Strain Fitness in Escherichia coli ECRC101 around MCAODC_12980

Experiment: WM_Bas09

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_Bas09
2,575,484	-	emrY	MCAODC_12975	0.54	+0.4
2,575,545	+	emrY	MCAODC_12975	0.58	+0.4
2,575,565	+	emrY	MCAODC_12975	0.59	-2.2
2,575,567	+	emrY	MCAODC_12975	0.59	+0.1
2,575,644	-	emrY	MCAODC_12975	0.64	-0.4
2,575,753	+	emrY	MCAODC_12975	0.71	+0.4
2,575,864	+	emrY	MCAODC_12975	0.79	+1.1
2,575,904	-	emrY	MCAODC_12975	0.81	-1.8
2,575,945	-	emrY	MCAODC_12975	0.84	-0.1
2,576,022	-	emrY	MCAODC_12975	0.89	+2.8
2,576,024	+	emrY	MCAODC_12975	0.89	+0.5
2,576,128	+				-2.4
2,576,209	+				-0.2
2,576,209	+				-0.2
2,576,210	-				-2.0
2,576,233	+				-2.6
2,576,234	-				+1.0
2,576,234	-				-0.2
2,576,234	-				+0.5
2,576,234	-				-2.2
2,576,298	-				+0.6
2,576,300	+				+0.6
2,576,382	+				-1.6
2,576,382	+				-0.1
2,576,425	+				+0.2
2,576,425	+				-0.3
2,576,425	+				-0.5
2,576,426	-				+0.5
2,576,426	-				+0.3
2,576,426	-				-0.0
2,576,426	-				-0.3
2,576,458	-	dsdA	MCAODC_12980	0.12	-0.4
2,576,488	-	dsdA	MCAODC_12980	0.14	+1.0
2,576,522	+	dsdA	MCAODC_12980	0.17	+0.5
2,576,522	+	dsdA	MCAODC_12980	0.17	-0.2
2,576,522	+	dsdA	MCAODC_12980	0.17	+0.2
2,576,523	-	dsdA	MCAODC_12980	0.17	+0.2
2,576,523	-	dsdA	MCAODC_12980	0.17	-0.0
2,576,523	-	dsdA	MCAODC_12980	0.17	+0.8
2,576,523	-	dsdA	MCAODC_12980	0.17	+1.7
2,576,523	-	dsdA	MCAODC_12980	0.17	+0.6
2,576,544	+	dsdA	MCAODC_12980	0.18	-2.6
2,576,545	-	dsdA	MCAODC_12980	0.19	+1.3
2,576,545	-	dsdA	MCAODC_12980	0.19	+0.9
2,576,546	+	dsdA	MCAODC_12980	0.19	-0.3
2,576,547	-	dsdA	MCAODC_12980	0.19	+0.4
2,576,668	+	dsdA	MCAODC_12980	0.28	+0.8
2,576,669	-	dsdA	MCAODC_12980	0.28	+1.6
2,576,669	-	dsdA	MCAODC_12980	0.28	-0.5
2,576,687	-	dsdA	MCAODC_12980	0.29	+1.0
2,576,694	+	dsdA	MCAODC_12980	0.30	-0.5
2,576,694	+	dsdA	MCAODC_12980	0.30	+0.5
2,576,694	+	dsdA	MCAODC_12980	0.30	-0.2
2,576,694	+	dsdA	MCAODC_12980	0.30	+0.7
2,576,694	+	dsdA	MCAODC_12980	0.30	+0.4
2,576,695	-	dsdA	MCAODC_12980	0.30	-0.3
2,576,695	-	dsdA	MCAODC_12980	0.30	+0.4
2,576,695	-	dsdA	MCAODC_12980	0.30	-0.0
2,576,754	+	dsdA	MCAODC_12980	0.34	+0.8
2,576,755	-	dsdA	MCAODC_12980	0.34	+1.9
2,576,820	+	dsdA	MCAODC_12980	0.39	+0.1
2,576,836	-	dsdA	MCAODC_12980	0.40	-0.8
2,576,955	+	dsdA	MCAODC_12980	0.49	-0.6
2,576,982	-	dsdA	MCAODC_12980	0.51	-0.5
2,576,994	-	dsdA	MCAODC_12980	0.52	-0.1
2,576,994	-	dsdA	MCAODC_12980	0.52	+0.6
2,577,060	+	dsdA	MCAODC_12980	0.57	-0.5
2,577,060	+	dsdA	MCAODC_12980	0.57	-0.5
2,577,060	+	dsdA	MCAODC_12980	0.57	+0.2
2,577,060	+	dsdA	MCAODC_12980	0.57	+0.4
2,577,060	+	dsdA	MCAODC_12980	0.57	+1.1
2,577,060	+	dsdA	MCAODC_12980	0.57	-0.3
2,577,060	+	dsdA	MCAODC_12980	0.57	+0.3
2,577,060	+	dsdA	MCAODC_12980	0.57	-0.3
2,577,061	-	dsdA	MCAODC_12980	0.57	+1.6
2,577,061	-	dsdA	MCAODC_12980	0.57	-1.5
2,577,061	-	dsdA	MCAODC_12980	0.57	+0.0
2,577,061	-	dsdA	MCAODC_12980	0.57	+0.3
2,577,061	-	dsdA	MCAODC_12980	0.57	+0.1
2,577,061	-	dsdA	MCAODC_12980	0.57	-0.1
2,577,061	-	dsdA	MCAODC_12980	0.57	+1.7
2,577,096	+	dsdA	MCAODC_12980	0.60	-0.9
2,577,277	+	dsdA	MCAODC_12980	0.74	-1.0
2,577,344	+	dsdA	MCAODC_12980	0.79	-0.0
2,577,345	-	dsdA	MCAODC_12980	0.79	+0.7
2,577,399	+	dsdA	MCAODC_12980	0.83	+0.1
2,577,443	+	dsdA	MCAODC_12980	0.86	-1.2
2,577,444	-	dsdA	MCAODC_12980	0.86	-0.5
2,577,444	-	dsdA	MCAODC_12980	0.86	-0.3
2,577,444	-	dsdA	MCAODC_12980	0.86	+0.8
2,577,444	-	dsdA	MCAODC_12980	0.86	-0.0
2,577,506	+				+0.1
2,577,507	-				+0.1
2,577,507	-				-2.4
2,577,507	-				+0.3
2,577,507	-				+0.1
2,577,507	-				+0.5
2,577,511	+				+0.1
2,577,511	+				-1.9
2,577,511	+				+0.2
2,577,543	+				-0.1
2,577,561	+				-0.6
2,577,580	+				-0.7
2,577,581	-				-0.1
2,577,591	-				-2.3
2,577,630	+				+0.4
2,577,630	+				-0.6
2,577,630	+				-0.5
2,577,631	-				-0.4
2,577,653	+				+1.4
2,577,654	-				-0.4
2,577,698	+	dsdX	MCAODC_12985	0.24	-2.5
2,577,699	-	dsdX	MCAODC_12985	0.25	+0.6
2,577,715	+	dsdX	MCAODC_12985	0.32	+0.6
2,577,715	+	dsdX	MCAODC_12985	0.32	+0.1
2,577,716	-	dsdX	MCAODC_12985	0.32	-0.3
2,577,719	-	dsdX	MCAODC_12985	0.34	+0.8
2,577,719	-	dsdX	MCAODC_12985	0.34	-1.4
2,577,722	+	dsdX	MCAODC_12985	0.35	-0.1
2,577,722	+	dsdX	MCAODC_12985	0.35	+0.4
2,577,723	-	dsdX	MCAODC_12985	0.36	+0.6
2,577,741	-	dsdX	MCAODC_12985	0.44	+0.6
2,577,751	+	dsdX	MCAODC_12985	0.48	+1.0
2,577,751	+	dsdX	MCAODC_12985	0.48	+0.4
2,577,874	-				+0.5
2,577,877	+				+1.2
2,577,923	+				+1.3
2,577,924	-				-0.9
2,577,931	+				-1.5
2,577,931	+				-2.2
2,577,931	+				-0.6
2,577,931	+				-2.7
2,577,931	+				+0.2
2,577,931	+				+0.8
2,577,931	+				-1.9
2,577,931	+				-0.1
2,577,932	-				-0.3
2,577,932	-				+0.1
2,577,932	-				+0.8
2,577,932	-				-0.2
2,577,932	-				+0.7
2,577,932	-				-0.4
2,577,932	-				-0.9
2,577,932	-				-2.0
2,577,933	+				-0.8
2,577,933	+				+0.7
2,577,934	-				-0.5
2,577,978	-				+0.6
2,577,988	+				+0.5
2,577,989	-				-1.2
2,577,989	-				+0.7
2,578,006	+				-0.1
2,578,007	-				-1.0
2,578,174	+				+0.1
2,578,174	+				+1.2
2,578,175	-				+0.0
2,578,212	+				+0.1
2,578,238	+				-0.0
2,578,238	+				+0.2
2,578,238	+				-0.7
2,578,239	-				-0.6
2,578,282	+	purR	MCAODC_12990	0.14	+0.2
2,578,282	+	purR	MCAODC_12990	0.14	+0.7
2,578,282	+	purR	MCAODC_12990	0.14	+0.8
2,578,283	-	purR	MCAODC_12990	0.14	+2.0
2,578,283	-	purR	MCAODC_12990	0.14	-0.1
2,578,283	-	purR	MCAODC_12990	0.14	+0.1
2,578,322	-	purR	MCAODC_12990	0.18	-3.5
2,578,395	+	purR	MCAODC_12990	0.26	-0.0
2,578,468	+	purR	MCAODC_12990	0.34	-0.6
2,578,468	+	purR	MCAODC_12990	0.34	-0.1
2,578,468	+	purR	MCAODC_12990	0.34	-0.6
2,578,468	+	purR	MCAODC_12990	0.34	-0.6
2,578,469	-	purR	MCAODC_12990	0.34	+1.1
2,578,472	+	purR	MCAODC_12990	0.34	+1.4
2,578,472	+	purR	MCAODC_12990	0.34	-0.3
2,578,472	+	purR	MCAODC_12990	0.34	-1.7
2,578,472	+	purR	MCAODC_12990	0.34	-0.8
2,578,472	+	purR	MCAODC_12990	0.34	-0.5
2,578,472	+	purR	MCAODC_12990	0.34	+0.2
2,578,473	-	purR	MCAODC_12990	0.34	+1.0
2,578,473	-	purR	MCAODC_12990	0.34	+0.2
2,578,477	+	purR	MCAODC_12990	0.34	+0.0
2,578,477	+	purR	MCAODC_12990	0.34	+0.2
2,578,477	+	purR	MCAODC_12990	0.34	+0.1
2,578,478	-	purR	MCAODC_12990	0.35	-0.0
2,578,495	+	purR	MCAODC_12990	0.36	+0.7
2,578,517	+	purR	MCAODC_12990	0.39	-0.9
2,578,518	-	purR	MCAODC_12990	0.39	+0.8
2,578,518	-	purR	MCAODC_12990	0.39	+1.2
2,578,574	+	purR	MCAODC_12990	0.45	-3.7
2,578,574	+	purR	MCAODC_12990	0.45	-0.9
2,578,574	+	purR	MCAODC_12990	0.45	+3.6
2,578,575	-	purR	MCAODC_12990	0.45	+1.7
2,578,575	-	purR	MCAODC_12990	0.45	-0.8
2,578,589	+	purR	MCAODC_12990	0.46	+0.9
2,578,602	-	purR	MCAODC_12990	0.48	+0.1