Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01696

Experiment: UV exposure at 150J/m2 for 10 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01694 and MPMX26_01695 overlap by 4 nucleotidesMPMX26_01695 and MPMX26_01696 are separated by 73 nucleotidesMPMX26_01696 and MPMX26_01697 are separated by 17 nucleotidesMPMX26_01697 and MPMX26_01698 are separated by 65 nucleotides MPMX26_01694: MPMX26_01694 - 2-halobenzoate 1,2-dioxygenase large subunit, at 1,748,931 to 1,750,313 _01694 MPMX26_01695: MPMX26_01695 - 2-halobenzoate 1,2-dioxygenase small subunit, at 1,750,310 to 1,750,819 _01695 MPMX26_01696: MPMX26_01696 - Benzoate 1,2-dioxygenase electron transfer component, at 1,750,893 to 1,751,909 _01696 MPMX26_01697: MPMX26_01697 - 3-beta-hydroxycholanate 3-dehydrogenase (NADP(+)), at 1,751,927 to 1,752,709 _01697 MPMX26_01698: MPMX26_01698 - Inner membrane protein YdcO, at 1,752,775 to 1,753,995 _01698 Position (kb) 1750 1751 1752Strain fitness (log2 ratio) -1 0 1at 1751.554 kb on + strand, within MPMX26_01696

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 10 seconds
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1,751,554 + MPMX26_01696 0.65 -1.0

Or see this region's nucleotide sequence