Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01223

Experiment: UV exposure at 150J/m2 for 10 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01222 and MPMX26_01223 are separated by 18 nucleotidesMPMX26_01223 and MPMX26_01224 are separated by 43 nucleotidesMPMX26_01224 and MPMX26_01225 are separated by 39 nucleotides MPMX26_01222: MPMX26_01222 - hypothetical protein, at 1,297,145 to 1,298,128 _01222 MPMX26_01223: MPMX26_01223 - hypothetical protein, at 1,298,147 to 1,298,488 _01223 MPMX26_01224: MPMX26_01224 - putative metal-dependent hydrolase YcfH, at 1,298,532 to 1,299,305 _01224 MPMX26_01225: MPMX26_01225 - hypothetical protein, at 1,299,345 to 1,299,953 _01225 Position (kb) 1298 1299Strain fitness (log2 ratio) -1 0 1 2at 1298.123 kb on + strandat 1298.131 kb on + strandat 1298.153 kb on + strandat 1298.166 kb on + strandat 1298.166 kb on + strandat 1298.166 kb on + strandat 1298.166 kb on + strandat 1298.166 kb on + strandat 1298.179 kb on + strandat 1298.179 kb on + strandat 1298.179 kb on + strandat 1298.179 kb on + strandat 1298.179 kb on + strandat 1298.179 kb on + strandat 1298.179 kb on + strandat 1298.206 kb on + strand, within MPMX26_01223at 1298.206 kb on + strand, within MPMX26_01223at 1298.220 kb on + strand, within MPMX26_01223at 1298.230 kb on + strand, within MPMX26_01223at 1298.230 kb on + strand, within MPMX26_01223at 1298.230 kb on + strand, within MPMX26_01223at 1298.333 kb on + strand, within MPMX26_01223at 1298.432 kb on + strand, within MPMX26_01223at 1298.473 kb on + strandat 1298.473 kb on + strandat 1298.473 kb on + strandat 1298.473 kb on + strandat 1298.473 kb on + strandat 1298.473 kb on + strandat 1298.473 kb on + strandat 1298.473 kb on + strandat 1298.620 kb on + strand, within MPMX26_01224at 1298.627 kb on - strand, within MPMX26_01224at 1298.668 kb on + strand, within MPMX26_01224at 1298.668 kb on + strand, within MPMX26_01224at 1298.693 kb on + strand, within MPMX26_01224at 1298.703 kb on + strand, within MPMX26_01224at 1298.708 kb on + strand, within MPMX26_01224at 1298.708 kb on + strand, within MPMX26_01224at 1298.708 kb on + strand, within MPMX26_01224at 1298.708 kb on + strand, within MPMX26_01224at 1298.716 kb on + strand, within MPMX26_01224at 1298.716 kb on + strand, within MPMX26_01224at 1298.716 kb on + strand, within MPMX26_01224at 1298.721 kb on + strand, within MPMX26_01224at 1298.722 kb on + strand, within MPMX26_01224at 1298.722 kb on + strand, within MPMX26_01224at 1298.722 kb on + strand, within MPMX26_01224at 1298.748 kb on + strand, within MPMX26_01224at 1298.748 kb on + strand, within MPMX26_01224at 1298.748 kb on + strand, within MPMX26_01224at 1298.748 kb on + strand, within MPMX26_01224at 1298.748 kb on + strand, within MPMX26_01224at 1298.748 kb on + strand, within MPMX26_01224at 1298.748 kb on + strand, within MPMX26_01224at 1298.748 kb on + strand, within MPMX26_01224at 1298.748 kb on + strand, within MPMX26_01224at 1298.748 kb on + strand, within MPMX26_01224at 1298.767 kb on + strand, within MPMX26_01224at 1298.823 kb on + strand, within MPMX26_01224at 1298.864 kb on + strand, within MPMX26_01224at 1298.942 kb on + strand, within MPMX26_01224at 1298.942 kb on + strand, within MPMX26_01224at 1298.974 kb on + strand, within MPMX26_01224at 1298.998 kb on + strand, within MPMX26_01224at 1299.019 kb on + strand, within MPMX26_01224at 1299.019 kb on + strand, within MPMX26_01224at 1299.030 kb on + strand, within MPMX26_01224at 1299.030 kb on + strand, within MPMX26_01224at 1299.030 kb on + strand, within MPMX26_01224at 1299.030 kb on + strand, within MPMX26_01224at 1299.030 kb on + strand, within MPMX26_01224at 1299.030 kb on + strand, within MPMX26_01224at 1299.030 kb on + strand, within MPMX26_01224at 1299.030 kb on + strand, within MPMX26_01224at 1299.066 kb on + strand, within MPMX26_01224at 1299.066 kb on + strand, within MPMX26_01224at 1299.105 kb on + strand, within MPMX26_01224at 1299.118 kb on + strand, within MPMX26_01224at 1299.143 kb on + strand, within MPMX26_01224at 1299.148 kb on + strand, within MPMX26_01224at 1299.219 kb on + strand, within MPMX26_01224at 1299.231 kb on + strandat 1299.235 kb on + strandat 1299.338 kb on + strandat 1299.399 kb on + strandat 1299.472 kb on + strand, within MPMX26_01225at 1299.473 kb on + strand, within MPMX26_01225

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 10 seconds
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1,298,123 + +0.4
1,298,131 + -0.2
1,298,153 + +0.7
1,298,166 + +0.8
1,298,166 + +1.0
1,298,166 + +0.6
1,298,166 + +1.1
1,298,166 + +0.5
1,298,179 + +0.5
1,298,179 + +0.3
1,298,179 + +0.5
1,298,179 + +0.4
1,298,179 + +0.8
1,298,179 + +1.9
1,298,179 + +1.0
1,298,206 + MPMX26_01223 0.17 +0.6
1,298,206 + MPMX26_01223 0.17 +0.3
1,298,220 + MPMX26_01223 0.21 +0.8
1,298,230 + MPMX26_01223 0.24 +0.2
1,298,230 + MPMX26_01223 0.24 +1.5
1,298,230 + MPMX26_01223 0.24 +0.8
1,298,333 + MPMX26_01223 0.54 +0.4
1,298,432 + MPMX26_01223 0.83 +0.7
1,298,473 + +0.6
1,298,473 + -0.4
1,298,473 + -0.1
1,298,473 + +0.4
1,298,473 + -1.1
1,298,473 + -0.5
1,298,473 + -0.1
1,298,473 + +0.7
1,298,620 + MPMX26_01224 0.11 +0.0
1,298,627 - MPMX26_01224 0.12 +0.6
1,298,668 + MPMX26_01224 0.18 -0.9
1,298,668 + MPMX26_01224 0.18 -1.0
1,298,693 + MPMX26_01224 0.21 -0.6
1,298,703 + MPMX26_01224 0.22 +0.5
1,298,708 + MPMX26_01224 0.23 +0.9
1,298,708 + MPMX26_01224 0.23 -0.1
1,298,708 + MPMX26_01224 0.23 -0.5
1,298,708 + MPMX26_01224 0.23 -0.3
1,298,716 + MPMX26_01224 0.24 -1.6
1,298,716 + MPMX26_01224 0.24 +0.1
1,298,716 + MPMX26_01224 0.24 -1.1
1,298,721 + MPMX26_01224 0.24 -0.1
1,298,722 + MPMX26_01224 0.25 +0.0
1,298,722 + MPMX26_01224 0.25 +0.5
1,298,722 + MPMX26_01224 0.25 -0.0
1,298,748 + MPMX26_01224 0.28 +0.0
1,298,748 + MPMX26_01224 0.28 -0.0
1,298,748 + MPMX26_01224 0.28 -0.1
1,298,748 + MPMX26_01224 0.28 +0.4
1,298,748 + MPMX26_01224 0.28 -0.3
1,298,748 + MPMX26_01224 0.28 -0.0
1,298,748 + MPMX26_01224 0.28 +0.5
1,298,748 + MPMX26_01224 0.28 +0.1
1,298,748 + MPMX26_01224 0.28 -0.9
1,298,748 + MPMX26_01224 0.28 +0.0
1,298,767 + MPMX26_01224 0.30 -0.2
1,298,823 + MPMX26_01224 0.38 +0.2
1,298,864 + MPMX26_01224 0.43 +0.5
1,298,942 + MPMX26_01224 0.53 -0.7
1,298,942 + MPMX26_01224 0.53 -0.6
1,298,974 + MPMX26_01224 0.57 +0.2
1,298,998 + MPMX26_01224 0.60 +0.7
1,299,019 + MPMX26_01224 0.63 +0.1
1,299,019 + MPMX26_01224 0.63 -1.0
1,299,030 + MPMX26_01224 0.64 +0.1
1,299,030 + MPMX26_01224 0.64 +0.1
1,299,030 + MPMX26_01224 0.64 -0.3
1,299,030 + MPMX26_01224 0.64 +0.3
1,299,030 + MPMX26_01224 0.64 +0.4
1,299,030 + MPMX26_01224 0.64 -0.1
1,299,030 + MPMX26_01224 0.64 +0.4
1,299,030 + MPMX26_01224 0.64 -0.3
1,299,066 + MPMX26_01224 0.69 +0.3
1,299,066 + MPMX26_01224 0.69 -0.3
1,299,105 + MPMX26_01224 0.74 -0.3
1,299,118 + MPMX26_01224 0.76 +0.3
1,299,143 + MPMX26_01224 0.79 -0.4
1,299,148 + MPMX26_01224 0.80 +1.0
1,299,219 + MPMX26_01224 0.89 +0.5
1,299,231 + -0.3
1,299,235 + -0.6
1,299,338 + +0.8
1,299,399 + -0.1
1,299,472 + MPMX26_01225 0.21 -1.0
1,299,473 + MPMX26_01225 0.21 -0.2

Or see this region's nucleotide sequence