 kb on + strand, within MPMX19_02547 at 2662.749 kb on - strand, within MPMX19_02547 at 2662.749 kb on - strand, within MPMX19_02547 at 2662.749 kb on - strand, within MPMX19_02547 at 2662.749 kb on - strand, within MPMX19_02547 at 2662.749 kb on - strand, within MPMX19_02547 at 2662.749 kb on - strand, within MPMX19_02547 at 2662.749 kb on - strand, within MPMX19_02547 at 2662.749 kb on - strand, within MPMX19_02547 at 2662.749 kb on - strand, within MPMX19_02547 at 2663.009 kb on + strand, within MPMX19_02547 at 2663.009 kb on + strand, within MPMX19_02547 at 2663.009 kb on + strand, within MPMX19_02547 at 2663.009 kb on + strand, within MPMX19_02547 at 2663.009 kb on + strand, within MPMX19_02547 at 2663.009 kb on + strand, within MPMX19_02547 at 2663.009 kb on + strand, within MPMX19_02547 at 2663.009 kb on + strand, within MPMX19_02547 at 2663.009 kb on + strand, within MPMX19_02547 at 2663.009 kb on + strand, within MPMX19_02547 at 2663.010 kb on - strand, within MPMX19_02547 at 2663.010 kb on - strand, within MPMX19_02547 at 2663.010 kb on - strand, within MPMX19_02547 at 2663.010 kb on - strand, within MPMX19_02547 at 2663.010 kb on - strand, within MPMX19_02547 at 2663.010 kb on - strand, within MPMX19_02547 at 2663.010 kb on - strand, within MPMX19_02547 at 2663.010 kb on - strand, within MPMX19_02547 at 2663.010 kb on - strand, within MPMX19_02547 at 2663.010 kb on - strand, within MPMX19_02547 at 2663.010 kb on - strand, within MPMX19_02547 at 2663.010 kb on - strand, within MPMX19_02547 at 2663.309 kb on + strand, within MPMX19_02547 at 2663.309 kb on + strand, within MPMX19_02547 at 2663.309 kb on + strand, within MPMX19_02547 at 2663.309 kb on + strand, within MPMX19_02547 at 2663.309 kb on + strand, within MPMX19_02547 at 2663.309 kb on + strand, within MPMX19_02547 at 2663.309 kb on + strand, within MPMX19_02547 at 2663.310 kb on - strand, within MPMX19_02547 at 2663.310 kb on - strand, within MPMX19_02547 at 2663.310 kb on - strand, within MPMX19_02547 at 2663.310 kb on - strand, within MPMX19_02547
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 2,660,900 - MPMX19_02544 0.74 -0.6 2,660,900 - MPMX19_02544 0.74 -1.2 2,661,215 + MPMX19_02545 0.26 -1.9 2,661,711 + -1.6 2,661,712 - -1.9 2,661,712 - -1.9 2,661,712 - -1.6 2,661,712 - -2.3 2,661,712 - -1.2 2,661,888 + MPMX19_02546 0.21 -1.6 2,662,068 + MPMX19_02546 0.48 -1.2 2,662,272 + MPMX19_02546 0.78 -1.9 2,662,387 - +0.7 2,662,458 + -2.2 2,662,475 + -2.2 2,662,476 - -0.2 2,662,476 - -0.3 2,662,476 - +1.2 2,662,510 + +0.4 2,662,510 + +0.0 2,662,510 + +0.0 2,662,510 + -0.3 2,662,510 + -1.9 2,662,511 - -0.2 2,662,511 - +0.2 2,662,511 - +0.1 2,662,511 - +1.4 2,662,511 - +0.9 2,662,706 + MPMX19_02547 0.13 -1.2 2,662,706 + MPMX19_02547 0.13 +0.1 2,662,706 + MPMX19_02547 0.13 -0.3 2,662,706 + MPMX19_02547 0.13 -0.4 2,662,706 + MPMX19_02547 0.13 -1.4 2,662,706 + MPMX19_02547 0.13 +0.4 2,662,706 + MPMX19_02547 0.13 -1.2 2,662,706 + MPMX19_02547 0.13 +0.1 2,662,706 + MPMX19_02547 0.13 -1.2 2,662,706 + MPMX19_02547 0.13 +0.2 2,662,706 + MPMX19_02547 0.13 +0.4 2,662,706 + MPMX19_02547 0.13 +0.4 2,662,706 + MPMX19_02547 0.13 +0.8 2,662,706 + MPMX19_02547 0.13 -0.1 2,662,707 - MPMX19_02547 0.13 +1.1 2,662,707 - MPMX19_02547 0.13 +0.1 2,662,707 - MPMX19_02547 0.13 -0.4 2,662,707 - MPMX19_02547 0.13 +0.1 2,662,707 - MPMX19_02547 0.13 +1.4 2,662,707 - MPMX19_02547 0.13 -0.6 2,662,707 - MPMX19_02547 0.13 -0.2 2,662,707 - MPMX19_02547 0.13 -0.6 2,662,707 - MPMX19_02547 0.13 -1.6 2,662,707 - MPMX19_02547 0.13 +0.4 2,662,707 - MPMX19_02547 0.13 +0.2 2,662,707 - MPMX19_02547 0.13 -0.2 2,662,707 - MPMX19_02547 0.13 -1.6 2,662,737 - MPMX19_02547 0.15 -0.1 2,662,737 - MPMX19_02547 0.15 +0.4 2,662,737 - MPMX19_02547 0.15 +0.8 2,662,737 - MPMX19_02547 0.15 -0.9 2,662,737 - MPMX19_02547 0.15 -0.2 2,662,737 - MPMX19_02547 0.15 -0.0 2,662,748 + MPMX19_02547 0.16 +1.6 2,662,748 + MPMX19_02547 0.16 -0.4 2,662,748 + MPMX19_02547 0.16 -1.2 2,662,748 + MPMX19_02547 0.16 -0.1 2,662,748 + MPMX19_02547 0.16 -1.4 2,662,748 + MPMX19_02547 0.16 -0.4 2,662,748 + MPMX19_02547 0.16 -0.4 2,662,748 + MPMX19_02547 0.16 -1.6 2,662,748 + MPMX19_02547 0.16 -0.4 2,662,748 + MPMX19_02547 0.16 +1.7 2,662,748 + MPMX19_02547 0.16 +0.8 2,662,748 + MPMX19_02547 0.16 -0.8 2,662,748 + MPMX19_02547 0.16 -1.2 2,662,749 - MPMX19_02547 0.16 -0.8 2,662,749 - MPMX19_02547 0.16 -0.3 2,662,749 - MPMX19_02547 0.16 -0.9 2,662,749 - MPMX19_02547 0.16 -1.6 2,662,749 - MPMX19_02547 0.16 -1.6 2,662,749 - MPMX19_02547 0.16 -1.6 2,662,749 - MPMX19_02547 0.16 -1.2 2,662,749 - MPMX19_02547 0.16 +0.4 2,662,749 - MPMX19_02547 0.16 -1.0 2,663,009 + MPMX19_02547 0.33 +1.4 2,663,009 + MPMX19_02547 0.33 -0.2 2,663,009 + MPMX19_02547 0.33 -2.6 2,663,009 + MPMX19_02547 0.33 +0.8 2,663,009 + MPMX19_02547 0.33 -1.4 2,663,009 + MPMX19_02547 0.33 -0.3 2,663,009 + MPMX19_02547 0.33 -1.3 2,663,009 + MPMX19_02547 0.33 -0.7 2,663,009 + MPMX19_02547 0.33 -1.4 2,663,009 + MPMX19_02547 0.33 +1.2 2,663,010 - MPMX19_02547 0.33 +0.5 2,663,010 - MPMX19_02547 0.33 -0.4 2,663,010 - MPMX19_02547 0.33 -0.4 2,663,010 - MPMX19_02547 0.33 -1.2 2,663,010 - MPMX19_02547 0.33 -2.3 2,663,010 - MPMX19_02547 0.33 -1.0 2,663,010 - MPMX19_02547 0.33 +0.4 2,663,010 - MPMX19_02547 0.33 +1.0 2,663,010 - MPMX19_02547 0.33 -2.6 2,663,010 - MPMX19_02547 0.33 -2.4 2,663,010 - MPMX19_02547 0.33 -1.4 2,663,010 - MPMX19_02547 0.33 -0.6 2,663,309 + MPMX19_02547 0.52 -0.9 2,663,309 + MPMX19_02547 0.52 -0.6 2,663,309 + MPMX19_02547 0.52 +0.6 2,663,309 + MPMX19_02547 0.52 -1.6 2,663,309 + MPMX19_02547 0.52 -0.8 2,663,309 + MPMX19_02547 0.52 +0.2 2,663,309 + MPMX19_02547 0.52 -0.4 2,663,310 - MPMX19_02547 0.52 -1.9 2,663,310 - MPMX19_02547 0.52 -0.1 2,663,310 - MPMX19_02547 0.52 -0.8 2,663,310 - MPMX19_02547 0.52 +0.5
Or see this region's nucleotide sequence