Experiment: WM_Bas09
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MCAODC_01895 and btsT are separated by 292 nucleotides btsT and yjiX are separated by 49 nucleotides yjiX and yjiA are separated by 10 nucleotides
MCAODC_01895: MCAODC_01895 - hypothetical protein, at 365,863 to 366,405
_01895
MCAODC_01900: btsT - pyruvate/proton symporter BtsT, at 366,698 to 368,848
btsT
MCAODC_01905: yjiX - Uncharacterized protein YjiX, at 368,898 to 369,101
yjiX
MCAODC_01910: yjiA - GTPase, at 369,112 to 370,068
yjiA
Position (kb) 366
367
368
369 Strain fitness (log2 ratio) -2
-1
0
1
2 at 365.764 kb on + strand at 365.765 kb on - strand at 365.926 kb on - strand, within MCAODC_01895 at 365.947 kb on - strand, within MCAODC_01895 at 366.003 kb on + strand, within MCAODC_01895 at 366.004 kb on - strand, within MCAODC_01895 at 366.004 kb on - strand, within MCAODC_01895 at 366.057 kb on + strand, within MCAODC_01895 at 366.058 kb on - strand, within MCAODC_01895 at 366.101 kb on + strand, within MCAODC_01895 at 366.104 kb on + strand, within MCAODC_01895 at 366.105 kb on - strand, within MCAODC_01895 at 366.130 kb on - strand, within MCAODC_01895 at 366.363 kb on + strand at 366.439 kb on + strand at 366.487 kb on - strand at 366.500 kb on - strand at 366.540 kb on + strand at 366.541 kb on - strand at 366.553 kb on + strand at 366.566 kb on - strand at 366.569 kb on + strand at 366.569 kb on + strand at 366.574 kb on + strand at 366.590 kb on - strand at 366.626 kb on + strand at 366.627 kb on - strand at 366.627 kb on - strand at 366.652 kb on - strand at 366.670 kb on + strand at 366.670 kb on + strand at 366.670 kb on + strand at 366.671 kb on - strand at 366.674 kb on - strand at 366.681 kb on - strand at 366.681 kb on - strand at 366.681 kb on - strand at 366.694 kb on + strand at 366.695 kb on - strand at 366.697 kb on + strand at 366.714 kb on + strand at 366.726 kb on + strand at 366.726 kb on + strand at 366.726 kb on + strand at 366.781 kb on - strand at 366.836 kb on + strand at 366.837 kb on - strand at 366.837 kb on - strand at 366.837 kb on - strand at 366.837 kb on - strand at 366.855 kb on - strand at 366.857 kb on + strand at 366.857 kb on + strand at 366.857 kb on + strand at 366.858 kb on - strand at 366.858 kb on - strand at 366.858 kb on - strand at 366.858 kb on - strand at 366.858 kb on - strand at 366.858 kb on - strand at 366.858 kb on - strand at 366.866 kb on + strand at 366.867 kb on - strand at 366.922 kb on + strand, within btsT at 366.941 kb on + strand, within btsT at 366.941 kb on + strand, within btsT at 366.941 kb on + strand, within btsT at 366.942 kb on - strand, within btsT at 366.942 kb on - strand, within btsT at 366.942 kb on - strand, within btsT at 366.942 kb on - strand, within btsT at 366.959 kb on + strand, within btsT at 367.075 kb on - strand, within btsT at 367.102 kb on + strand, within btsT at 367.114 kb on + strand, within btsT at 367.114 kb on + strand, within btsT at 367.115 kb on - strand, within btsT at 367.210 kb on - strand, within btsT at 367.303 kb on - strand, within btsT at 367.318 kb on + strand, within btsT at 367.319 kb on - strand, within btsT at 367.319 kb on - strand, within btsT at 367.328 kb on + strand, within btsT at 367.328 kb on + strand, within btsT at 367.328 kb on + strand, within btsT at 367.328 kb on + strand, within btsT at 367.328 kb on + strand, within btsT at 367.328 kb on + strand, within btsT at 367.328 kb on + strand, within btsT at 367.328 kb on + strand, within btsT at 367.328 kb on + strand, within btsT at 367.329 kb on - strand, within btsT at 367.329 kb on - strand, within btsT at 367.329 kb on - strand, within btsT at 367.329 kb on - strand, within btsT at 367.329 kb on - strand, within btsT at 367.329 kb on - strand, within btsT at 367.329 kb on - strand, within btsT at 367.329 kb on - strand, within btsT at 367.329 kb on - strand, within btsT at 367.329 kb on - strand, within btsT at 367.329 kb on - strand, within btsT at 367.329 kb on - strand, within btsT at 367.329 kb on - strand, within btsT at 367.329 kb on - strand, within btsT at 367.340 kb on - strand, within btsT at 367.373 kb on - strand, within btsT at 367.373 kb on - strand, within btsT at 367.373 kb on - strand, within btsT at 367.399 kb on + strand, within btsT at 367.404 kb on - strand, within btsT at 367.472 kb on - strand, within btsT at 367.472 kb on - strand, within btsT at 367.545 kb on - strand, within btsT at 367.640 kb on + strand, within btsT at 367.640 kb on + strand, within btsT at 367.641 kb on - strand, within btsT at 367.871 kb on + strand, within btsT at 367.872 kb on - strand, within btsT at 367.918 kb on + strand, within btsT at 368.110 kb on - strand, within btsT at 368.407 kb on + strand, within btsT at 368.465 kb on - strand, within btsT at 368.465 kb on - strand, within btsT at 368.483 kb on + strand, within btsT at 368.484 kb on - strand, within btsT at 368.494 kb on - strand, within btsT at 368.521 kb on + strand, within btsT at 368.521 kb on + strand, within btsT at 368.521 kb on + strand, within btsT at 368.522 kb on - strand, within btsT at 368.588 kb on + strand, within btsT at 368.589 kb on - strand, within btsT at 368.603 kb on + strand, within btsT at 368.627 kb on - strand, within btsT at 368.627 kb on - strand, within btsT at 368.636 kb on - strand at 368.636 kb on - strand at 368.681 kb on + strand at 368.681 kb on + strand at 368.681 kb on + strand at 368.681 kb on + strand at 368.681 kb on + strand at 368.682 kb on - strand at 368.682 kb on - strand at 368.682 kb on - strand at 368.682 kb on - strand at 368.682 kb on - strand at 368.682 kb on - strand at 368.701 kb on + strand at 368.723 kb on + strand at 368.723 kb on + strand at 368.723 kb on + strand at 368.724 kb on - strand at 368.767 kb on + strand at 368.768 kb on - strand at 368.768 kb on - strand at 368.768 kb on - strand at 368.768 kb on - strand at 368.782 kb on + strand at 368.801 kb on + strand at 368.801 kb on + strand at 368.801 kb on + strand at 368.801 kb on + strand at 368.802 kb on - strand at 368.802 kb on - strand at 368.802 kb on - strand at 368.802 kb on - strand at 368.857 kb on - strand at 368.897 kb on + strand at 368.897 kb on + strand at 368.897 kb on + strand at 368.897 kb on + strand at 368.897 kb on + strand at 368.898 kb on - strand at 368.898 kb on - strand at 368.898 kb on - strand at 368.898 kb on - strand at 368.906 kb on + strand at 368.911 kb on + strand at 368.911 kb on + strand at 368.911 kb on + strand at 368.911 kb on + strand at 368.912 kb on - strand at 368.912 kb on - strand at 368.971 kb on - strand, within yjiX at 368.979 kb on + strand, within yjiX at 368.979 kb on + strand, within yjiX at 368.979 kb on + strand, within yjiX at 368.979 kb on + strand, within yjiX at 368.979 kb on + strand, within yjiX at 368.979 kb on + strand, within yjiX at 368.979 kb on + strand, within yjiX at 368.980 kb on - strand, within yjiX at 368.980 kb on - strand, within yjiX at 368.980 kb on - strand, within yjiX at 368.980 kb on - strand, within yjiX at 368.980 kb on - strand, within yjiX at 368.980 kb on - strand, within yjiX at 368.990 kb on + strand, within yjiX at 368.990 kb on + strand, within yjiX at 368.990 kb on + strand, within yjiX at 369.018 kb on + strand, within yjiX at 369.018 kb on + strand, within yjiX at 369.018 kb on + strand, within yjiX at 369.018 kb on + strand, within yjiX at 369.018 kb on + strand, within yjiX at 369.019 kb on - strand, within yjiX at 369.028 kb on - strand, within yjiX at 369.028 kb on - strand, within yjiX at 369.077 kb on + strand, within yjiX at 369.078 kb on - strand, within yjiX at 369.130 kb on - strand at 369.150 kb on - strand at 369.181 kb on - strand at 369.181 kb on - strand at 369.203 kb on - strand at 369.342 kb on - strand, within yjiA at 369.342 kb on - strand, within yjiA at 369.366 kb on + strand, within yjiA at 369.376 kb on - strand, within yjiA at 369.376 kb on - strand, within yjiA at 369.462 kb on - strand, within yjiA at 369.473 kb on - strand, within yjiA at 369.509 kb on + strand, within yjiA at 369.509 kb on + strand, within yjiA at 369.510 kb on - strand, within yjiA at 369.573 kb on + strand, within yjiA at 369.715 kb on - strand, within yjiA at 369.781 kb on - strand, within yjiA at 369.797 kb on + strand, within yjiA at 369.815 kb on + strand, within yjiA at 369.816 kb on - strand, within yjiA at 369.820 kb on - strand, within yjiA
Per-strain Table
Position Strand Gene LocusTag Fraction WM_Bas09 remove 365,764 + -0.0 365,765 - +0.2 365,926 - MCAODC_01895 0.12 -0.4 365,947 - MCAODC_01895 0.15 -0.9 366,003 + MCAODC_01895 0.26 +0.2 366,004 - MCAODC_01895 0.26 -2.3 366,004 - MCAODC_01895 0.26 +1.5 366,057 + MCAODC_01895 0.36 -1.5 366,058 - MCAODC_01895 0.36 -0.7 366,101 + MCAODC_01895 0.44 +0.6 366,104 + MCAODC_01895 0.44 -0.1 366,105 - MCAODC_01895 0.45 -0.2 366,130 - MCAODC_01895 0.49 -0.6 366,363 + -0.3 366,439 + -0.4 366,487 - -0.9 366,500 - +0.5 366,540 + +0.8 366,541 - +0.2 366,553 + -0.6 366,566 - -0.2 366,569 + -0.6 366,569 + +1.1 366,574 + +1.7 366,590 - +0.3 366,626 + +0.5 366,627 - -0.6 366,627 - +0.8 366,652 - -0.0 366,670 + +0.2 366,670 + -2.7 366,670 + -0.3 366,671 - +0.1 366,674 - +0.8 366,681 - +1.0 366,681 - +0.6 366,681 - +1.4 366,694 + +0.1 366,695 - +0.1 366,697 + -0.4 366,714 + +1.2 366,726 + -0.1 366,726 + -0.3 366,726 + -0.0 366,781 - -1.9 366,836 + +0.5 366,837 - -1.5 366,837 - -1.7 366,837 - -0.1 366,837 - +0.7 366,855 - +0.6 366,857 + -1.3 366,857 + +0.5 366,857 + +0.1 366,858 - +0.3 366,858 - -2.1 366,858 - +0.7 366,858 - +0.8 366,858 - -0.5 366,858 - -1.0 366,858 - +0.7 366,866 + -0.4 366,867 - +0.3 366,922 + btsT MCAODC_01900 0.10 +0.5 366,941 + btsT MCAODC_01900 0.11 +1.1 366,941 + btsT MCAODC_01900 0.11 +0.9 366,941 + btsT MCAODC_01900 0.11 -0.6 366,942 - btsT MCAODC_01900 0.11 +0.4 366,942 - btsT MCAODC_01900 0.11 -0.9 366,942 - btsT MCAODC_01900 0.11 +0.1 366,942 - btsT MCAODC_01900 0.11 +0.2 366,959 + btsT MCAODC_01900 0.12 -0.3 367,075 - btsT MCAODC_01900 0.18 -1.4 367,102 + btsT MCAODC_01900 0.19 -0.1 367,114 + btsT MCAODC_01900 0.19 +1.9 367,114 + btsT MCAODC_01900 0.19 -1.0 367,115 - btsT MCAODC_01900 0.19 +0.1 367,210 - btsT MCAODC_01900 0.24 +0.2 367,303 - btsT MCAODC_01900 0.28 +1.6 367,318 + btsT MCAODC_01900 0.29 -0.1 367,319 - btsT MCAODC_01900 0.29 +0.3 367,319 - btsT MCAODC_01900 0.29 -0.2 367,328 + btsT MCAODC_01900 0.29 -0.3 367,328 + btsT MCAODC_01900 0.29 -0.3 367,328 + btsT MCAODC_01900 0.29 -0.5 367,328 + btsT MCAODC_01900 0.29 -1.0 367,328 + btsT MCAODC_01900 0.29 +0.7 367,328 + btsT MCAODC_01900 0.29 +0.7 367,328 + btsT MCAODC_01900 0.29 +0.3 367,328 + btsT MCAODC_01900 0.29 +0.6 367,328 + btsT MCAODC_01900 0.29 -1.1 367,329 - btsT MCAODC_01900 0.29 +1.2 367,329 - btsT MCAODC_01900 0.29 +1.3 367,329 - btsT MCAODC_01900 0.29 -1.2 367,329 - btsT MCAODC_01900 0.29 -0.6 367,329 - btsT MCAODC_01900 0.29 -0.5 367,329 - btsT MCAODC_01900 0.29 +0.7 367,329 - btsT MCAODC_01900 0.29 +1.3 367,329 - btsT MCAODC_01900 0.29 +0.7 367,329 - btsT MCAODC_01900 0.29 +0.9 367,329 - btsT MCAODC_01900 0.29 +0.0 367,329 - btsT MCAODC_01900 0.29 -0.1 367,329 - btsT MCAODC_01900 0.29 -0.4 367,329 - btsT MCAODC_01900 0.29 -0.6 367,329 - btsT MCAODC_01900 0.29 +1.5 367,340 - btsT MCAODC_01900 0.30 +0.0 367,373 - btsT MCAODC_01900 0.31 -1.2 367,373 - btsT MCAODC_01900 0.31 -2.6 367,373 - btsT MCAODC_01900 0.31 +0.2 367,399 + btsT MCAODC_01900 0.33 +0.1 367,404 - btsT MCAODC_01900 0.33 -0.8 367,472 - btsT MCAODC_01900 0.36 -0.3 367,472 - btsT MCAODC_01900 0.36 +0.1 367,545 - btsT MCAODC_01900 0.39 +0.8 367,640 + btsT MCAODC_01900 0.44 -0.1 367,640 + btsT MCAODC_01900 0.44 -0.9 367,641 - btsT MCAODC_01900 0.44 -0.8 367,871 + btsT MCAODC_01900 0.55 +0.3 367,872 - btsT MCAODC_01900 0.55 +0.3 367,918 + btsT MCAODC_01900 0.57 +0.8 368,110 - btsT MCAODC_01900 0.66 +1.3 368,407 + btsT MCAODC_01900 0.79 -0.9 368,465 - btsT MCAODC_01900 0.82 +1.1 368,465 - btsT MCAODC_01900 0.82 +0.7 368,483 + btsT MCAODC_01900 0.83 -0.1 368,484 - btsT MCAODC_01900 0.83 +0.2 368,494 - btsT MCAODC_01900 0.83 +0.1 368,521 + btsT MCAODC_01900 0.85 +0.5 368,521 + btsT MCAODC_01900 0.85 -1.4 368,521 + btsT MCAODC_01900 0.85 +0.0 368,522 - btsT MCAODC_01900 0.85 -2.0 368,588 + btsT MCAODC_01900 0.88 -0.0 368,589 - btsT MCAODC_01900 0.88 +2.0 368,603 + btsT MCAODC_01900 0.89 +1.7 368,627 - btsT MCAODC_01900 0.90 -0.3 368,627 - btsT MCAODC_01900 0.90 +0.6 368,636 - -0.7 368,636 - -0.1 368,681 + -0.6 368,681 + +0.7 368,681 + +0.8 368,681 + +1.2 368,681 + -1.3 368,682 - -1.6 368,682 - -0.4 368,682 - -0.1 368,682 - -1.8 368,682 - +0.5 368,682 - -0.2 368,701 + -0.3 368,723 + +0.5 368,723 + +0.7 368,723 + -0.5 368,724 - +0.7 368,767 + +0.4 368,768 - -0.8 368,768 - +0.6 368,768 - +1.2 368,768 - +0.4 368,782 + +0.2 368,801 + +0.2 368,801 + +0.5 368,801 + +0.1 368,801 + -2.0 368,802 - +0.8 368,802 - +0.8 368,802 - +0.3 368,802 - +0.4 368,857 - +0.6 368,897 + +0.6 368,897 + -0.5 368,897 + +0.3 368,897 + -0.7 368,897 + -0.1 368,898 - +1.3 368,898 - -0.5 368,898 - -1.7 368,898 - -0.9 368,906 + +0.4 368,911 + -0.1 368,911 + -2.2 368,911 + +1.1 368,911 + -1.9 368,912 - +0.5 368,912 - -0.3 368,971 - yjiX MCAODC_01905 0.36 -0.5 368,979 + yjiX MCAODC_01905 0.40 +0.4 368,979 + yjiX MCAODC_01905 0.40 +0.3 368,979 + yjiX MCAODC_01905 0.40 +0.4 368,979 + yjiX MCAODC_01905 0.40 -1.0 368,979 + yjiX MCAODC_01905 0.40 +0.2 368,979 + yjiX MCAODC_01905 0.40 -0.2 368,979 + yjiX MCAODC_01905 0.40 +0.2 368,980 - yjiX MCAODC_01905 0.40 +0.1 368,980 - yjiX MCAODC_01905 0.40 -0.2 368,980 - yjiX MCAODC_01905 0.40 +1.1 368,980 - yjiX MCAODC_01905 0.40 +0.3 368,980 - yjiX MCAODC_01905 0.40 -0.0 368,980 - yjiX MCAODC_01905 0.40 -1.2 368,990 + yjiX MCAODC_01905 0.45 +0.1 368,990 + yjiX MCAODC_01905 0.45 +0.2 368,990 + yjiX MCAODC_01905 0.45 +0.2 369,018 + yjiX MCAODC_01905 0.59 +0.5 369,018 + yjiX MCAODC_01905 0.59 -0.1 369,018 + yjiX MCAODC_01905 0.59 +0.0 369,018 + yjiX MCAODC_01905 0.59 +0.7 369,018 + yjiX MCAODC_01905 0.59 -1.1 369,019 - yjiX MCAODC_01905 0.59 +0.2 369,028 - yjiX MCAODC_01905 0.64 +0.3 369,028 - yjiX MCAODC_01905 0.64 +0.8 369,077 + yjiX MCAODC_01905 0.88 -0.4 369,078 - yjiX MCAODC_01905 0.88 -1.3 369,130 - -0.3 369,150 - +0.9 369,181 - +0.2 369,181 - -0.5 369,203 - -0.0 369,342 - yjiA MCAODC_01910 0.24 +0.6 369,342 - yjiA MCAODC_01910 0.24 -0.8 369,366 + yjiA MCAODC_01910 0.27 +1.0 369,376 - yjiA MCAODC_01910 0.28 -0.2 369,376 - yjiA MCAODC_01910 0.28 +0.2 369,462 - yjiA MCAODC_01910 0.37 +2.0 369,473 - yjiA MCAODC_01910 0.38 +0.3 369,509 + yjiA MCAODC_01910 0.41 +0.2 369,509 + yjiA MCAODC_01910 0.41 -2.4 369,510 - yjiA MCAODC_01910 0.42 -0.1 369,573 + yjiA MCAODC_01910 0.48 -1.5 369,715 - yjiA MCAODC_01910 0.63 +1.0 369,781 - yjiA MCAODC_01910 0.70 -0.0 369,797 + yjiA MCAODC_01910 0.72 +1.2 369,815 + yjiA MCAODC_01910 0.73 -0.0 369,816 - yjiA MCAODC_01910 0.74 -0.0 369,820 - yjiA MCAODC_01910 0.74 +0.2
Or see this region's nucleotide sequence