Experiment: UV exposure at 150J/m2 for 10 seconds
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_03020 and MPMX26_03021 overlap by 4 nucleotides MPMX26_03021 and MPMX26_03022 are separated by 23 nucleotides MPMX26_03022 and MPMX26_03023 are separated by 89 nucleotides
MPMX26_03020: MPMX26_03020 - Methionyl-tRNA formyltransferase, at 3,139,029 to 3,139,991
_03020
MPMX26_03021: MPMX26_03021 - Ribosomal RNA small subunit methyltransferase B, at 3,139,988 to 3,141,295
_03021
MPMX26_03022: MPMX26_03022 - Zinc transporter ZupT, at 3,141,319 to 3,142,128
_03022
MPMX26_03023: MPMX26_03023 - hypothetical protein, at 3,142,218 to 3,142,346
_03023
Position (kb)
3139
3140
3141
3142 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3139.931 kb on + strand at 3139.992 kb on + strand at 3139.992 kb on + strand at 3140.010 kb on + strand at 3140.010 kb on + strand at 3140.020 kb on + strand at 3140.031 kb on + strand at 3140.036 kb on + strand at 3140.036 kb on + strand at 3140.038 kb on + strand at 3140.055 kb on + strand at 3140.055 kb on + strand at 3140.057 kb on + strand at 3140.057 kb on + strand at 3140.057 kb on + strand at 3140.057 kb on + strand at 3140.057 kb on + strand at 3140.057 kb on + strand at 3140.057 kb on + strand at 3140.063 kb on - strand at 3140.065 kb on + strand at 3140.065 kb on + strand at 3140.066 kb on + strand at 3140.073 kb on + strand at 3140.085 kb on + strand at 3140.126 kb on + strand, within MPMX26_03021 at 3140.140 kb on + strand, within MPMX26_03021 at 3140.140 kb on + strand, within MPMX26_03021 at 3140.171 kb on + strand, within MPMX26_03021 at 3140.172 kb on + strand, within MPMX26_03021 at 3140.207 kb on + strand, within MPMX26_03021 at 3140.212 kb on + strand, within MPMX26_03021 at 3140.212 kb on + strand, within MPMX26_03021 at 3140.212 kb on + strand, within MPMX26_03021 at 3140.225 kb on + strand, within MPMX26_03021 at 3140.225 kb on + strand, within MPMX26_03021 at 3140.239 kb on + strand, within MPMX26_03021 at 3140.246 kb on + strand, within MPMX26_03021 at 3140.253 kb on + strand, within MPMX26_03021 at 3140.305 kb on + strand, within MPMX26_03021 at 3140.320 kb on + strand, within MPMX26_03021 at 3140.325 kb on + strand, within MPMX26_03021 at 3140.400 kb on + strand, within MPMX26_03021 at 3140.400 kb on + strand, within MPMX26_03021 at 3140.400 kb on + strand, within MPMX26_03021 at 3140.400 kb on + strand, within MPMX26_03021 at 3140.400 kb on + strand, within MPMX26_03021 at 3140.400 kb on + strand, within MPMX26_03021 at 3140.434 kb on + strand, within MPMX26_03021 at 3140.446 kb on + strand, within MPMX26_03021 at 3140.446 kb on + strand, within MPMX26_03021 at 3140.446 kb on + strand, within MPMX26_03021 at 3140.446 kb on + strand, within MPMX26_03021 at 3140.452 kb on + strand, within MPMX26_03021 at 3140.452 kb on + strand, within MPMX26_03021 at 3140.457 kb on + strand, within MPMX26_03021 at 3140.457 kb on + strand, within MPMX26_03021 at 3140.467 kb on + strand, within MPMX26_03021 at 3140.487 kb on + strand, within MPMX26_03021 at 3140.488 kb on + strand, within MPMX26_03021 at 3140.501 kb on + strand, within MPMX26_03021 at 3140.504 kb on + strand, within MPMX26_03021 at 3140.527 kb on + strand, within MPMX26_03021 at 3140.550 kb on + strand, within MPMX26_03021 at 3140.597 kb on + strand, within MPMX26_03021 at 3140.597 kb on + strand, within MPMX26_03021 at 3140.597 kb on + strand, within MPMX26_03021 at 3140.597 kb on + strand, within MPMX26_03021 at 3140.610 kb on + strand, within MPMX26_03021 at 3140.620 kb on + strand, within MPMX26_03021 at 3140.626 kb on + strand, within MPMX26_03021 at 3140.626 kb on + strand, within MPMX26_03021 at 3140.626 kb on + strand, within MPMX26_03021 at 3140.626 kb on + strand, within MPMX26_03021 at 3140.626 kb on + strand, within MPMX26_03021 at 3140.626 kb on + strand, within MPMX26_03021 at 3140.626 kb on + strand, within MPMX26_03021 at 3140.626 kb on + strand, within MPMX26_03021 at 3140.626 kb on + strand, within MPMX26_03021 at 3140.626 kb on + strand, within MPMX26_03021 at 3140.626 kb on + strand, within MPMX26_03021 at 3140.626 kb on + strand, within MPMX26_03021 at 3140.626 kb on + strand, within MPMX26_03021 at 3140.626 kb on + strand, within MPMX26_03021 at 3140.626 kb on + strand, within MPMX26_03021 at 3140.626 kb on + strand, within MPMX26_03021 at 3140.626 kb on + strand, within MPMX26_03021 at 3140.626 kb on + strand, within MPMX26_03021 at 3140.652 kb on + strand, within MPMX26_03021 at 3140.652 kb on + strand, within MPMX26_03021 at 3140.680 kb on + strand, within MPMX26_03021 at 3140.680 kb on + strand, within MPMX26_03021 at 3140.680 kb on + strand, within MPMX26_03021 at 3140.695 kb on + strand, within MPMX26_03021 at 3140.695 kb on + strand, within MPMX26_03021 at 3140.695 kb on + strand, within MPMX26_03021 at 3140.700 kb on + strand, within MPMX26_03021 at 3140.737 kb on + strand, within MPMX26_03021 at 3140.738 kb on + strand, within MPMX26_03021 at 3140.745 kb on + strand, within MPMX26_03021 at 3140.748 kb on + strand, within MPMX26_03021 at 3140.748 kb on + strand, within MPMX26_03021 at 3140.748 kb on + strand, within MPMX26_03021 at 3140.788 kb on + strand, within MPMX26_03021 at 3140.788 kb on + strand, within MPMX26_03021 at 3140.788 kb on + strand, within MPMX26_03021 at 3140.798 kb on + strand, within MPMX26_03021 at 3140.798 kb on + strand, within MPMX26_03021 at 3140.816 kb on + strand, within MPMX26_03021 at 3140.816 kb on + strand, within MPMX26_03021 at 3140.816 kb on + strand, within MPMX26_03021 at 3140.816 kb on + strand, within MPMX26_03021 at 3140.862 kb on + strand, within MPMX26_03021 at 3140.862 kb on + strand, within MPMX26_03021 at 3140.862 kb on + strand, within MPMX26_03021 at 3140.869 kb on + strand, within MPMX26_03021 at 3140.890 kb on + strand, within MPMX26_03021 at 3140.890 kb on + strand, within MPMX26_03021 at 3140.890 kb on + strand, within MPMX26_03021 at 3140.890 kb on + strand, within MPMX26_03021 at 3140.904 kb on + strand, within MPMX26_03021 at 3140.929 kb on + strand, within MPMX26_03021 at 3141.013 kb on + strand, within MPMX26_03021 at 3141.014 kb on + strand, within MPMX26_03021 at 3141.033 kb on + strand, within MPMX26_03021 at 3141.033 kb on + strand, within MPMX26_03021 at 3141.075 kb on + strand, within MPMX26_03021 at 3141.076 kb on + strand, within MPMX26_03021 at 3141.076 kb on + strand, within MPMX26_03021 at 3141.076 kb on + strand, within MPMX26_03021 at 3141.076 kb on + strand, within MPMX26_03021 at 3141.101 kb on + strand, within MPMX26_03021 at 3141.146 kb on + strand, within MPMX26_03021 at 3141.151 kb on + strand, within MPMX26_03021 at 3141.151 kb on + strand, within MPMX26_03021 at 3141.176 kb on + strand at 3141.187 kb on + strand at 3141.197 kb on + strand at 3141.197 kb on + strand at 3141.204 kb on + strand at 3141.209 kb on + strand at 3141.209 kb on + strand at 3141.209 kb on + strand at 3141.209 kb on + strand at 3141.214 kb on + strand at 3141.219 kb on + strand at 3141.324 kb on - strand at 3141.754 kb on + strand, within MPMX26_03022 at 3141.999 kb on - strand, within MPMX26_03022 at 3142.047 kb on - strand, within MPMX26_03022 at 3142.049 kb on + strand at 3142.057 kb on - strand at 3142.203 kb on - strand at 3142.203 kb on - strand at 3142.233 kb on - strand, within MPMX26_03023
Per-strain Table
Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 10 seconds remove 3,139,931 + +0.3 3,139,992 + +0.3 3,139,992 + -1.3 3,140,010 + -0.7 3,140,010 + +0.8 3,140,020 + -0.6 3,140,031 + +1.3 3,140,036 + +1.1 3,140,036 + -0.2 3,140,038 + -1.0 3,140,055 + +0.1 3,140,055 + +1.8 3,140,057 + +0.6 3,140,057 + +0.2 3,140,057 + +0.3 3,140,057 + -0.4 3,140,057 + -0.1 3,140,057 + -0.2 3,140,057 + -0.2 3,140,063 - +0.8 3,140,065 + +0.5 3,140,065 + -0.8 3,140,066 + +0.4 3,140,073 + +0.2 3,140,085 + +0.5 3,140,126 + MPMX26_03021 0.11 -1.0 3,140,140 + MPMX26_03021 0.12 +0.1 3,140,140 + MPMX26_03021 0.12 -0.7 3,140,171 + MPMX26_03021 0.14 -0.5 3,140,172 + MPMX26_03021 0.14 -0.9 3,140,207 + MPMX26_03021 0.17 -0.1 3,140,212 + MPMX26_03021 0.17 -0.7 3,140,212 + MPMX26_03021 0.17 -0.2 3,140,212 + MPMX26_03021 0.17 +0.3 3,140,225 + MPMX26_03021 0.18 -0.5 3,140,225 + MPMX26_03021 0.18 +0.1 3,140,239 + MPMX26_03021 0.19 -0.9 3,140,246 + MPMX26_03021 0.20 +1.4 3,140,253 + MPMX26_03021 0.20 -0.6 3,140,305 + MPMX26_03021 0.24 +0.2 3,140,320 + MPMX26_03021 0.25 -0.4 3,140,325 + MPMX26_03021 0.26 +1.3 3,140,400 + MPMX26_03021 0.31 +1.5 3,140,400 + MPMX26_03021 0.31 -0.6 3,140,400 + MPMX26_03021 0.31 +1.0 3,140,400 + MPMX26_03021 0.31 -0.6 3,140,400 + MPMX26_03021 0.31 -0.7 3,140,400 + MPMX26_03021 0.31 +0.8 3,140,434 + MPMX26_03021 0.34 -0.2 3,140,446 + MPMX26_03021 0.35 -0.3 3,140,446 + MPMX26_03021 0.35 +0.8 3,140,446 + MPMX26_03021 0.35 -0.8 3,140,446 + MPMX26_03021 0.35 +0.1 3,140,452 + MPMX26_03021 0.35 +0.2 3,140,452 + MPMX26_03021 0.35 +0.0 3,140,457 + MPMX26_03021 0.36 +0.8 3,140,457 + MPMX26_03021 0.36 +0.7 3,140,467 + MPMX26_03021 0.37 -0.0 3,140,487 + MPMX26_03021 0.38 +0.0 3,140,488 + MPMX26_03021 0.38 +0.1 3,140,501 + MPMX26_03021 0.39 -0.7 3,140,504 + MPMX26_03021 0.39 -0.0 3,140,527 + MPMX26_03021 0.41 -0.6 3,140,550 + MPMX26_03021 0.43 +1.4 3,140,597 + MPMX26_03021 0.47 +0.3 3,140,597 + MPMX26_03021 0.47 +0.1 3,140,597 + MPMX26_03021 0.47 -0.2 3,140,597 + MPMX26_03021 0.47 -0.2 3,140,610 + MPMX26_03021 0.48 -0.7 3,140,620 + MPMX26_03021 0.48 -1.0 3,140,626 + MPMX26_03021 0.49 -1.0 3,140,626 + MPMX26_03021 0.49 +0.6 3,140,626 + MPMX26_03021 0.49 +0.3 3,140,626 + MPMX26_03021 0.49 -0.3 3,140,626 + MPMX26_03021 0.49 +0.5 3,140,626 + MPMX26_03021 0.49 +0.8 3,140,626 + MPMX26_03021 0.49 -0.3 3,140,626 + MPMX26_03021 0.49 +0.2 3,140,626 + MPMX26_03021 0.49 -0.2 3,140,626 + MPMX26_03021 0.49 -0.1 3,140,626 + MPMX26_03021 0.49 -0.2 3,140,626 + MPMX26_03021 0.49 +0.3 3,140,626 + MPMX26_03021 0.49 +0.3 3,140,626 + MPMX26_03021 0.49 -0.2 3,140,626 + MPMX26_03021 0.49 -1.0 3,140,626 + MPMX26_03021 0.49 -0.2 3,140,626 + MPMX26_03021 0.49 +0.1 3,140,626 + MPMX26_03021 0.49 -0.4 3,140,652 + MPMX26_03021 0.51 +1.0 3,140,652 + MPMX26_03021 0.51 -0.1 3,140,680 + MPMX26_03021 0.53 +0.1 3,140,680 + MPMX26_03021 0.53 -0.2 3,140,680 + MPMX26_03021 0.53 -0.3 3,140,695 + MPMX26_03021 0.54 +0.2 3,140,695 + MPMX26_03021 0.54 -0.8 3,140,695 + MPMX26_03021 0.54 +0.7 3,140,700 + MPMX26_03021 0.54 +0.4 3,140,737 + MPMX26_03021 0.57 -0.5 3,140,738 + MPMX26_03021 0.57 +0.4 3,140,745 + MPMX26_03021 0.58 +1.3 3,140,748 + MPMX26_03021 0.58 -2.0 3,140,748 + MPMX26_03021 0.58 +0.5 3,140,748 + MPMX26_03021 0.58 -0.7 3,140,788 + MPMX26_03021 0.61 +2.3 3,140,788 + MPMX26_03021 0.61 -0.1 3,140,788 + MPMX26_03021 0.61 -0.5 3,140,798 + MPMX26_03021 0.62 +0.2 3,140,798 + MPMX26_03021 0.62 +0.8 3,140,816 + MPMX26_03021 0.63 -0.2 3,140,816 + MPMX26_03021 0.63 +0.3 3,140,816 + MPMX26_03021 0.63 -0.5 3,140,816 + MPMX26_03021 0.63 -0.5 3,140,862 + MPMX26_03021 0.67 -0.9 3,140,862 + MPMX26_03021 0.67 +0.4 3,140,862 + MPMX26_03021 0.67 -0.8 3,140,869 + MPMX26_03021 0.67 -0.9 3,140,890 + MPMX26_03021 0.69 -0.7 3,140,890 + MPMX26_03021 0.69 +0.8 3,140,890 + MPMX26_03021 0.69 +1.8 3,140,890 + MPMX26_03021 0.69 +0.6 3,140,904 + MPMX26_03021 0.70 -0.2 3,140,929 + MPMX26_03021 0.72 +0.2 3,141,013 + MPMX26_03021 0.78 +0.6 3,141,014 + MPMX26_03021 0.78 -0.3 3,141,033 + MPMX26_03021 0.80 -0.6 3,141,033 + MPMX26_03021 0.80 -1.5 3,141,075 + MPMX26_03021 0.83 +1.4 3,141,076 + MPMX26_03021 0.83 -0.1 3,141,076 + MPMX26_03021 0.83 -0.3 3,141,076 + MPMX26_03021 0.83 +0.6 3,141,076 + MPMX26_03021 0.83 +0.3 3,141,101 + MPMX26_03021 0.85 -1.4 3,141,146 + MPMX26_03021 0.89 -0.0 3,141,151 + MPMX26_03021 0.89 +0.1 3,141,151 + MPMX26_03021 0.89 +0.1 3,141,176 + +0.1 3,141,187 + -0.9 3,141,197 + -0.0 3,141,197 + +0.3 3,141,204 + +0.8 3,141,209 + -1.6 3,141,209 + -0.3 3,141,209 + -0.5 3,141,209 + -0.6 3,141,214 + -1.0 3,141,219 + -1.4 3,141,324 - +1.1 3,141,754 + MPMX26_03022 0.54 -0.7 3,141,999 - MPMX26_03022 0.84 +0.3 3,142,047 - MPMX26_03022 0.90 -1.0 3,142,049 + -0.3 3,142,057 - +1.4 3,142,203 - -0.3 3,142,203 - +0.2 3,142,233 - MPMX26_03023 0.12 +0.1
Or see this region's nucleotide sequence