Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02064

Experiment: NLN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NLN
2,158,337	+		MPMX19_02062	0.66	-2.5
2,158,337	+		MPMX19_02062	0.66	-1.7
2,158,337	+		MPMX19_02062	0.66	+1.5
2,158,337	+		MPMX19_02062	0.66	-0.7
2,158,337	+		MPMX19_02062	0.66	-0.7
2,158,337	+		MPMX19_02062	0.66	-0.2
2,158,337	+		MPMX19_02062	0.66	-0.9
2,158,337	+		MPMX19_02062	0.66	+0.2
2,158,337	+		MPMX19_02062	0.66	+0.4
2,158,338	-		MPMX19_02062	0.66	-1.2
2,158,338	-		MPMX19_02062	0.66	-1.2
2,158,338	-		MPMX19_02062	0.66	+0.3
2,158,338	-		MPMX19_02062	0.66	+0.8
2,158,338	-		MPMX19_02062	0.66	+1.0
2,158,338	-		MPMX19_02062	0.66	-0.5
2,158,338	-		MPMX19_02062	0.66	-0.2
2,158,433	+		MPMX19_02062	0.80	-2.2
2,158,433	+		MPMX19_02062	0.80	-0.2
2,158,434	-		MPMX19_02062	0.80	-0.2
2,158,434	-		MPMX19_02062	0.80	+0.1
2,158,523	+				+2.2
2,158,523	+				-2.0
2,158,524	-				-2.2
2,158,544	+				-0.7
2,158,544	+				+0.7
2,158,544	+				-0.4
2,158,544	+				+1.3
2,158,544	+				-0.1
2,158,544	+				-0.1
2,158,544	+				+0.7
2,158,544	+				+0.1
2,158,544	+				-0.8
2,158,544	+				-1.2
2,158,544	+				+0.1
2,158,544	+				-0.2
2,158,544	+				-0.3
2,158,544	+				+1.1
2,158,544	+				+0.3
2,158,544	+				-0.1
2,158,544	+				-1.2
2,158,544	+				-0.7
2,158,544	+				+0.1
2,158,544	+				-0.5
2,158,544	+				-1.8
2,158,544	+				-2.5
2,158,544	+				+0.3
2,158,544	+				-3.1
2,158,545	-				-0.2
2,158,545	-				-0.7
2,158,545	-				+0.2
2,158,545	-				-0.4
2,158,545	-				+0.8
2,158,545	-				-0.9
2,158,545	-				-0.2
2,158,545	-				-1.7
2,158,545	-				-0.8
2,158,545	-				-0.7
2,158,545	-				-0.2
2,158,545	-				-0.1
2,158,545	-				-0.5
2,158,545	-				-2.7
2,158,545	-				-0.7
2,158,545	-				+0.0
2,158,545	-				-1.5
2,158,545	-				-0.7
2,158,545	-				-0.8
2,158,610	+				+0.2
2,158,610	+				-0.4
2,158,610	+				-0.2
2,158,610	+				+0.3
2,158,611	-				-0.7
2,158,611	-				+0.3
2,158,611	-				-0.4
2,158,611	-				-0.2
2,158,611	-				+1.3
2,158,611	-				+0.7
2,158,611	-				+0.2
2,158,611	-				-0.1
2,158,625	+				-1.7
2,158,625	+				-0.5
2,158,625	+				+0.1
2,158,625	+				+0.8
2,158,625	+				-0.9
2,158,625	+				-0.3
2,158,626	-				+1.6
2,158,626	-				-1.7
2,158,626	-				+0.3
2,158,626	-				-0.5
2,158,626	-				-1.7
2,158,626	-				+0.3
2,158,678	+				-0.1
2,158,678	+				+0.6
2,158,678	+				-1.1
2,158,678	+				+0.6
2,158,678	+				-0.1
2,158,678	+				-0.4
2,158,678	+				-1.1
2,158,678	+				+1.8
2,158,679	-				-0.3
2,158,679	-				-0.9
2,158,679	-				-2.2
2,158,679	-				+0.3
2,158,679	-				-0.1
2,158,703	+		MPMX19_02063	0.13	-0.0
2,158,703	+		MPMX19_02063	0.13	+0.8
2,158,703	+		MPMX19_02063	0.13	-0.8
2,158,703	+		MPMX19_02063	0.13	-0.9
2,158,703	+		MPMX19_02063	0.13	+0.9
2,158,704	-		MPMX19_02063	0.13	-3.5
2,158,704	-		MPMX19_02063	0.13	-0.5
2,158,704	-		MPMX19_02063	0.13	-0.7
2,158,964	+		MPMX19_02063	0.50	+0.6
2,158,964	+		MPMX19_02063	0.50	-1.1
2,158,964	+		MPMX19_02063	0.50	+0.3
2,158,965	-		MPMX19_02063	0.50	+0.3
2,159,010	-		MPMX19_02063	0.56	+0.1
2,159,282	+				+0.6
2,159,283	-				+0.3
2,159,283	-				-0.9
2,159,283	-				+1.1
2,159,283	-				-0.6
2,159,283	-				-0.6
2,159,283	-				-0.1
2,159,283	-				-0.9
2,159,283	-				-1.1
2,159,283	-				-0.6
2,159,283	-				-0.9
2,159,283	-				+1.2
2,159,330	+				+1.3
2,159,330	+				+2.7
2,159,330	+				+0.5
2,159,331	-				-2.0
2,159,331	-				+0.3
2,159,331	-				+0.1
2,159,348	+				-1.4
2,159,348	+				+0.2
2,159,349	-				-0.4
2,159,349	-				+0.8
2,159,631	-		MPMX19_02064	0.37	-0.8
2,159,660	+		MPMX19_02064	0.40	+0.9
2,159,660	+		MPMX19_02064	0.40	-1.5
2,159,660	+		MPMX19_02064	0.40	-0.9
2,159,660	+		MPMX19_02064	0.40	-0.5
2,159,660	+		MPMX19_02064	0.40	+0.3
2,159,660	+		MPMX19_02064	0.40	+1.3
2,159,660	+		MPMX19_02064	0.40	+0.6
2,159,660	+		MPMX19_02064	0.40	-0.5
2,159,660	+		MPMX19_02064	0.40	-0.5
2,159,660	+		MPMX19_02064	0.40	+1.5
2,159,660	+		MPMX19_02064	0.40	-0.9
2,159,660	+		MPMX19_02064	0.40	-0.1
2,159,660	+		MPMX19_02064	0.40	+0.3
2,159,660	+		MPMX19_02064	0.40	-0.4
2,159,660	+		MPMX19_02064	0.40	+0.6
2,159,660	+		MPMX19_02064	0.40	-0.2
2,159,660	+		MPMX19_02064	0.40	-0.7
2,159,661	-		MPMX19_02064	0.40	-0.3
2,159,661	-		MPMX19_02064	0.40	+0.6
2,159,661	-		MPMX19_02064	0.40	+0.6
2,159,661	-		MPMX19_02064	0.40	-1.2
2,159,661	-		MPMX19_02064	0.40	-0.2
2,159,661	-		MPMX19_02064	0.40	-0.7
2,159,661	-		MPMX19_02064	0.40	+0.6
2,159,661	-		MPMX19_02064	0.40	+0.5
2,159,661	-		MPMX19_02064	0.40	+0.0
2,159,661	-		MPMX19_02064	0.40	-0.4
2,159,661	-		MPMX19_02064	0.40	+0.3
2,159,661	-		MPMX19_02064	0.40	+1.2
2,159,661	-		MPMX19_02064	0.40	-0.1
2,159,661	-		MPMX19_02064	0.40	+0.0
2,159,661	-		MPMX19_02064	0.40	+1.2
2,159,873	+		MPMX19_02064	0.66	+1.2
2,159,873	+		MPMX19_02064	0.66	+0.3
2,159,933	+		MPMX19_02064	0.73	+2.7
2,159,933	+		MPMX19_02064	0.73	-0.1
2,159,933	+		MPMX19_02064	0.73	-1.8
2,159,933	+		MPMX19_02064	0.73	+0.6
2,159,934	-		MPMX19_02064	0.73	-0.7
2,159,934	-		MPMX19_02064	0.73	-0.1
2,159,934	-		MPMX19_02064	0.73	+1.3
2,159,934	-		MPMX19_02064	0.73	+0.9
2,159,934	-		MPMX19_02064	0.73	+0.7
2,159,934	-		MPMX19_02064	0.73	-1.2
2,159,934	-		MPMX19_02064	0.73	+0.3
2,159,934	-		MPMX19_02064	0.73	-1.2
2,160,256	+		MPMX19_02065	0.11	+0.8
2,160,256	+		MPMX19_02065	0.11	+0.3
2,160,257	-		MPMX19_02065	0.11	+0.3
2,160,257	-		MPMX19_02065	0.11	+0.3
2,160,257	-		MPMX19_02065	0.11	-0.5
2,160,257	-		MPMX19_02065	0.11	-1.7
2,160,412	+		MPMX19_02065	0.28	-1.7
2,160,412	+		MPMX19_02065	0.28	+0.9
2,160,412	+		MPMX19_02065	0.28	-0.9
2,160,412	+		MPMX19_02065	0.28	-0.1
2,160,413	-		MPMX19_02065	0.28	+0.7
2,160,413	-		MPMX19_02065	0.28	+0.0
2,160,413	-		MPMX19_02065	0.28	+0.6
2,160,557	+		MPMX19_02065	0.43	-2.2
2,160,557	+		MPMX19_02065	0.43	-0.2
2,160,616	+		MPMX19_02065	0.49	-0.7
2,160,616	+		MPMX19_02065	0.49	-0.7
2,160,617	-		MPMX19_02065	0.49	+0.8
2,160,634	+		MPMX19_02065	0.51	+0.0
2,160,634	+		MPMX19_02065	0.51	-0.2
2,160,634	+		MPMX19_02065	0.51	-0.3
2,160,634	+		MPMX19_02065	0.51	+0.6
2,160,635	-		MPMX19_02065	0.51	-2.2
2,160,635	-		MPMX19_02065	0.51	-0.1
2,160,635	-		MPMX19_02065	0.51	+2.3
2,160,635	-		MPMX19_02065	0.51	-0.8
2,160,760	+		MPMX19_02065	0.64	-0.2
2,160,760	+		MPMX19_02065	0.64	+0.8
2,160,760	+		MPMX19_02065	0.64	+1.1
2,160,760	+		MPMX19_02065	0.64	-2.0
2,160,760	+		MPMX19_02065	0.64	+0.8
2,160,760	+		MPMX19_02065	0.64	-0.1
2,160,760	+		MPMX19_02065	0.64	+0.8
2,160,760	+		MPMX19_02065	0.64	-2.0
2,160,760	+		MPMX19_02065	0.64	+2.3
2,160,760	+		MPMX19_02065	0.64	-0.3
2,160,760	+		MPMX19_02065	0.64	+0.2
2,160,760	+		MPMX19_02065	0.64	-0.0
2,160,761	-		MPMX19_02065	0.64	+0.6
2,160,761	-		MPMX19_02065	0.64	-1.2
2,160,761	-		MPMX19_02065	0.64	-1.0
2,160,761	-		MPMX19_02065	0.64	-1.1
2,160,761	-		MPMX19_02065	0.64	-0.2
2,160,761	-		MPMX19_02065	0.64	+1.3
2,160,761	-		MPMX19_02065	0.64	+0.6
2,160,761	-		MPMX19_02065	0.64	-1.1
2,160,761	-		MPMX19_02065	0.64	-1.2
2,160,761	-		MPMX19_02065	0.64	-0.7
2,160,859	+		MPMX19_02065	0.75	-1.7
2,160,859	+		MPMX19_02065	0.75	+0.2
2,160,859	+		MPMX19_02065	0.75	+0.9
2,160,859	+		MPMX19_02065	0.75	+0.0
2,160,859	+		MPMX19_02065	0.75	+0.6
2,160,859	+		MPMX19_02065	0.75	-2.0
2,160,860	-		MPMX19_02065	0.75	-0.3
2,160,860	-		MPMX19_02065	0.75	-1.6
2,160,860	-		MPMX19_02065	0.75	+1.1
2,160,860	-		MPMX19_02065	0.75	+0.3
2,160,860	-		MPMX19_02065	0.75	-3.1
2,160,860	-		MPMX19_02065	0.75	+1.3
2,160,860	-		MPMX19_02065	0.75	+0.9
2,160,860	-		MPMX19_02065	0.75	-0.8
2,160,860	-		MPMX19_02065	0.75	-0.7
2,160,860	-		MPMX19_02065	0.75	+0.1
2,160,860	-		MPMX19_02065	0.75	-0.2
2,160,860	-		MPMX19_02065	0.75	+0.8
2,160,886	+		MPMX19_02065	0.78	+0.2
2,160,886	+		MPMX19_02065	0.78	+0.3
2,160,886	+		MPMX19_02065	0.78	-0.5
2,160,887	-		MPMX19_02065	0.78	-1.0
2,160,937	+		MPMX19_02065	0.83	-0.5
2,161,006	+				+0.3
2,161,006	+				-0.5
2,161,006	+				-1.0
2,161,006	+				-1.0
2,161,006	+				-2.5
2,161,006	+				-0.6
2,161,006	+				+0.0
2,161,006	+				-0.9
2,161,006	+				+0.1
2,161,007	-				-1.1
2,161,007	-				-2.0
2,161,104	+				+0.1
2,161,104	+				-1.4
2,161,104	+				+1.0
2,161,105	-				+0.4
2,161,105	-				-1.8
2,161,105	-				+0.2
2,161,105	-				-3.1
2,161,105	-				+0.6
2,161,105	-				+0.9
2,161,105	-				-0.7
2,161,112	+				+0.8
2,161,112	+				-0.1
2,161,112	+				+0.6
2,161,112	+				-0.2
2,161,112	+				+0.5
2,161,112	+				-1.7
2,161,113	-				+0.3
2,161,113	-				+0.5
2,161,113	-				-0.6
2,161,113	-				+0.0