Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00763 and MPMX19_00764 are separated by 261 nucleotides MPMX19_00764 and MPMX19_00765 overlap by 1 nucleotides MPMX19_00765 and MPMX19_00766 are separated by 81 nucleotides MPMX19_00766 and MPMX19_00767 are separated by 168 nucleotides
MPMX19_00763: MPMX19_00763 - hypothetical protein, at 779,412 to 781,043
_00763
MPMX19_00764: MPMX19_00764 - ECF RNA polymerase sigma factor EcfG, at 781,305 to 781,814
_00764
MPMX19_00765: MPMX19_00765 - hypothetical protein, at 781,814 to 782,770
_00765
MPMX19_00766: MPMX19_00766 - hypothetical protein, at 782,852 to 783,496
_00766
MPMX19_00767: MPMX19_00767 - hypothetical protein, at 783,665 to 784,492
_00767
Position (kb) 781
782
783 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 780.925 kb on - strand at 780.943 kb on - strand at 780.943 kb on - strand at 781.111 kb on + strand at 781.111 kb on + strand at 781.111 kb on + strand at 781.111 kb on + strand at 781.111 kb on + strand at 781.111 kb on + strand at 781.111 kb on + strand at 781.112 kb on - strand at 781.112 kb on - strand at 781.112 kb on - strand at 781.112 kb on - strand at 781.112 kb on - strand at 781.112 kb on - strand at 781.112 kb on - strand at 781.123 kb on + strand at 781.123 kb on + strand at 781.124 kb on - strand at 781.124 kb on - strand at 781.124 kb on - strand at 781.124 kb on - strand at 781.124 kb on - strand at 781.153 kb on + strand at 781.153 kb on + strand at 781.153 kb on + strand at 781.153 kb on + strand at 781.153 kb on + strand at 781.153 kb on + strand at 781.153 kb on + strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.154 kb on - strand at 781.288 kb on - strand at 781.686 kb on + strand, within MPMX19_00764 at 781.686 kb on + strand, within MPMX19_00764 at 781.686 kb on + strand, within MPMX19_00764 at 781.687 kb on - strand, within MPMX19_00764 at 781.687 kb on - strand, within MPMX19_00764 at 781.687 kb on - strand, within MPMX19_00764 at 781.687 kb on - strand, within MPMX19_00764 at 781.793 kb on + strand at 782.836 kb on + strand at 782.836 kb on + strand at 782.836 kb on + strand at 782.836 kb on + strand at 782.836 kb on + strand at 782.836 kb on + strand at 782.837 kb on - strand at 782.837 kb on - strand at 782.837 kb on - strand at 782.837 kb on - strand at 782.837 kb on - strand at 782.853 kb on + strand at 782.868 kb on + strand at 782.868 kb on + strand at 782.868 kb on + strand at 782.868 kb on + strand at 782.868 kb on + strand at 782.868 kb on + strand at 782.868 kb on + strand at 782.868 kb on + strand at 782.868 kb on + strand at 782.868 kb on + strand at 782.868 kb on + strand at 782.868 kb on + strand at 782.869 kb on - strand at 782.869 kb on - strand at 782.869 kb on - strand at 782.869 kb on - strand at 782.869 kb on - strand at 782.869 kb on - strand at 782.869 kb on - strand at 782.869 kb on - strand at 782.869 kb on - strand at 782.869 kb on - strand at 782.869 kb on - strand at 783.076 kb on - strand, within MPMX19_00766 at 783.318 kb on + strand, within MPMX19_00766 at 783.399 kb on + strand, within MPMX19_00766 at 783.399 kb on + strand, within MPMX19_00766 at 783.399 kb on + strand, within MPMX19_00766 at 783.400 kb on - strand, within MPMX19_00766 at 783.400 kb on - strand, within MPMX19_00766 at 783.560 kb on + strand at 783.560 kb on + strand at 783.560 kb on + strand at 783.560 kb on + strand at 783.560 kb on + strand at 783.560 kb on + strand at 783.560 kb on + strand at 783.561 kb on - strand at 783.561 kb on - strand at 783.561 kb on - strand at 783.561 kb on - strand at 783.572 kb on + strand at 783.572 kb on + strand at 783.572 kb on + strand at 783.572 kb on + strand at 783.572 kb on + strand at 783.572 kb on + strand at 783.572 kb on + strand at 783.573 kb on - strand at 783.573 kb on - strand at 783.573 kb on - strand at 783.573 kb on - strand at 783.573 kb on - strand at 783.573 kb on - strand at 783.573 kb on - strand at 783.573 kb on - strand at 783.573 kb on - strand at 783.573 kb on - strand at 783.584 kb on + strand at 783.584 kb on + strand at 783.584 kb on + strand at 783.584 kb on + strand at 783.584 kb on + strand at 783.584 kb on + strand at 783.584 kb on + strand at 783.584 kb on + strand at 783.584 kb on + strand at 783.584 kb on + strand at 783.584 kb on + strand at 783.585 kb on - strand at 783.585 kb on - strand at 783.585 kb on - strand at 783.585 kb on - strand at 783.585 kb on - strand at 783.585 kb on - strand at 783.585 kb on - strand at 783.585 kb on - strand at 783.585 kb on - strand at 783.634 kb on + strand at 783.634 kb on + strand at 783.634 kb on + strand at 783.635 kb on - strand at 783.635 kb on - strand at 783.635 kb on - strand at 783.635 kb on - strand at 783.635 kb on - strand at 783.635 kb on - strand at 783.635 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 780,925 - -0.5 780,943 - +0.4 780,943 - +0.0 781,111 + -1.6 781,111 + +0.2 781,111 + +0.0 781,111 + +0.1 781,111 + +0.7 781,111 + -0.5 781,111 + +0.1 781,112 - +0.9 781,112 - -0.1 781,112 - -2.0 781,112 - -0.3 781,112 - +0.4 781,112 - -0.4 781,112 - -0.4 781,123 + +0.9 781,123 + +0.8 781,124 - +1.0 781,124 - -0.2 781,124 - -1.6 781,124 - -0.1 781,124 - -1.0 781,153 + +0.7 781,153 + -1.9 781,153 + -0.2 781,153 + +0.8 781,153 + +1.0 781,153 + +2.0 781,153 + -0.2 781,154 - -0.4 781,154 - -0.4 781,154 - +1.4 781,154 - +0.6 781,154 - -1.2 781,154 - +0.2 781,154 - +0.4 781,154 - -1.1 781,154 - -0.4 781,154 - +0.0 781,154 - -0.4 781,288 - -0.4 781,686 + MPMX19_00764 0.75 -0.1 781,686 + MPMX19_00764 0.75 -0.1 781,686 + MPMX19_00764 0.75 -0.0 781,687 - MPMX19_00764 0.75 +1.8 781,687 - MPMX19_00764 0.75 +0.4 781,687 - MPMX19_00764 0.75 +0.2 781,687 - MPMX19_00764 0.75 +0.4 781,793 + -0.5 782,836 + -2.0 782,836 + -1.0 782,836 + +0.9 782,836 + +0.2 782,836 + +0.9 782,836 + -0.6 782,837 - +1.0 782,837 - -0.3 782,837 - +0.4 782,837 - +0.4 782,837 - -0.6 782,853 + -1.2 782,868 + -1.2 782,868 + -1.1 782,868 + +1.6 782,868 + -1.1 782,868 + -1.8 782,868 + -0.8 782,868 + +0.1 782,868 + +0.9 782,868 + +0.2 782,868 + +0.0 782,868 + -0.1 782,868 + -2.0 782,869 - +0.4 782,869 - -1.4 782,869 - -0.6 782,869 - +0.6 782,869 - -0.8 782,869 - -0.3 782,869 - +0.1 782,869 - +0.4 782,869 - +1.4 782,869 - -0.6 782,869 - -1.1 783,076 - MPMX19_00766 0.35 +1.7 783,318 + MPMX19_00766 0.72 +0.0 783,399 + MPMX19_00766 0.85 +0.4 783,399 + MPMX19_00766 0.85 +0.1 783,399 + MPMX19_00766 0.85 -0.2 783,400 - MPMX19_00766 0.85 +0.6 783,400 - MPMX19_00766 0.85 +0.4 783,560 + -2.4 783,560 + -2.2 783,560 + +0.1 783,560 + -0.1 783,560 + -3.5 783,560 + +0.4 783,560 + -0.3 783,561 - +0.2 783,561 - -1.1 783,561 - -0.5 783,561 - -0.1 783,572 + -0.6 783,572 + -0.5 783,572 + +1.1 783,572 + +1.1 783,572 + +1.2 783,572 + -1.0 783,572 + +2.2 783,573 - -1.2 783,573 - -1.5 783,573 - +0.6 783,573 - +0.4 783,573 - -2.4 783,573 - +0.4 783,573 - -0.0 783,573 - +0.0 783,573 - +0.6 783,573 - +0.1 783,584 + -1.5 783,584 + +0.3 783,584 + -1.0 783,584 + -0.1 783,584 + -2.0 783,584 + +0.9 783,584 + +0.2 783,584 + -0.1 783,584 + -0.7 783,584 + +0.5 783,584 + -0.5 783,585 - -1.0 783,585 - -0.2 783,585 - -0.2 783,585 - -0.2 783,585 - +0.0 783,585 - -0.9 783,585 - +0.2 783,585 - -2.4 783,585 - +0.2 783,634 + -1.3 783,634 + -1.2 783,634 + -0.7 783,635 - -0.1 783,635 - -0.6 783,635 - -0.4 783,635 - +1.4 783,635 - +0.4 783,635 - -0.1 783,635 - -1.2
Or see this region's nucleotide sequence