Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01922

Experiment: UV exposure at 150J/m2 for 10 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01921 and MPMX26_01922 are separated by 678 nucleotidesMPMX26_01922 and MPMX26_01923 are separated by 396 nucleotides MPMX26_01921: MPMX26_01921 - hypothetical protein, at 1,963,066 to 1,964,052 _01921 MPMX26_01922: MPMX26_01922 - hypothetical protein, at 1,964,731 to 1,966,065 _01922 MPMX26_01923: MPMX26_01923 - hypothetical protein, at 1,966,462 to 1,966,974 _01923 Position (kb) 1964 1965 1966 1967Strain fitness (log2 ratio) -1 0 1at 1963.787 kb on - strand, within MPMX26_01921at 1963.798 kb on - strand, within MPMX26_01921at 1963.855 kb on - strand, within MPMX26_01921at 1963.867 kb on - strand, within MPMX26_01921at 1963.867 kb on - strand, within MPMX26_01921at 1963.867 kb on - strand, within MPMX26_01921at 1963.867 kb on - strand, within MPMX26_01921at 1963.867 kb on - strand, within MPMX26_01921at 1963.867 kb on - strand, within MPMX26_01921at 1963.867 kb on - strand, within MPMX26_01921at 1963.867 kb on - strand, within MPMX26_01921at 1963.867 kb on - strand, within MPMX26_01921at 1963.867 kb on - strand, within MPMX26_01921at 1963.867 kb on - strand, within MPMX26_01921at 1963.867 kb on - strand, within MPMX26_01921at 1963.867 kb on - strand, within MPMX26_01921at 1963.867 kb on - strand, within MPMX26_01921at 1963.985 kb on - strandat 1964.154 kb on - strandat 1965.376 kb on - strand, within MPMX26_01922

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 10 seconds
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1,963,787 - MPMX26_01921 0.73 +0.1
1,963,798 - MPMX26_01921 0.74 +0.1
1,963,855 - MPMX26_01921 0.80 +0.5
1,963,867 - MPMX26_01921 0.81 -1.0
1,963,867 - MPMX26_01921 0.81 +0.3
1,963,867 - MPMX26_01921 0.81 -0.5
1,963,867 - MPMX26_01921 0.81 +0.3
1,963,867 - MPMX26_01921 0.81 +1.1
1,963,867 - MPMX26_01921 0.81 -0.1
1,963,867 - MPMX26_01921 0.81 +0.8
1,963,867 - MPMX26_01921 0.81 +0.0
1,963,867 - MPMX26_01921 0.81 +0.4
1,963,867 - MPMX26_01921 0.81 +0.6
1,963,867 - MPMX26_01921 0.81 +0.3
1,963,867 - MPMX26_01921 0.81 +1.0
1,963,867 - MPMX26_01921 0.81 -0.2
1,963,867 - MPMX26_01921 0.81 -0.2
1,963,985 - +0.8
1,964,154 - -0.1
1,965,376 - MPMX26_01922 0.48 +0.4

Or see this region's nucleotide sequence