Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00294

Experiment: UV exposure at 150J/m2 for 10 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00293 and MPMX26_00294 are separated by 120 nucleotidesMPMX26_00294 and MPMX26_00295 are separated by 73 nucleotides MPMX26_00293: MPMX26_00293 - Glutamate racemase, at 324,157 to 325,026 _00293 MPMX26_00294: MPMX26_00294 - hypothetical protein, at 325,147 to 326,175 _00294 MPMX26_00295: MPMX26_00295 - Ferrochelatase, at 326,249 to 327,262 _00295 Position (kb) 325 326 327Strain fitness (log2 ratio) -1 0 1 2 3at 324.996 kb on + strandat 324.996 kb on + strandat 324.996 kb on + strandat 324.996 kb on + strandat 324.996 kb on + strandat 324.996 kb on + strandat 324.996 kb on + strandat 324.996 kb on + strandat 325.152 kb on + strandat 325.173 kb on + strandat 325.180 kb on + strandat 325.180 kb on + strandat 325.194 kb on + strandat 325.219 kb on + strandat 325.226 kb on + strandat 325.266 kb on + strand, within MPMX26_00294at 325.273 kb on + strand, within MPMX26_00294at 325.273 kb on + strand, within MPMX26_00294at 325.273 kb on + strand, within MPMX26_00294at 325.273 kb on + strand, within MPMX26_00294at 325.273 kb on + strand, within MPMX26_00294at 325.273 kb on + strand, within MPMX26_00294at 325.273 kb on + strand, within MPMX26_00294at 325.273 kb on + strand, within MPMX26_00294at 325.273 kb on + strand, within MPMX26_00294at 325.273 kb on + strand, within MPMX26_00294at 325.273 kb on + strand, within MPMX26_00294at 325.273 kb on + strand, within MPMX26_00294at 325.273 kb on + strand, within MPMX26_00294at 325.273 kb on + strand, within MPMX26_00294at 325.273 kb on + strand, within MPMX26_00294at 325.273 kb on + strand, within MPMX26_00294at 325.273 kb on + strand, within MPMX26_00294at 325.273 kb on + strand, within MPMX26_00294at 325.273 kb on + strand, within MPMX26_00294at 325.273 kb on + strand, within MPMX26_00294at 325.273 kb on + strand, within MPMX26_00294at 325.273 kb on + strand, within MPMX26_00294at 325.273 kb on + strand, within MPMX26_00294at 325.281 kb on - strand, within MPMX26_00294at 325.327 kb on + strand, within MPMX26_00294at 325.346 kb on + strand, within MPMX26_00294at 325.348 kb on + strand, within MPMX26_00294at 325.348 kb on + strand, within MPMX26_00294at 325.348 kb on + strand, within MPMX26_00294at 325.351 kb on + strand, within MPMX26_00294at 325.356 kb on + strand, within MPMX26_00294at 325.360 kb on + strand, within MPMX26_00294at 325.382 kb on + strand, within MPMX26_00294at 325.387 kb on + strand, within MPMX26_00294at 325.410 kb on + strand, within MPMX26_00294at 325.522 kb on + strand, within MPMX26_00294at 325.539 kb on + strand, within MPMX26_00294at 325.550 kb on + strand, within MPMX26_00294at 325.550 kb on + strand, within MPMX26_00294at 325.550 kb on + strand, within MPMX26_00294at 325.550 kb on + strand, within MPMX26_00294at 325.558 kb on + strand, within MPMX26_00294at 325.601 kb on + strand, within MPMX26_00294at 325.613 kb on + strand, within MPMX26_00294at 325.613 kb on + strand, within MPMX26_00294at 325.618 kb on + strand, within MPMX26_00294at 325.618 kb on + strand, within MPMX26_00294at 325.618 kb on + strand, within MPMX26_00294at 325.618 kb on + strand, within MPMX26_00294at 325.664 kb on + strand, within MPMX26_00294at 325.695 kb on + strand, within MPMX26_00294at 325.695 kb on + strand, within MPMX26_00294at 325.703 kb on + strand, within MPMX26_00294at 325.715 kb on + strand, within MPMX26_00294at 325.715 kb on + strand, within MPMX26_00294at 325.723 kb on - strand, within MPMX26_00294at 325.772 kb on + strand, within MPMX26_00294at 325.774 kb on + strand, within MPMX26_00294at 325.782 kb on - strand, within MPMX26_00294at 325.816 kb on + strand, within MPMX26_00294at 325.844 kb on + strand, within MPMX26_00294at 325.861 kb on + strand, within MPMX26_00294at 325.861 kb on + strand, within MPMX26_00294at 325.875 kb on + strand, within MPMX26_00294at 325.972 kb on + strand, within MPMX26_00294at 325.979 kb on + strand, within MPMX26_00294at 325.987 kb on + strand, within MPMX26_00294at 326.049 kb on + strand, within MPMX26_00294at 326.063 kb on + strand, within MPMX26_00294

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 10 seconds
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324,996 + -0.7
324,996 + +0.8
324,996 + +0.1
324,996 + +0.2
324,996 + -0.3
324,996 + +0.4
324,996 + -0.5
324,996 + +0.9
325,152 + +0.4
325,173 + +0.4
325,180 + +0.6
325,180 + +0.6
325,194 + -0.1
325,219 + +0.4
325,226 + +0.4
325,266 + MPMX26_00294 0.12 +0.6
325,273 + MPMX26_00294 0.12 +0.8
325,273 + MPMX26_00294 0.12 +0.6
325,273 + MPMX26_00294 0.12 +0.3
325,273 + MPMX26_00294 0.12 +0.5
325,273 + MPMX26_00294 0.12 +0.1
325,273 + MPMX26_00294 0.12 +0.1
325,273 + MPMX26_00294 0.12 +0.4
325,273 + MPMX26_00294 0.12 +0.7
325,273 + MPMX26_00294 0.12 +0.2
325,273 + MPMX26_00294 0.12 +0.4
325,273 + MPMX26_00294 0.12 +0.9
325,273 + MPMX26_00294 0.12 +1.1
325,273 + MPMX26_00294 0.12 +0.8
325,273 + MPMX26_00294 0.12 +0.8
325,273 + MPMX26_00294 0.12 -1.0
325,273 + MPMX26_00294 0.12 +0.5
325,273 + MPMX26_00294 0.12 +0.3
325,273 + MPMX26_00294 0.12 -0.0
325,273 + MPMX26_00294 0.12 +0.7
325,273 + MPMX26_00294 0.12 +1.0
325,273 + MPMX26_00294 0.12 +0.2
325,273 + MPMX26_00294 0.12 +1.0
325,273 + MPMX26_00294 0.12 +0.7
325,281 - MPMX26_00294 0.13 +1.3
325,327 + MPMX26_00294 0.17 +0.5
325,346 + MPMX26_00294 0.19 +0.6
325,348 + MPMX26_00294 0.20 +0.8
325,348 + MPMX26_00294 0.20 +0.7
325,348 + MPMX26_00294 0.20 +0.6
325,351 + MPMX26_00294 0.20 -0.0
325,356 + MPMX26_00294 0.20 +0.8
325,360 + MPMX26_00294 0.21 +0.6
325,382 + MPMX26_00294 0.23 +0.9
325,387 + MPMX26_00294 0.23 -0.1
325,410 + MPMX26_00294 0.26 +0.4
325,522 + MPMX26_00294 0.36 +0.4
325,539 + MPMX26_00294 0.38 +0.6
325,550 + MPMX26_00294 0.39 +2.2
325,550 + MPMX26_00294 0.39 +1.6
325,550 + MPMX26_00294 0.39 +0.7
325,550 + MPMX26_00294 0.39 -0.1
325,558 + MPMX26_00294 0.40 +0.7
325,601 + MPMX26_00294 0.44 +1.0
325,613 + MPMX26_00294 0.45 +0.7
325,613 + MPMX26_00294 0.45 +1.6
325,618 + MPMX26_00294 0.46 +0.2
325,618 + MPMX26_00294 0.46 +0.8
325,618 + MPMX26_00294 0.46 +0.1
325,618 + MPMX26_00294 0.46 +0.3
325,664 + MPMX26_00294 0.50 +1.0
325,695 + MPMX26_00294 0.53 +0.3
325,695 + MPMX26_00294 0.53 +0.2
325,703 + MPMX26_00294 0.54 +0.9
325,715 + MPMX26_00294 0.55 +0.3
325,715 + MPMX26_00294 0.55 +0.3
325,723 - MPMX26_00294 0.56 +0.3
325,772 + MPMX26_00294 0.61 -0.0
325,774 + MPMX26_00294 0.61 +0.7
325,782 - MPMX26_00294 0.62 +0.8
325,816 + MPMX26_00294 0.65 +3.3
325,844 + MPMX26_00294 0.68 +0.8
325,861 + MPMX26_00294 0.69 +0.5
325,861 + MPMX26_00294 0.69 +0.3
325,875 + MPMX26_00294 0.71 +0.0
325,972 + MPMX26_00294 0.80 +0.5
325,979 + MPMX26_00294 0.81 +0.8
325,987 + MPMX26_00294 0.82 -0.4
326,049 + MPMX26_00294 0.88 +0.9
326,063 + MPMX26_00294 0.89 +0.7

Or see this region's nucleotide sequence