Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01473 and MPMX19_01474 overlap by 4 nucleotides MPMX19_01474 and MPMX19_01475 are separated by 47 nucleotides MPMX19_01475 and MPMX19_01476 are separated by 36 nucleotides
MPMX19_01473: MPMX19_01473 - hypothetical protein, at 1,546,635 to 1,547,453
_01473
MPMX19_01474: MPMX19_01474 - hypothetical protein, at 1,547,450 to 1,548,247
_01474
MPMX19_01475: MPMX19_01475 - hypothetical protein, at 1,548,295 to 1,548,678
_01475
MPMX19_01476: MPMX19_01476 - hypothetical protein, at 1,548,715 to 1,551,255
_01476
Position (kb)
1548
1549 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1547.352 kb on + strand, within MPMX19_01473 at 1547.352 kb on + strand, within MPMX19_01473 at 1547.352 kb on + strand, within MPMX19_01473 at 1547.352 kb on + strand, within MPMX19_01473 at 1547.352 kb on + strand, within MPMX19_01473 at 1547.352 kb on + strand, within MPMX19_01473 at 1547.353 kb on - strand, within MPMX19_01473 at 1547.353 kb on - strand, within MPMX19_01473 at 1547.353 kb on - strand, within MPMX19_01473 at 1547.353 kb on - strand, within MPMX19_01473 at 1547.353 kb on - strand, within MPMX19_01473 at 1547.353 kb on - strand, within MPMX19_01473 at 1547.353 kb on - strand, within MPMX19_01473 at 1547.353 kb on - strand, within MPMX19_01473 at 1547.711 kb on + strand, within MPMX19_01474 at 1547.711 kb on + strand, within MPMX19_01474 at 1547.711 kb on + strand, within MPMX19_01474 at 1547.712 kb on - strand, within MPMX19_01474 at 1547.712 kb on - strand, within MPMX19_01474 at 1547.732 kb on + strand, within MPMX19_01474 at 1547.732 kb on + strand, within MPMX19_01474 at 1547.732 kb on + strand, within MPMX19_01474 at 1547.732 kb on + strand, within MPMX19_01474 at 1547.732 kb on + strand, within MPMX19_01474 at 1547.732 kb on + strand, within MPMX19_01474 at 1547.732 kb on + strand, within MPMX19_01474 at 1547.733 kb on - strand, within MPMX19_01474 at 1547.733 kb on - strand, within MPMX19_01474 at 1547.733 kb on - strand, within MPMX19_01474 at 1547.733 kb on - strand, within MPMX19_01474 at 1547.733 kb on - strand, within MPMX19_01474 at 1547.733 kb on - strand, within MPMX19_01474 at 1547.733 kb on - strand, within MPMX19_01474 at 1547.973 kb on + strand, within MPMX19_01474 at 1547.973 kb on + strand, within MPMX19_01474 at 1547.973 kb on + strand, within MPMX19_01474 at 1547.973 kb on + strand, within MPMX19_01474 at 1547.973 kb on + strand, within MPMX19_01474 at 1547.973 kb on + strand, within MPMX19_01474 at 1547.974 kb on - strand, within MPMX19_01474 at 1547.974 kb on - strand, within MPMX19_01474 at 1547.974 kb on - strand, within MPMX19_01474 at 1547.974 kb on - strand, within MPMX19_01474 at 1547.974 kb on - strand, within MPMX19_01474 at 1547.974 kb on - strand, within MPMX19_01474 at 1547.974 kb on - strand, within MPMX19_01474 at 1547.974 kb on - strand, within MPMX19_01474 at 1547.984 kb on + strand, within MPMX19_01474 at 1547.984 kb on + strand, within MPMX19_01474 at 1547.984 kb on + strand, within MPMX19_01474 at 1547.984 kb on + strand, within MPMX19_01474 at 1547.984 kb on + strand, within MPMX19_01474 at 1547.984 kb on + strand, within MPMX19_01474 at 1547.985 kb on - strand, within MPMX19_01474 at 1547.985 kb on - strand, within MPMX19_01474 at 1547.985 kb on - strand, within MPMX19_01474 at 1547.985 kb on - strand, within MPMX19_01474 at 1547.985 kb on - strand, within MPMX19_01474 at 1547.985 kb on - strand, within MPMX19_01474 at 1547.985 kb on - strand, within MPMX19_01474 at 1547.985 kb on - strand, within MPMX19_01474 at 1547.985 kb on - strand, within MPMX19_01474 at 1547.985 kb on - strand, within MPMX19_01474 at 1547.985 kb on - strand, within MPMX19_01474 at 1547.985 kb on - strand, within MPMX19_01474 at 1548.171 kb on - strand at 1548.171 kb on - strand at 1548.347 kb on + strand, within MPMX19_01475 at 1548.347 kb on + strand, within MPMX19_01475 at 1548.347 kb on + strand, within MPMX19_01475 at 1548.347 kb on + strand, within MPMX19_01475 at 1548.348 kb on - strand, within MPMX19_01475 at 1548.348 kb on - strand, within MPMX19_01475 at 1548.348 kb on - strand, within MPMX19_01475 at 1548.348 kb on - strand, within MPMX19_01475 at 1548.348 kb on - strand, within MPMX19_01475 at 1548.557 kb on + strand, within MPMX19_01475 at 1548.557 kb on + strand, within MPMX19_01475 at 1548.557 kb on + strand, within MPMX19_01475 at 1548.557 kb on + strand, within MPMX19_01475 at 1548.557 kb on + strand, within MPMX19_01475 at 1548.558 kb on - strand, within MPMX19_01475 at 1548.558 kb on - strand, within MPMX19_01475 at 1548.558 kb on - strand, within MPMX19_01475 at 1548.558 kb on - strand, within MPMX19_01475 at 1548.558 kb on - strand, within MPMX19_01475 at 1548.558 kb on - strand, within MPMX19_01475 at 1548.694 kb on + strand at 1548.694 kb on + strand at 1548.694 kb on + strand at 1548.694 kb on + strand at 1548.694 kb on + strand at 1548.694 kb on + strand at 1548.694 kb on + strand at 1548.694 kb on + strand at 1548.694 kb on + strand at 1548.695 kb on - strand at 1548.695 kb on - strand at 1548.695 kb on - strand at 1548.695 kb on - strand at 1548.695 kb on - strand at 1548.695 kb on - strand at 1548.695 kb on - strand at 1548.695 kb on - strand at 1548.695 kb on - strand at 1548.695 kb on - strand at 1548.695 kb on - strand at 1548.716 kb on + strand at 1548.716 kb on + strand at 1548.716 kb on + strand at 1548.716 kb on + strand at 1548.716 kb on + strand at 1548.716 kb on + strand at 1548.716 kb on + strand at 1548.716 kb on + strand at 1548.717 kb on - strand at 1548.717 kb on - strand at 1548.717 kb on - strand at 1548.717 kb on - strand at 1548.717 kb on - strand at 1548.717 kb on - strand at 1548.717 kb on - strand at 1548.717 kb on - strand at 1548.717 kb on - strand at 1548.717 kb on - strand at 1548.717 kb on - strand at 1548.803 kb on + strand at 1548.803 kb on + strand at 1548.803 kb on + strand at 1548.804 kb on - strand at 1548.804 kb on - strand at 1548.804 kb on - strand at 1548.815 kb on + strand at 1548.815 kb on + strand at 1548.815 kb on + strand at 1548.815 kb on + strand at 1548.815 kb on + strand at 1548.815 kb on + strand at 1548.815 kb on + strand at 1548.815 kb on + strand at 1548.816 kb on - strand at 1548.836 kb on + strand at 1548.836 kb on + strand at 1548.836 kb on + strand at 1548.836 kb on + strand at 1548.836 kb on + strand at 1548.836 kb on + strand at 1548.836 kb on + strand at 1548.837 kb on - strand at 1548.837 kb on - strand at 1548.837 kb on - strand at 1548.837 kb on - strand at 1548.837 kb on - strand at 1548.837 kb on - strand at 1548.837 kb on - strand at 1548.837 kb on - strand at 1548.837 kb on - strand at 1549.004 kb on + strand, within MPMX19_01476 at 1549.004 kb on + strand, within MPMX19_01476 at 1549.005 kb on - strand, within MPMX19_01476 at 1549.005 kb on - strand, within MPMX19_01476 at 1549.005 kb on - strand, within MPMX19_01476 at 1549.005 kb on - strand, within MPMX19_01476 at 1549.005 kb on - strand, within MPMX19_01476 at 1549.005 kb on - strand, within MPMX19_01476 at 1549.020 kb on - strand, within MPMX19_01476 at 1549.020 kb on - strand, within MPMX19_01476 at 1549.357 kb on + strand, within MPMX19_01476 at 1549.357 kb on + strand, within MPMX19_01476 at 1549.358 kb on - strand, within MPMX19_01476 at 1549.358 kb on - strand, within MPMX19_01476 at 1549.358 kb on - strand, within MPMX19_01476 at 1549.451 kb on + strand, within MPMX19_01476 at 1549.451 kb on + strand, within MPMX19_01476 at 1549.451 kb on + strand, within MPMX19_01476 at 1549.451 kb on + strand, within MPMX19_01476 at 1549.452 kb on + strand, within MPMX19_01476 at 1549.452 kb on - strand, within MPMX19_01476 at 1549.452 kb on - strand, within MPMX19_01476 at 1549.452 kb on - strand, within MPMX19_01476 at 1549.452 kb on - strand, within MPMX19_01476 at 1549.583 kb on + strand, within MPMX19_01476 at 1549.583 kb on + strand, within MPMX19_01476 at 1549.583 kb on + strand, within MPMX19_01476 at 1549.583 kb on + strand, within MPMX19_01476 at 1549.583 kb on + strand, within MPMX19_01476 at 1549.583 kb on + strand, within MPMX19_01476 at 1549.583 kb on + strand, within MPMX19_01476 at 1549.583 kb on + strand, within MPMX19_01476 at 1549.583 kb on + strand, within MPMX19_01476 at 1549.584 kb on - strand, within MPMX19_01476 at 1549.584 kb on - strand, within MPMX19_01476 at 1549.584 kb on - strand, within MPMX19_01476 at 1549.584 kb on - strand, within MPMX19_01476 at 1549.584 kb on - strand, within MPMX19_01476 at 1549.584 kb on - strand, within MPMX19_01476 at 1549.584 kb on - strand, within MPMX19_01476 at 1549.584 kb on - strand, within MPMX19_01476 at 1549.584 kb on - strand, within MPMX19_01476 at 1549.584 kb on - strand, within MPMX19_01476 at 1549.584 kb on - strand, within MPMX19_01476 at 1549.584 kb on - strand, within MPMX19_01476 at 1549.584 kb on - strand, within MPMX19_01476 at 1549.584 kb on - strand, within MPMX19_01476 at 1549.584 kb on - strand, within MPMX19_01476 at 1549.584 kb on - strand, within MPMX19_01476 at 1549.584 kb on - strand, within MPMX19_01476 at 1549.584 kb on - strand, within MPMX19_01476 at 1549.584 kb on - strand, within MPMX19_01476 at 1549.628 kb on + strand, within MPMX19_01476
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 1,547,352 + MPMX19_01473 0.88 -0.2 1,547,352 + MPMX19_01473 0.88 -1.6 1,547,352 + MPMX19_01473 0.88 +0.4 1,547,352 + MPMX19_01473 0.88 -0.9 1,547,352 + MPMX19_01473 0.88 +0.8 1,547,352 + MPMX19_01473 0.88 -0.6 1,547,353 - MPMX19_01473 0.88 +0.4 1,547,353 - MPMX19_01473 0.88 +0.4 1,547,353 - MPMX19_01473 0.88 -0.6 1,547,353 - MPMX19_01473 0.88 -0.6 1,547,353 - MPMX19_01473 0.88 +0.2 1,547,353 - MPMX19_01473 0.88 +0.7 1,547,353 - MPMX19_01473 0.88 +1.0 1,547,353 - MPMX19_01473 0.88 -0.4 1,547,711 + MPMX19_01474 0.33 -0.5 1,547,711 + MPMX19_01474 0.33 +0.4 1,547,711 + MPMX19_01474 0.33 -0.1 1,547,712 - MPMX19_01474 0.33 -1.6 1,547,712 - MPMX19_01474 0.33 -0.6 1,547,732 + MPMX19_01474 0.35 -1.2 1,547,732 + MPMX19_01474 0.35 -0.5 1,547,732 + MPMX19_01474 0.35 -0.3 1,547,732 + MPMX19_01474 0.35 +1.2 1,547,732 + MPMX19_01474 0.35 +0.5 1,547,732 + MPMX19_01474 0.35 -0.6 1,547,732 + MPMX19_01474 0.35 -0.2 1,547,733 - MPMX19_01474 0.35 +0.6 1,547,733 - MPMX19_01474 0.35 -0.3 1,547,733 - MPMX19_01474 0.35 -0.5 1,547,733 - MPMX19_01474 0.35 +0.4 1,547,733 - MPMX19_01474 0.35 -0.1 1,547,733 - MPMX19_01474 0.35 -0.8 1,547,733 - MPMX19_01474 0.35 +1.5 1,547,973 + MPMX19_01474 0.66 +0.7 1,547,973 + MPMX19_01474 0.66 -1.0 1,547,973 + MPMX19_01474 0.66 -0.0 1,547,973 + MPMX19_01474 0.66 -2.5 1,547,973 + MPMX19_01474 0.66 +0.5 1,547,973 + MPMX19_01474 0.66 -2.2 1,547,974 - MPMX19_01474 0.66 -0.4 1,547,974 - MPMX19_01474 0.66 -1.5 1,547,974 - MPMX19_01474 0.66 -0.3 1,547,974 - MPMX19_01474 0.66 -1.2 1,547,974 - MPMX19_01474 0.66 -0.3 1,547,974 - MPMX19_01474 0.66 -0.5 1,547,974 - MPMX19_01474 0.66 -0.9 1,547,974 - MPMX19_01474 0.66 -0.6 1,547,984 + MPMX19_01474 0.67 +0.4 1,547,984 + MPMX19_01474 0.67 +0.4 1,547,984 + MPMX19_01474 0.67 -0.4 1,547,984 + MPMX19_01474 0.67 -0.1 1,547,984 + MPMX19_01474 0.67 +0.4 1,547,984 + MPMX19_01474 0.67 -1.4 1,547,985 - MPMX19_01474 0.67 -1.6 1,547,985 - MPMX19_01474 0.67 -0.6 1,547,985 - MPMX19_01474 0.67 +0.4 1,547,985 - MPMX19_01474 0.67 -0.6 1,547,985 - MPMX19_01474 0.67 -0.2 1,547,985 - MPMX19_01474 0.67 -0.3 1,547,985 - MPMX19_01474 0.67 +0.7 1,547,985 - MPMX19_01474 0.67 -0.8 1,547,985 - MPMX19_01474 0.67 +1.1 1,547,985 - MPMX19_01474 0.67 +1.9 1,547,985 - MPMX19_01474 0.67 -2.6 1,547,985 - MPMX19_01474 0.67 -1.0 1,548,171 - -1.6 1,548,171 - -0.3 1,548,347 + MPMX19_01475 0.14 -1.0 1,548,347 + MPMX19_01475 0.14 -0.1 1,548,347 + MPMX19_01475 0.14 +0.0 1,548,347 + MPMX19_01475 0.14 -0.4 1,548,348 - MPMX19_01475 0.14 -0.9 1,548,348 - MPMX19_01475 0.14 -0.4 1,548,348 - MPMX19_01475 0.14 -0.2 1,548,348 - MPMX19_01475 0.14 -2.5 1,548,348 - MPMX19_01475 0.14 -1.1 1,548,557 + MPMX19_01475 0.68 -0.6 1,548,557 + MPMX19_01475 0.68 -1.2 1,548,557 + MPMX19_01475 0.68 -1.2 1,548,557 + MPMX19_01475 0.68 -0.4 1,548,557 + MPMX19_01475 0.68 -0.9 1,548,558 - MPMX19_01475 0.68 -0.6 1,548,558 - MPMX19_01475 0.68 -2.2 1,548,558 - MPMX19_01475 0.68 -1.2 1,548,558 - MPMX19_01475 0.68 -0.4 1,548,558 - MPMX19_01475 0.68 -0.1 1,548,558 - MPMX19_01475 0.68 -0.6 1,548,694 + -1.0 1,548,694 + +0.4 1,548,694 + +0.0 1,548,694 + -1.1 1,548,694 + -0.1 1,548,694 + -0.6 1,548,694 + -0.1 1,548,694 + -0.1 1,548,694 + -2.5 1,548,695 - +0.4 1,548,695 - +0.1 1,548,695 - -0.1 1,548,695 - +0.4 1,548,695 - +0.8 1,548,695 - -2.0 1,548,695 - -1.5 1,548,695 - -2.5 1,548,695 - +0.1 1,548,695 - -1.4 1,548,695 - -0.5 1,548,716 + -0.8 1,548,716 + -0.5 1,548,716 + -0.9 1,548,716 + +0.2 1,548,716 + -0.3 1,548,716 + -0.6 1,548,716 + -0.3 1,548,716 + +0.4 1,548,717 - -0.7 1,548,717 - -1.0 1,548,717 - +0.5 1,548,717 - -1.0 1,548,717 - -0.3 1,548,717 - -1.5 1,548,717 - -0.1 1,548,717 - -0.6 1,548,717 - +0.8 1,548,717 - -0.4 1,548,717 - -0.4 1,548,803 + +0.4 1,548,803 + -0.5 1,548,803 + -0.3 1,548,804 - -1.6 1,548,804 - +0.5 1,548,804 - -3.1 1,548,815 + -0.1 1,548,815 + +0.1 1,548,815 + -0.4 1,548,815 + -2.0 1,548,815 + -0.2 1,548,815 + -0.4 1,548,815 + -1.1 1,548,815 + -0.4 1,548,816 - -0.6 1,548,836 + -0.4 1,548,836 + +2.1 1,548,836 + -0.6 1,548,836 + +0.0 1,548,836 + -1.6 1,548,836 + -1.5 1,548,836 + -1.6 1,548,837 - -0.1 1,548,837 - +0.9 1,548,837 - +1.1 1,548,837 - +0.4 1,548,837 - -0.1 1,548,837 - -0.1 1,548,837 - -0.3 1,548,837 - -0.8 1,548,837 - -2.0 1,549,004 + MPMX19_01476 0.11 +0.5 1,549,004 + MPMX19_01476 0.11 -0.1 1,549,005 - MPMX19_01476 0.11 -0.6 1,549,005 - MPMX19_01476 0.11 -0.0 1,549,005 - MPMX19_01476 0.11 -1.5 1,549,005 - MPMX19_01476 0.11 -0.3 1,549,005 - MPMX19_01476 0.11 +1.8 1,549,005 - MPMX19_01476 0.11 +1.1 1,549,020 - MPMX19_01476 0.12 -2.0 1,549,020 - MPMX19_01476 0.12 -2.0 1,549,357 + MPMX19_01476 0.25 -0.5 1,549,357 + MPMX19_01476 0.25 -0.6 1,549,358 - MPMX19_01476 0.25 -0.3 1,549,358 - MPMX19_01476 0.25 -2.0 1,549,358 - MPMX19_01476 0.25 +0.2 1,549,451 + MPMX19_01476 0.29 -1.1 1,549,451 + MPMX19_01476 0.29 -2.0 1,549,451 + MPMX19_01476 0.29 +0.4 1,549,451 + MPMX19_01476 0.29 +0.6 1,549,452 + MPMX19_01476 0.29 +0.5 1,549,452 - MPMX19_01476 0.29 -0.2 1,549,452 - MPMX19_01476 0.29 +0.1 1,549,452 - MPMX19_01476 0.29 -1.6 1,549,452 - MPMX19_01476 0.29 -0.1 1,549,583 + MPMX19_01476 0.34 +0.2 1,549,583 + MPMX19_01476 0.34 +0.9 1,549,583 + MPMX19_01476 0.34 -0.1 1,549,583 + MPMX19_01476 0.34 +0.8 1,549,583 + MPMX19_01476 0.34 +0.6 1,549,583 + MPMX19_01476 0.34 -0.0 1,549,583 + MPMX19_01476 0.34 -0.6 1,549,583 + MPMX19_01476 0.34 +0.0 1,549,583 + MPMX19_01476 0.34 +0.9 1,549,584 - MPMX19_01476 0.34 -0.1 1,549,584 - MPMX19_01476 0.34 +0.9 1,549,584 - MPMX19_01476 0.34 +0.5 1,549,584 - MPMX19_01476 0.34 -2.0 1,549,584 - MPMX19_01476 0.34 -1.0 1,549,584 - MPMX19_01476 0.34 -0.6 1,549,584 - MPMX19_01476 0.34 +1.0 1,549,584 - MPMX19_01476 0.34 +0.4 1,549,584 - MPMX19_01476 0.34 -0.2 1,549,584 - MPMX19_01476 0.34 +0.5 1,549,584 - MPMX19_01476 0.34 +0.5 1,549,584 - MPMX19_01476 0.34 -0.5 1,549,584 - MPMX19_01476 0.34 -0.3 1,549,584 - MPMX19_01476 0.34 -0.3 1,549,584 - MPMX19_01476 0.34 -0.4 1,549,584 - MPMX19_01476 0.34 +0.5 1,549,584 - MPMX19_01476 0.34 +0.1 1,549,584 - MPMX19_01476 0.34 -0.1 1,549,584 - MPMX19_01476 0.34 -0.6 1,549,628 + MPMX19_01476 0.36 -0.6
Or see this region's nucleotide sequence