Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00785

Experiment: NLN

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_00784 and MPMX19_00785 are separated by 485 nucleotidesMPMX19_00785 and MPMX19_00786 are separated by 234 nucleotides MPMX19_00784: MPMX19_00784 - Biotin carboxylase, at 802,154 to 803,494 _00784 MPMX19_00785: MPMX19_00785 - hypothetical protein, at 803,980 to 806,463 _00785 MPMX19_00786: MPMX19_00786 - Adaptive-response sensory-kinase SasA, at 806,698 to 808,338 _00786 Position (kb) 803 804 805 806 807Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 803.653 kb on - strandat 803.744 kb on + strandat 803.826 kb on + strandat 803.835 kb on + strandat 803.835 kb on + strandat 803.835 kb on + strandat 803.836 kb on - strandat 803.836 kb on - strandat 803.836 kb on - strandat 803.836 kb on - strandat 803.836 kb on - strandat 803.836 kb on - strandat 803.856 kb on - strandat 803.856 kb on - strandat 803.856 kb on - strandat 803.856 kb on - strandat 804.106 kb on + strandat 804.256 kb on + strand, within MPMX19_00785at 804.256 kb on + strand, within MPMX19_00785at 804.256 kb on + strand, within MPMX19_00785at 804.256 kb on + strand, within MPMX19_00785at 804.256 kb on + strand, within MPMX19_00785at 804.256 kb on + strand, within MPMX19_00785at 804.256 kb on + strand, within MPMX19_00785at 804.256 kb on + strand, within MPMX19_00785at 804.256 kb on + strand, within MPMX19_00785at 804.256 kb on + strand, within MPMX19_00785at 804.256 kb on + strand, within MPMX19_00785at 804.256 kb on + strand, within MPMX19_00785at 804.256 kb on + strand, within MPMX19_00785at 804.256 kb on + strand, within MPMX19_00785at 804.256 kb on + strand, within MPMX19_00785at 804.256 kb on + strand, within MPMX19_00785at 804.257 kb on - strand, within MPMX19_00785at 804.257 kb on - strand, within MPMX19_00785at 804.257 kb on - strand, within MPMX19_00785at 804.257 kb on - strand, within MPMX19_00785at 804.257 kb on - strand, within MPMX19_00785at 804.257 kb on - strand, within MPMX19_00785at 804.257 kb on - strand, within MPMX19_00785at 804.257 kb on - strand, within MPMX19_00785at 804.257 kb on - strand, within MPMX19_00785at 804.257 kb on - strand, within MPMX19_00785at 804.257 kb on - strand, within MPMX19_00785at 804.257 kb on - strand, within MPMX19_00785at 804.257 kb on - strand, within MPMX19_00785at 804.257 kb on - strand, within MPMX19_00785at 804.367 kb on + strand, within MPMX19_00785at 804.368 kb on - strand, within MPMX19_00785at 804.368 kb on - strand, within MPMX19_00785at 804.368 kb on - strand, within MPMX19_00785at 804.368 kb on - strand, within MPMX19_00785at 804.368 kb on - strand, within MPMX19_00785at 804.580 kb on + strand, within MPMX19_00785at 804.580 kb on + strand, within MPMX19_00785at 804.580 kb on + strand, within MPMX19_00785at 804.580 kb on + strand, within MPMX19_00785at 804.580 kb on + strand, within MPMX19_00785at 804.580 kb on + strand, within MPMX19_00785at 804.580 kb on + strand, within MPMX19_00785at 804.580 kb on + strand, within MPMX19_00785at 804.580 kb on + strand, within MPMX19_00785at 804.581 kb on - strand, within MPMX19_00785at 804.581 kb on - strand, within MPMX19_00785at 804.581 kb on - strand, within MPMX19_00785at 804.581 kb on - strand, within MPMX19_00785at 804.581 kb on - strand, within MPMX19_00785at 804.581 kb on - strand, within MPMX19_00785at 804.581 kb on - strand, within MPMX19_00785at 804.581 kb on - strand, within MPMX19_00785at 804.581 kb on - strand, within MPMX19_00785at 804.581 kb on - strand, within MPMX19_00785at 804.591 kb on + strand, within MPMX19_00785at 804.591 kb on + strand, within MPMX19_00785at 804.591 kb on + strand, within MPMX19_00785at 804.591 kb on + strand, within MPMX19_00785at 804.591 kb on + strand, within MPMX19_00785at 804.591 kb on + strand, within MPMX19_00785at 804.592 kb on - strand, within MPMX19_00785at 804.592 kb on - strand, within MPMX19_00785at 804.592 kb on - strand, within MPMX19_00785at 804.592 kb on - strand, within MPMX19_00785at 804.592 kb on - strand, within MPMX19_00785at 804.630 kb on + strand, within MPMX19_00785at 804.630 kb on + strand, within MPMX19_00785at 804.630 kb on + strand, within MPMX19_00785at 804.630 kb on + strand, within MPMX19_00785at 804.630 kb on + strand, within MPMX19_00785at 804.630 kb on + strand, within MPMX19_00785at 804.630 kb on + strand, within MPMX19_00785at 804.630 kb on + strand, within MPMX19_00785at 804.630 kb on + strand, within MPMX19_00785at 804.630 kb on + strand, within MPMX19_00785at 804.630 kb on + strand, within MPMX19_00785at 804.630 kb on + strand, within MPMX19_00785at 804.631 kb on - strand, within MPMX19_00785at 804.631 kb on - strand, within MPMX19_00785at 804.631 kb on - strand, within MPMX19_00785at 804.631 kb on - strand, within MPMX19_00785at 804.631 kb on - strand, within MPMX19_00785at 804.631 kb on - strand, within MPMX19_00785at 804.631 kb on - strand, within MPMX19_00785at 804.631 kb on - strand, within MPMX19_00785at 804.631 kb on - strand, within MPMX19_00785at 804.631 kb on - strand, within MPMX19_00785at 804.631 kb on - strand, within MPMX19_00785at 804.763 kb on + strand, within MPMX19_00785at 804.763 kb on + strand, within MPMX19_00785at 804.763 kb on + strand, within MPMX19_00785at 804.763 kb on + strand, within MPMX19_00785at 804.763 kb on + strand, within MPMX19_00785at 804.764 kb on - strand, within MPMX19_00785at 804.764 kb on - strand, within MPMX19_00785at 804.764 kb on - strand, within MPMX19_00785at 804.764 kb on - strand, within MPMX19_00785at 804.764 kb on - strand, within MPMX19_00785at 804.764 kb on - strand, within MPMX19_00785at 804.764 kb on - strand, within MPMX19_00785at 804.764 kb on - strand, within MPMX19_00785at 804.764 kb on - strand, within MPMX19_00785at 804.994 kb on + strand, within MPMX19_00785at 804.994 kb on + strand, within MPMX19_00785at 804.994 kb on + strand, within MPMX19_00785at 804.994 kb on + strand, within MPMX19_00785at 804.994 kb on + strand, within MPMX19_00785at 804.994 kb on + strand, within MPMX19_00785at 804.994 kb on + strand, within MPMX19_00785at 804.994 kb on + strand, within MPMX19_00785at 804.994 kb on + strand, within MPMX19_00785at 804.994 kb on + strand, within MPMX19_00785at 804.994 kb on + strand, within MPMX19_00785at 804.994 kb on + strand, within MPMX19_00785at 804.994 kb on + strand, within MPMX19_00785at 804.994 kb on + strand, within MPMX19_00785at 804.994 kb on + strand, within MPMX19_00785at 804.994 kb on + strand, within MPMX19_00785at 804.995 kb on - strand, within MPMX19_00785at 804.995 kb on - strand, within MPMX19_00785at 804.995 kb on - strand, within MPMX19_00785at 804.995 kb on - strand, within MPMX19_00785at 804.995 kb on - strand, within MPMX19_00785at 804.995 kb on - strand, within MPMX19_00785at 804.995 kb on - strand, within MPMX19_00785at 804.995 kb on - strand, within MPMX19_00785at 804.995 kb on - strand, within MPMX19_00785at 804.995 kb on - strand, within MPMX19_00785at 804.995 kb on - strand, within MPMX19_00785at 804.995 kb on - strand, within MPMX19_00785at 804.995 kb on - strand, within MPMX19_00785at 804.995 kb on - strand, within MPMX19_00785at 804.995 kb on - strand, within MPMX19_00785at 804.995 kb on - strand, within MPMX19_00785at 804.995 kb on - strand, within MPMX19_00785at 805.243 kb on + strand, within MPMX19_00785at 805.243 kb on + strand, within MPMX19_00785at 805.243 kb on + strand, within MPMX19_00785at 805.243 kb on + strand, within MPMX19_00785at 805.243 kb on + strand, within MPMX19_00785at 805.243 kb on + strand, within MPMX19_00785at 805.244 kb on - strand, within MPMX19_00785at 805.244 kb on - strand, within MPMX19_00785at 805.244 kb on - strand, within MPMX19_00785at 805.244 kb on - strand, within MPMX19_00785at 805.244 kb on - strand, within MPMX19_00785at 805.244 kb on - strand, within MPMX19_00785at 805.244 kb on - strand, within MPMX19_00785at 805.244 kb on - strand, within MPMX19_00785at 805.244 kb on - strand, within MPMX19_00785at 805.244 kb on - strand, within MPMX19_00785at 805.244 kb on - strand, within MPMX19_00785at 805.244 kb on - strand, within MPMX19_00785at 805.244 kb on - strand, within MPMX19_00785at 805.244 kb on - strand, within MPMX19_00785at 805.244 kb on - strand, within MPMX19_00785at 805.993 kb on + strand, within MPMX19_00785at 805.993 kb on + strand, within MPMX19_00785at 805.993 kb on + strand, within MPMX19_00785at 805.993 kb on + strand, within MPMX19_00785at 805.993 kb on + strand, within MPMX19_00785at 805.994 kb on - strand, within MPMX19_00785at 805.994 kb on - strand, within MPMX19_00785at 805.994 kb on - strand, within MPMX19_00785at 806.317 kb on + strandat 806.516 kb on + strandat 806.516 kb on + strandat 806.517 kb on - strandat 806.517 kb on - strandat 806.549 kb on + strandat 806.550 kb on - strandat 806.597 kb on + strandat 806.597 kb on + strandat 806.597 kb on + strandat 806.598 kb on - strandat 806.651 kb on + strandat 806.651 kb on + strandat 806.652 kb on - strandat 806.824 kb on + strandat 806.824 kb on + strandat 806.824 kb on + strandat 806.824 kb on + strandat 806.824 kb on + strandat 806.824 kb on + strandat 806.824 kb on + strandat 806.825 kb on - strandat 806.825 kb on - strandat 806.825 kb on - strandat 806.825 kb on - strandat 806.825 kb on - strandat 806.825 kb on - strandat 806.825 kb on - strandat 806.825 kb on - strandat 806.825 kb on - strandat 806.825 kb on - strandat 806.825 kb on - strandat 806.825 kb on - strandat 806.825 kb on - strandat 806.825 kb on - strandat 806.845 kb on + strandat 806.845 kb on + strandat 806.845 kb on + strandat 806.845 kb on + strandat 806.845 kb on + strandat 806.845 kb on + strandat 806.845 kb on + strandat 806.845 kb on + strandat 806.845 kb on + strandat 806.845 kb on + strandat 806.845 kb on + strandat 806.845 kb on + strandat 806.845 kb on + strandat 806.845 kb on + strandat 806.845 kb on + strandat 806.846 kb on - strandat 806.846 kb on - strandat 806.846 kb on - strandat 806.846 kb on - strandat 806.846 kb on - strandat 806.846 kb on - strandat 806.846 kb on - strandat 806.846 kb on - strandat 806.846 kb on - strandat 806.846 kb on - strandat 807.016 kb on + strand, within MPMX19_00786at 807.165 kb on + strand, within MPMX19_00786at 807.457 kb on + strand, within MPMX19_00786at 807.457 kb on + strand, within MPMX19_00786at 807.457 kb on + strand, within MPMX19_00786at 807.457 kb on + strand, within MPMX19_00786at 807.457 kb on + strand, within MPMX19_00786at 807.457 kb on + strand, within MPMX19_00786

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Per-strain Table

Position Strand Gene LocusTag Fraction NLN
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803,653 - -1.5
803,744 + +0.4
803,826 + -1.1
803,835 + -0.6
803,835 + -0.2
803,835 + +0.8
803,836 - -2.2
803,836 - +0.4
803,836 - +0.8
803,836 - -1.0
803,836 - -0.6
803,836 - -0.6
803,856 - +1.4
803,856 - -0.2
803,856 - -0.4
803,856 - -1.0
804,106 + +0.6
804,256 + MPMX19_00785 0.11 +0.9
804,256 + MPMX19_00785 0.11 -0.4
804,256 + MPMX19_00785 0.11 -0.4
804,256 + MPMX19_00785 0.11 -0.4
804,256 + MPMX19_00785 0.11 +1.0
804,256 + MPMX19_00785 0.11 -0.0
804,256 + MPMX19_00785 0.11 +0.0
804,256 + MPMX19_00785 0.11 -0.6
804,256 + MPMX19_00785 0.11 -0.6
804,256 + MPMX19_00785 0.11 -1.6
804,256 + MPMX19_00785 0.11 -1.6
804,256 + MPMX19_00785 0.11 -1.0
804,256 + MPMX19_00785 0.11 -0.8
804,256 + MPMX19_00785 0.11 -0.3
804,256 + MPMX19_00785 0.11 +0.6
804,256 + MPMX19_00785 0.11 -1.0
804,257 - MPMX19_00785 0.11 -0.2
804,257 - MPMX19_00785 0.11 +0.2
804,257 - MPMX19_00785 0.11 +1.1
804,257 - MPMX19_00785 0.11 -0.9
804,257 - MPMX19_00785 0.11 +0.2
804,257 - MPMX19_00785 0.11 +0.4
804,257 - MPMX19_00785 0.11 +0.4
804,257 - MPMX19_00785 0.11 -0.6
804,257 - MPMX19_00785 0.11 -0.5
804,257 - MPMX19_00785 0.11 +0.6
804,257 - MPMX19_00785 0.11 +0.9
804,257 - MPMX19_00785 0.11 +1.4
804,257 - MPMX19_00785 0.11 +0.6
804,257 - MPMX19_00785 0.11 -1.2
804,367 + MPMX19_00785 0.16 -1.4
804,368 - MPMX19_00785 0.16 +0.4
804,368 - MPMX19_00785 0.16 -1.6
804,368 - MPMX19_00785 0.16 -2.0
804,368 - MPMX19_00785 0.16 -0.2
804,368 - MPMX19_00785 0.16 -1.4
804,580 + MPMX19_00785 0.24 -0.3
804,580 + MPMX19_00785 0.24 +0.4
804,580 + MPMX19_00785 0.24 -0.4
804,580 + MPMX19_00785 0.24 +0.6
804,580 + MPMX19_00785 0.24 +0.9
804,580 + MPMX19_00785 0.24 -1.2
804,580 + MPMX19_00785 0.24 +0.7
804,580 + MPMX19_00785 0.24 -0.5
804,580 + MPMX19_00785 0.24 +0.4
804,581 - MPMX19_00785 0.24 +0.6
804,581 - MPMX19_00785 0.24 +0.0
804,581 - MPMX19_00785 0.24 +1.1
804,581 - MPMX19_00785 0.24 -0.7
804,581 - MPMX19_00785 0.24 -0.2
804,581 - MPMX19_00785 0.24 -0.2
804,581 - MPMX19_00785 0.24 -1.1
804,581 - MPMX19_00785 0.24 +0.4
804,581 - MPMX19_00785 0.24 +0.7
804,581 - MPMX19_00785 0.24 -0.8
804,591 + MPMX19_00785 0.25 -0.6
804,591 + MPMX19_00785 0.25 +0.0
804,591 + MPMX19_00785 0.25 -0.6
804,591 + MPMX19_00785 0.25 -0.4
804,591 + MPMX19_00785 0.25 -0.2
804,591 + MPMX19_00785 0.25 -0.2
804,592 - MPMX19_00785 0.25 +0.8
804,592 - MPMX19_00785 0.25 -0.0
804,592 - MPMX19_00785 0.25 -0.6
804,592 - MPMX19_00785 0.25 -0.4
804,592 - MPMX19_00785 0.25 +1.7
804,630 + MPMX19_00785 0.26 -0.5
804,630 + MPMX19_00785 0.26 +0.3
804,630 + MPMX19_00785 0.26 -1.6
804,630 + MPMX19_00785 0.26 +1.1
804,630 + MPMX19_00785 0.26 -1.5
804,630 + MPMX19_00785 0.26 -1.1
804,630 + MPMX19_00785 0.26 -1.0
804,630 + MPMX19_00785 0.26 +1.1
804,630 + MPMX19_00785 0.26 +1.7
804,630 + MPMX19_00785 0.26 -0.5
804,630 + MPMX19_00785 0.26 -0.6
804,630 + MPMX19_00785 0.26 -0.6
804,631 - MPMX19_00785 0.26 -0.6
804,631 - MPMX19_00785 0.26 -1.8
804,631 - MPMX19_00785 0.26 +0.4
804,631 - MPMX19_00785 0.26 -0.6
804,631 - MPMX19_00785 0.26 +0.1
804,631 - MPMX19_00785 0.26 -0.5
804,631 - MPMX19_00785 0.26 +1.9
804,631 - MPMX19_00785 0.26 -0.6
804,631 - MPMX19_00785 0.26 -0.2
804,631 - MPMX19_00785 0.26 -0.2
804,631 - MPMX19_00785 0.26 -0.6
804,763 + MPMX19_00785 0.32 -0.2
804,763 + MPMX19_00785 0.32 +0.7
804,763 + MPMX19_00785 0.32 -0.3
804,763 + MPMX19_00785 0.32 +0.7
804,763 + MPMX19_00785 0.32 -0.7
804,764 - MPMX19_00785 0.32 -1.2
804,764 - MPMX19_00785 0.32 -0.6
804,764 - MPMX19_00785 0.32 -2.1
804,764 - MPMX19_00785 0.32 -0.8
804,764 - MPMX19_00785 0.32 -0.3
804,764 - MPMX19_00785 0.32 +0.0
804,764 - MPMX19_00785 0.32 +0.2
804,764 - MPMX19_00785 0.32 +0.9
804,764 - MPMX19_00785 0.32 -1.6
804,994 + MPMX19_00785 0.41 -0.2
804,994 + MPMX19_00785 0.41 +0.5
804,994 + MPMX19_00785 0.41 -0.4
804,994 + MPMX19_00785 0.41 +0.2
804,994 + MPMX19_00785 0.41 +0.8
804,994 + MPMX19_00785 0.41 -0.4
804,994 + MPMX19_00785 0.41 +0.8
804,994 + MPMX19_00785 0.41 +0.1
804,994 + MPMX19_00785 0.41 +0.1
804,994 + MPMX19_00785 0.41 +1.4
804,994 + MPMX19_00785 0.41 -0.2
804,994 + MPMX19_00785 0.41 +0.0
804,994 + MPMX19_00785 0.41 -1.6
804,994 + MPMX19_00785 0.41 +0.0
804,994 + MPMX19_00785 0.41 -0.3
804,994 + MPMX19_00785 0.41 -0.4
804,995 - MPMX19_00785 0.41 -0.2
804,995 - MPMX19_00785 0.41 +0.5
804,995 - MPMX19_00785 0.41 +0.5
804,995 - MPMX19_00785 0.41 -0.8
804,995 - MPMX19_00785 0.41 +0.4
804,995 - MPMX19_00785 0.41 +1.1
804,995 - MPMX19_00785 0.41 +2.7
804,995 - MPMX19_00785 0.41 -1.2
804,995 - MPMX19_00785 0.41 +0.6
804,995 - MPMX19_00785 0.41 -0.4
804,995 - MPMX19_00785 0.41 -2.3
804,995 - MPMX19_00785 0.41 -2.4
804,995 - MPMX19_00785 0.41 +0.8
804,995 - MPMX19_00785 0.41 -1.0
804,995 - MPMX19_00785 0.41 +1.0
804,995 - MPMX19_00785 0.41 -0.6
804,995 - MPMX19_00785 0.41 -0.2
805,243 + MPMX19_00785 0.51 +0.4
805,243 + MPMX19_00785 0.51 -3.0
805,243 + MPMX19_00785 0.51 +0.6
805,243 + MPMX19_00785 0.51 +0.4
805,243 + MPMX19_00785 0.51 +0.1
805,243 + MPMX19_00785 0.51 -0.4
805,244 - MPMX19_00785 0.51 +1.0
805,244 - MPMX19_00785 0.51 +0.9
805,244 - MPMX19_00785 0.51 -2.0
805,244 - MPMX19_00785 0.51 -0.4
805,244 - MPMX19_00785 0.51 +0.1
805,244 - MPMX19_00785 0.51 +0.2
805,244 - MPMX19_00785 0.51 -0.4
805,244 - MPMX19_00785 0.51 -1.0
805,244 - MPMX19_00785 0.51 +0.2
805,244 - MPMX19_00785 0.51 +0.0
805,244 - MPMX19_00785 0.51 -1.1
805,244 - MPMX19_00785 0.51 +0.4
805,244 - MPMX19_00785 0.51 -0.6
805,244 - MPMX19_00785 0.51 +2.4
805,244 - MPMX19_00785 0.51 +0.9
805,993 + MPMX19_00785 0.81 -0.2
805,993 + MPMX19_00785 0.81 -1.9
805,993 + MPMX19_00785 0.81 +0.4
805,993 + MPMX19_00785 0.81 -1.6
805,993 + MPMX19_00785 0.81 -1.0
805,994 - MPMX19_00785 0.81 +0.0
805,994 - MPMX19_00785 0.81 -0.4
805,994 - MPMX19_00785 0.81 -1.0
806,317 + +0.7
806,516 + -0.2
806,516 + -0.8
806,517 - +0.9
806,517 - +0.0
806,549 + -0.4
806,550 - -1.1
806,597 + +1.5
806,597 + +0.1
806,597 + +0.7
806,598 - +0.6
806,651 + +0.9
806,651 + +1.9
806,652 - -0.2
806,824 + -0.9
806,824 + -1.0
806,824 + -1.1
806,824 + +0.5
806,824 + -0.7
806,824 + -0.9
806,824 + -0.4
806,825 - -0.1
806,825 - -1.5
806,825 - +0.2
806,825 - -0.8
806,825 - -1.0
806,825 - +0.4
806,825 - +1.2
806,825 - -0.1
806,825 - -0.5
806,825 - -1.6
806,825 - +0.4
806,825 - -1.1
806,825 - -0.6
806,825 - +0.1
806,845 + -0.4
806,845 + -1.1
806,845 + +1.0
806,845 + +0.8
806,845 + +1.1
806,845 + +1.2
806,845 + -0.5
806,845 + -0.8
806,845 + +0.7
806,845 + -1.5
806,845 + -0.1
806,845 + +0.1
806,845 + -0.4
806,845 + +0.1
806,845 + +0.9
806,846 - -0.8
806,846 - -0.0
806,846 - -0.1
806,846 - +0.2
806,846 - +0.2
806,846 - +0.7
806,846 - +0.4
806,846 - +0.0
806,846 - -2.6
806,846 - -1.4
807,016 + MPMX19_00786 0.19 -0.3
807,165 + MPMX19_00786 0.28 -0.2
807,457 + MPMX19_00786 0.46 +0.1
807,457 + MPMX19_00786 0.46 +0.9
807,457 + MPMX19_00786 0.46 -1.1
807,457 + MPMX19_00786 0.46 -0.5
807,457 + MPMX19_00786 0.46 +0.0
807,457 + MPMX19_00786 0.46 -0.3

Or see this region's nucleotide sequence