Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02508

Experiment: UV exposure at 150J/m2 for 10 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02507 and MPMX26_02508 are separated by 60 nucleotidesMPMX26_02508 and MPMX26_02509 are separated by 15 nucleotides MPMX26_02507: MPMX26_02507 - Succinyl-diaminopimelate desuccinylase, at 2,587,717 to 2,588,853 _02507 MPMX26_02508: MPMX26_02508 - hypothetical protein, at 2,588,914 to 2,589,378 _02508 MPMX26_02509: MPMX26_02509 - Sensor histidine kinase RcsC, at 2,589,394 to 2,593,776 _02509 Position (kb) 2588 2589 2590Strain fitness (log2 ratio) -1 0 1at 2588.857 kb on + strandat 2588.989 kb on - strand, within MPMX26_02508at 2589.020 kb on - strand, within MPMX26_02508at 2589.027 kb on - strand, within MPMX26_02508at 2589.027 kb on - strand, within MPMX26_02508at 2589.030 kb on - strand, within MPMX26_02508at 2589.047 kb on - strand, within MPMX26_02508at 2589.047 kb on - strand, within MPMX26_02508at 2589.047 kb on - strand, within MPMX26_02508at 2589.047 kb on - strand, within MPMX26_02508at 2589.062 kb on - strand, within MPMX26_02508at 2589.062 kb on - strand, within MPMX26_02508at 2589.090 kb on - strand, within MPMX26_02508at 2589.090 kb on - strand, within MPMX26_02508at 2589.090 kb on - strand, within MPMX26_02508at 2589.090 kb on - strand, within MPMX26_02508at 2589.090 kb on - strand, within MPMX26_02508at 2589.102 kb on - strand, within MPMX26_02508at 2589.102 kb on - strand, within MPMX26_02508at 2589.107 kb on - strand, within MPMX26_02508at 2589.145 kb on - strand, within MPMX26_02508at 2589.145 kb on - strand, within MPMX26_02508at 2589.152 kb on - strand, within MPMX26_02508at 2589.160 kb on - strand, within MPMX26_02508at 2589.160 kb on - strand, within MPMX26_02508at 2589.217 kb on - strand, within MPMX26_02508at 2589.239 kb on - strand, within MPMX26_02508at 2589.246 kb on - strand, within MPMX26_02508at 2589.272 kb on - strand, within MPMX26_02508at 2589.279 kb on - strand, within MPMX26_02508at 2589.319 kb on - strand, within MPMX26_02508at 2589.330 kb on - strand, within MPMX26_02508at 2589.375 kb on - strandat 2589.375 kb on - strandat 2589.436 kb on - strandat 2589.438 kb on - strandat 2589.441 kb on - strandat 2589.443 kb on - strandat 2589.443 kb on - strandat 2589.460 kb on - strandat 2589.476 kb on - strandat 2589.476 kb on - strandat 2589.481 kb on - strandat 2589.510 kb on - strandat 2589.552 kb on - strandat 2589.573 kb on - strandat 2589.646 kb on - strandat 2589.665 kb on - strandat 2589.665 kb on - strandat 2589.677 kb on - strandat 2589.677 kb on - strandat 2589.692 kb on - strandat 2589.692 kb on - strandat 2589.693 kb on - strandat 2589.693 kb on - strandat 2589.693 kb on - strandat 2589.720 kb on - strandat 2589.720 kb on - strandat 2589.735 kb on - strandat 2589.737 kb on - strandat 2589.739 kb on - strandat 2589.747 kb on - strandat 2589.757 kb on - strandat 2589.847 kb on - strand, within MPMX26_02509at 2589.847 kb on - strand, within MPMX26_02509at 2589.847 kb on - strand, within MPMX26_02509at 2589.847 kb on - strand, within MPMX26_02509at 2589.860 kb on - strand, within MPMX26_02509at 2589.871 kb on - strand, within MPMX26_02509at 2589.871 kb on - strand, within MPMX26_02509at 2589.888 kb on - strand, within MPMX26_02509at 2589.908 kb on - strand, within MPMX26_02509at 2589.910 kb on - strand, within MPMX26_02509at 2589.919 kb on - strand, within MPMX26_02509at 2589.924 kb on - strand, within MPMX26_02509at 2589.929 kb on - strand, within MPMX26_02509at 2589.930 kb on - strand, within MPMX26_02509at 2589.966 kb on - strand, within MPMX26_02509at 2590.039 kb on - strand, within MPMX26_02509at 2590.039 kb on - strand, within MPMX26_02509at 2590.039 kb on - strand, within MPMX26_02509at 2590.039 kb on - strand, within MPMX26_02509at 2590.039 kb on - strand, within MPMX26_02509at 2590.039 kb on - strand, within MPMX26_02509at 2590.041 kb on - strand, within MPMX26_02509at 2590.131 kb on - strand, within MPMX26_02509at 2590.163 kb on + strand, within MPMX26_02509at 2590.171 kb on - strand, within MPMX26_02509at 2590.213 kb on - strand, within MPMX26_02509at 2590.213 kb on - strand, within MPMX26_02509at 2590.231 kb on - strand, within MPMX26_02509at 2590.244 kb on - strand, within MPMX26_02509at 2590.244 kb on - strand, within MPMX26_02509at 2590.244 kb on - strand, within MPMX26_02509at 2590.286 kb on - strand, within MPMX26_02509at 2590.288 kb on - strand, within MPMX26_02509at 2590.288 kb on - strand, within MPMX26_02509at 2590.288 kb on - strand, within MPMX26_02509at 2590.299 kb on - strand, within MPMX26_02509at 2590.299 kb on - strand, within MPMX26_02509at 2590.299 kb on - strand, within MPMX26_02509at 2590.299 kb on - strand, within MPMX26_02509at 2590.324 kb on - strand, within MPMX26_02509at 2590.342 kb on - strand, within MPMX26_02509at 2590.342 kb on - strand, within MPMX26_02509at 2590.342 kb on - strand, within MPMX26_02509at 2590.347 kb on - strand, within MPMX26_02509at 2590.347 kb on - strand, within MPMX26_02509at 2590.347 kb on - strand, within MPMX26_02509at 2590.347 kb on - strand, within MPMX26_02509at 2590.347 kb on - strand, within MPMX26_02509at 2590.347 kb on - strand, within MPMX26_02509at 2590.347 kb on - strand, within MPMX26_02509at 2590.347 kb on - strand, within MPMX26_02509at 2590.350 kb on - strand, within MPMX26_02509at 2590.359 kb on - strand, within MPMX26_02509at 2590.359 kb on - strand, within MPMX26_02509at 2590.359 kb on - strand, within MPMX26_02509at 2590.359 kb on - strand, within MPMX26_02509

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 10 seconds
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2,588,857 + -0.5
2,588,989 - MPMX26_02508 0.16 +0.0
2,589,020 - MPMX26_02508 0.23 -0.2
2,589,027 - MPMX26_02508 0.24 +0.8
2,589,027 - MPMX26_02508 0.24 +0.2
2,589,030 - MPMX26_02508 0.25 -0.1
2,589,047 - MPMX26_02508 0.29 +0.1
2,589,047 - MPMX26_02508 0.29 +0.1
2,589,047 - MPMX26_02508 0.29 +0.1
2,589,047 - MPMX26_02508 0.29 +0.8
2,589,062 - MPMX26_02508 0.32 +0.4
2,589,062 - MPMX26_02508 0.32 +0.3
2,589,090 - MPMX26_02508 0.38 -0.6
2,589,090 - MPMX26_02508 0.38 -0.0
2,589,090 - MPMX26_02508 0.38 -0.4
2,589,090 - MPMX26_02508 0.38 +0.3
2,589,090 - MPMX26_02508 0.38 +0.2
2,589,102 - MPMX26_02508 0.40 -0.5
2,589,102 - MPMX26_02508 0.40 +0.5
2,589,107 - MPMX26_02508 0.42 +0.0
2,589,145 - MPMX26_02508 0.50 -0.1
2,589,145 - MPMX26_02508 0.50 +0.1
2,589,152 - MPMX26_02508 0.51 -0.1
2,589,160 - MPMX26_02508 0.53 -0.5
2,589,160 - MPMX26_02508 0.53 +0.3
2,589,217 - MPMX26_02508 0.65 +0.3
2,589,239 - MPMX26_02508 0.70 -0.0
2,589,246 - MPMX26_02508 0.71 -0.2
2,589,272 - MPMX26_02508 0.77 +0.4
2,589,279 - MPMX26_02508 0.78 +0.1
2,589,319 - MPMX26_02508 0.87 -0.0
2,589,330 - MPMX26_02508 0.89 +0.2
2,589,375 - -0.2
2,589,375 - -0.6
2,589,436 - -0.5
2,589,438 - +0.2
2,589,441 - -0.3
2,589,443 - +0.2
2,589,443 - -0.1
2,589,460 - -0.1
2,589,476 - +0.5
2,589,476 - -0.4
2,589,481 - -0.6
2,589,510 - -1.1
2,589,552 - -0.1
2,589,573 - -0.6
2,589,646 - -0.6
2,589,665 - +1.1
2,589,665 - +0.1
2,589,677 - +1.6
2,589,677 - -0.9
2,589,692 - +0.6
2,589,692 - -0.5
2,589,693 - +0.4
2,589,693 - +0.0
2,589,693 - -0.3
2,589,720 - +0.6
2,589,720 - +0.3
2,589,735 - -0.2
2,589,737 - +0.5
2,589,739 - +0.1
2,589,747 - -0.0
2,589,757 - +0.2
2,589,847 - MPMX26_02509 0.10 -0.5
2,589,847 - MPMX26_02509 0.10 +1.3
2,589,847 - MPMX26_02509 0.10 +0.8
2,589,847 - MPMX26_02509 0.10 +1.4
2,589,860 - MPMX26_02509 0.11 -0.2
2,589,871 - MPMX26_02509 0.11 +1.5
2,589,871 - MPMX26_02509 0.11 +1.0
2,589,888 - MPMX26_02509 0.11 -0.3
2,589,908 - MPMX26_02509 0.12 +1.1
2,589,910 - MPMX26_02509 0.12 +0.4
2,589,919 - MPMX26_02509 0.12 +0.4
2,589,924 - MPMX26_02509 0.12 -0.4
2,589,929 - MPMX26_02509 0.12 +1.1
2,589,930 - MPMX26_02509 0.12 +0.5
2,589,966 - MPMX26_02509 0.13 +0.1
2,590,039 - MPMX26_02509 0.15 +0.1
2,590,039 - MPMX26_02509 0.15 +0.8
2,590,039 - MPMX26_02509 0.15 +1.1
2,590,039 - MPMX26_02509 0.15 +0.5
2,590,039 - MPMX26_02509 0.15 +0.5
2,590,039 - MPMX26_02509 0.15 +0.2
2,590,041 - MPMX26_02509 0.15 +0.0
2,590,131 - MPMX26_02509 0.17 +0.4
2,590,163 + MPMX26_02509 0.18 -0.2
2,590,171 - MPMX26_02509 0.18 +1.7
2,590,213 - MPMX26_02509 0.19 +0.4
2,590,213 - MPMX26_02509 0.19 +0.7
2,590,231 - MPMX26_02509 0.19 +0.5
2,590,244 - MPMX26_02509 0.19 +0.3
2,590,244 - MPMX26_02509 0.19 +0.5
2,590,244 - MPMX26_02509 0.19 +0.2
2,590,286 - MPMX26_02509 0.20 +0.5
2,590,288 - MPMX26_02509 0.20 -0.0
2,590,288 - MPMX26_02509 0.20 +0.8
2,590,288 - MPMX26_02509 0.20 +0.5
2,590,299 - MPMX26_02509 0.21 +0.9
2,590,299 - MPMX26_02509 0.21 +1.0
2,590,299 - MPMX26_02509 0.21 +1.0
2,590,299 - MPMX26_02509 0.21 -0.0
2,590,324 - MPMX26_02509 0.21 +0.8
2,590,342 - MPMX26_02509 0.22 -0.2
2,590,342 - MPMX26_02509 0.22 +1.2
2,590,342 - MPMX26_02509 0.22 +1.2
2,590,347 - MPMX26_02509 0.22 +1.5
2,590,347 - MPMX26_02509 0.22 +0.9
2,590,347 - MPMX26_02509 0.22 +0.7
2,590,347 - MPMX26_02509 0.22 -0.5
2,590,347 - MPMX26_02509 0.22 +0.3
2,590,347 - MPMX26_02509 0.22 -0.0
2,590,347 - MPMX26_02509 0.22 +0.3
2,590,347 - MPMX26_02509 0.22 +0.5
2,590,350 - MPMX26_02509 0.22 +0.4
2,590,359 - MPMX26_02509 0.22 +0.6
2,590,359 - MPMX26_02509 0.22 -0.7
2,590,359 - MPMX26_02509 0.22 +0.1
2,590,359 - MPMX26_02509 0.22 +0.9

Or see this region's nucleotide sequence