Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00241

Experiment: UV exposure at 150J/m2 for 10 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00240 and MPMX26_00241 are separated by 103 nucleotidesMPMX26_00241 and MPMX26_00242 are separated by 24 nucleotidesMPMX26_00242 and MPMX26_00243 overlap by 4 nucleotides MPMX26_00240: MPMX26_00240 - Pyrimidine/purine nucleoside phosphorylase, at 261,436 to 261,759 _00240 MPMX26_00241: MPMX26_00241 - 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB, at 261,863 to 262,618 _00241 MPMX26_00242: MPMX26_00242 - hypothetical protein, at 262,643 to 263,578 _00242 MPMX26_00243: MPMX26_00243 - Dephospho-CoA kinase, at 263,575 to 264,186 _00243 Position (kb) 261 262 263Strain fitness (log2 ratio) -2 -1 0 1 2at 260.865 kb on - strandat 260.865 kb on - strandat 260.865 kb on - strandat 260.865 kb on - strandat 260.865 kb on - strandat 260.880 kb on - strandat 260.890 kb on - strandat 260.981 kb on - strandat 261.000 kb on + strandat 261.056 kb on - strandat 261.178 kb on - strandat 261.217 kb on + strandat 261.256 kb on + strandat 261.261 kb on + strandat 261.283 kb on + strandat 261.283 kb on + strandat 261.295 kb on + strandat 261.295 kb on + strandat 261.295 kb on + strandat 261.309 kb on + strandat 261.437 kb on + strandat 261.437 kb on + strandat 261.437 kb on + strandat 261.437 kb on + strandat 261.437 kb on + strandat 261.437 kb on + strandat 261.437 kb on + strandat 261.437 kb on + strandat 261.437 kb on + strandat 261.445 kb on - strandat 261.447 kb on + strandat 261.619 kb on + strand, within MPMX26_00240at 261.653 kb on + strand, within MPMX26_00240at 261.658 kb on + strand, within MPMX26_00240at 261.658 kb on + strand, within MPMX26_00240at 261.658 kb on + strand, within MPMX26_00240at 261.658 kb on + strand, within MPMX26_00240at 261.663 kb on + strand, within MPMX26_00240at 261.663 kb on + strand, within MPMX26_00240at 261.663 kb on + strand, within MPMX26_00240at 261.663 kb on + strand, within MPMX26_00240at 261.663 kb on + strand, within MPMX26_00240at 261.663 kb on + strand, within MPMX26_00240at 261.663 kb on + strand, within MPMX26_00240at 261.663 kb on + strand, within MPMX26_00240at 261.663 kb on + strand, within MPMX26_00240at 261.663 kb on + strand, within MPMX26_00240at 261.688 kb on + strand, within MPMX26_00240at 261.781 kb on + strandat 261.781 kb on + strandat 261.786 kb on + strandat 261.791 kb on + strandat 261.791 kb on + strandat 261.791 kb on + strandat 261.791 kb on + strandat 261.792 kb on + strandat 261.796 kb on + strandat 261.841 kb on + strandat 261.872 kb on + strandat 261.948 kb on + strand, within MPMX26_00241at 261.948 kb on + strand, within MPMX26_00241at 261.965 kb on + strand, within MPMX26_00241at 261.994 kb on + strand, within MPMX26_00241at 262.038 kb on + strand, within MPMX26_00241at 262.143 kb on + strand, within MPMX26_00241at 262.143 kb on + strand, within MPMX26_00241at 262.208 kb on + strand, within MPMX26_00241at 262.227 kb on + strand, within MPMX26_00241at 262.236 kb on + strand, within MPMX26_00241at 262.256 kb on + strand, within MPMX26_00241at 262.266 kb on + strand, within MPMX26_00241at 262.266 kb on + strand, within MPMX26_00241at 262.266 kb on + strand, within MPMX26_00241at 262.289 kb on + strand, within MPMX26_00241at 262.347 kb on + strand, within MPMX26_00241at 262.347 kb on + strand, within MPMX26_00241at 262.347 kb on + strand, within MPMX26_00241at 262.347 kb on + strand, within MPMX26_00241at 262.357 kb on + strand, within MPMX26_00241at 262.357 kb on + strand, within MPMX26_00241at 262.357 kb on + strand, within MPMX26_00241at 262.384 kb on + strand, within MPMX26_00241at 262.425 kb on + strand, within MPMX26_00241at 262.430 kb on + strand, within MPMX26_00241at 262.435 kb on + strand, within MPMX26_00241at 262.440 kb on + strand, within MPMX26_00241at 262.440 kb on + strand, within MPMX26_00241at 262.440 kb on + strand, within MPMX26_00241at 262.440 kb on + strand, within MPMX26_00241at 262.440 kb on + strand, within MPMX26_00241at 262.440 kb on + strand, within MPMX26_00241at 262.440 kb on + strand, within MPMX26_00241at 262.440 kb on + strand, within MPMX26_00241at 262.440 kb on + strand, within MPMX26_00241at 262.440 kb on + strand, within MPMX26_00241at 262.440 kb on + strand, within MPMX26_00241at 262.440 kb on + strand, within MPMX26_00241at 262.442 kb on + strand, within MPMX26_00241at 262.442 kb on + strand, within MPMX26_00241at 262.461 kb on + strand, within MPMX26_00241at 262.461 kb on + strand, within MPMX26_00241at 262.461 kb on + strand, within MPMX26_00241at 262.461 kb on + strand, within MPMX26_00241at 262.489 kb on + strand, within MPMX26_00241at 262.491 kb on + strand, within MPMX26_00241at 262.491 kb on + strand, within MPMX26_00241at 262.491 kb on + strand, within MPMX26_00241at 262.491 kb on + strand, within MPMX26_00241at 262.491 kb on + strand, within MPMX26_00241at 262.491 kb on + strand, within MPMX26_00241at 262.491 kb on + strand, within MPMX26_00241at 262.491 kb on + strand, within MPMX26_00241at 262.491 kb on + strand, within MPMX26_00241at 262.491 kb on + strand, within MPMX26_00241at 262.491 kb on + strand, within MPMX26_00241at 262.495 kb on + strand, within MPMX26_00241at 262.545 kb on + strandat 262.566 kb on + strandat 262.569 kb on + strandat 262.569 kb on + strandat 262.569 kb on + strandat 262.569 kb on + strandat 262.579 kb on + strandat 262.611 kb on + strandat 262.641 kb on + strandat 262.654 kb on + strandat 262.654 kb on + strandat 262.654 kb on + strandat 262.655 kb on + strandat 262.743 kb on + strand, within MPMX26_00242at 262.772 kb on + strand, within MPMX26_00242at 262.772 kb on + strand, within MPMX26_00242at 262.838 kb on + strand, within MPMX26_00242at 262.847 kb on + strand, within MPMX26_00242at 262.847 kb on + strand, within MPMX26_00242at 262.869 kb on + strand, within MPMX26_00242at 262.869 kb on + strand, within MPMX26_00242at 262.879 kb on + strand, within MPMX26_00242at 262.879 kb on + strand, within MPMX26_00242at 262.879 kb on + strand, within MPMX26_00242at 262.879 kb on + strand, within MPMX26_00242at 262.881 kb on + strand, within MPMX26_00242at 262.881 kb on + strand, within MPMX26_00242at 262.881 kb on + strand, within MPMX26_00242at 262.896 kb on + strand, within MPMX26_00242at 262.913 kb on + strand, within MPMX26_00242at 262.913 kb on + strand, within MPMX26_00242at 262.952 kb on + strand, within MPMX26_00242at 262.952 kb on + strand, within MPMX26_00242at 262.952 kb on + strand, within MPMX26_00242at 262.952 kb on + strand, within MPMX26_00242at 262.952 kb on + strand, within MPMX26_00242at 262.957 kb on + strand, within MPMX26_00242at 262.957 kb on + strand, within MPMX26_00242at 263.005 kb on + strand, within MPMX26_00242at 263.005 kb on + strand, within MPMX26_00242at 263.019 kb on + strand, within MPMX26_00242at 263.019 kb on + strand, within MPMX26_00242at 263.019 kb on + strand, within MPMX26_00242at 263.048 kb on + strand, within MPMX26_00242at 263.048 kb on + strand, within MPMX26_00242at 263.048 kb on + strand, within MPMX26_00242at 263.048 kb on + strand, within MPMX26_00242at 263.069 kb on + strand, within MPMX26_00242at 263.079 kb on + strand, within MPMX26_00242at 263.079 kb on + strand, within MPMX26_00242at 263.079 kb on + strand, within MPMX26_00242at 263.079 kb on + strand, within MPMX26_00242at 263.108 kb on + strand, within MPMX26_00242at 263.122 kb on + strand, within MPMX26_00242at 263.144 kb on + strand, within MPMX26_00242at 263.149 kb on + strand, within MPMX26_00242at 263.183 kb on + strand, within MPMX26_00242at 263.207 kb on + strand, within MPMX26_00242at 263.207 kb on + strand, within MPMX26_00242at 263.207 kb on + strand, within MPMX26_00242at 263.207 kb on + strand, within MPMX26_00242at 263.207 kb on + strand, within MPMX26_00242at 263.207 kb on + strand, within MPMX26_00242at 263.230 kb on + strand, within MPMX26_00242at 263.259 kb on + strand, within MPMX26_00242at 263.260 kb on + strand, within MPMX26_00242at 263.260 kb on + strand, within MPMX26_00242at 263.260 kb on + strand, within MPMX26_00242at 263.282 kb on + strand, within MPMX26_00242at 263.350 kb on + strand, within MPMX26_00242at 263.413 kb on + strand, within MPMX26_00242at 263.415 kb on + strand, within MPMX26_00242at 263.415 kb on + strand, within MPMX26_00242at 263.445 kb on + strand, within MPMX26_00242at 263.483 kb on + strand, within MPMX26_00242at 263.555 kb on + strandat 263.555 kb on + strandat 263.555 kb on + strandat 263.563 kb on - strandat 263.572 kb on + strandat 263.580 kb on - strandat 263.605 kb on - strandat 263.614 kb on - strandat 263.614 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 10 seconds
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260,865 - -1.1
260,865 - -0.4
260,865 - -0.4
260,865 - +0.1
260,865 - -1.4
260,880 - +0.1
260,890 - -0.2
260,981 - -0.1
261,000 + +0.5
261,056 - +0.3
261,178 - +0.2
261,217 + +0.3
261,256 + -0.5
261,261 + -0.4
261,283 + +0.9
261,283 + +0.5
261,295 + -0.0
261,295 + -1.1
261,295 + -0.5
261,309 + -0.3
261,437 + +0.9
261,437 + -0.7
261,437 + -0.7
261,437 + +0.2
261,437 + +0.7
261,437 + +0.1
261,437 + +0.2
261,437 + +0.8
261,437 + -0.3
261,445 - +0.2
261,447 + +0.7
261,619 + MPMX26_00240 0.56 +0.0
261,653 + MPMX26_00240 0.67 -0.5
261,658 + MPMX26_00240 0.69 +0.3
261,658 + MPMX26_00240 0.69 -1.0
261,658 + MPMX26_00240 0.69 +0.4
261,658 + MPMX26_00240 0.69 -0.3
261,663 + MPMX26_00240 0.70 -0.3
261,663 + MPMX26_00240 0.70 -0.3
261,663 + MPMX26_00240 0.70 +0.2
261,663 + MPMX26_00240 0.70 +0.8
261,663 + MPMX26_00240 0.70 +0.2
261,663 + MPMX26_00240 0.70 -0.4
261,663 + MPMX26_00240 0.70 +0.2
261,663 + MPMX26_00240 0.70 -1.2
261,663 + MPMX26_00240 0.70 -0.4
261,663 + MPMX26_00240 0.70 -0.0
261,688 + MPMX26_00240 0.78 -0.2
261,781 + +0.1
261,781 + -0.5
261,786 + +0.5
261,791 + -0.2
261,791 + -0.1
261,791 + +0.6
261,791 + -0.0
261,792 + -0.1
261,796 + -0.1
261,841 + +0.4
261,872 + +0.1
261,948 + MPMX26_00241 0.11 -0.9
261,948 + MPMX26_00241 0.11 -0.7
261,965 + MPMX26_00241 0.13 -0.6
261,994 + MPMX26_00241 0.17 +0.1
262,038 + MPMX26_00241 0.23 +0.2
262,143 + MPMX26_00241 0.37 -0.3
262,143 + MPMX26_00241 0.37 -0.1
262,208 + MPMX26_00241 0.46 -0.9
262,227 + MPMX26_00241 0.48 -0.0
262,236 + MPMX26_00241 0.49 -0.8
262,256 + MPMX26_00241 0.52 -0.0
262,266 + MPMX26_00241 0.53 -0.1
262,266 + MPMX26_00241 0.53 -0.3
262,266 + MPMX26_00241 0.53 -0.6
262,289 + MPMX26_00241 0.56 +0.1
262,347 + MPMX26_00241 0.64 -0.1
262,347 + MPMX26_00241 0.64 -1.1
262,347 + MPMX26_00241 0.64 -0.5
262,347 + MPMX26_00241 0.64 +0.5
262,357 + MPMX26_00241 0.65 -0.3
262,357 + MPMX26_00241 0.65 -0.3
262,357 + MPMX26_00241 0.65 -0.7
262,384 + MPMX26_00241 0.69 +0.2
262,425 + MPMX26_00241 0.74 -0.4
262,430 + MPMX26_00241 0.75 -0.0
262,435 + MPMX26_00241 0.76 +0.3
262,440 + MPMX26_00241 0.76 +0.6
262,440 + MPMX26_00241 0.76 -1.9
262,440 + MPMX26_00241 0.76 -1.1
262,440 + MPMX26_00241 0.76 -1.6
262,440 + MPMX26_00241 0.76 -0.5
262,440 + MPMX26_00241 0.76 -0.7
262,440 + MPMX26_00241 0.76 -0.4
262,440 + MPMX26_00241 0.76 -0.9
262,440 + MPMX26_00241 0.76 -0.6
262,440 + MPMX26_00241 0.76 -0.5
262,440 + MPMX26_00241 0.76 -0.8
262,440 + MPMX26_00241 0.76 -0.5
262,442 + MPMX26_00241 0.77 -0.7
262,442 + MPMX26_00241 0.77 -0.1
262,461 + MPMX26_00241 0.79 -0.0
262,461 + MPMX26_00241 0.79 -1.7
262,461 + MPMX26_00241 0.79 -0.5
262,461 + MPMX26_00241 0.79 -0.1
262,489 + MPMX26_00241 0.83 +0.2
262,491 + MPMX26_00241 0.83 -0.2
262,491 + MPMX26_00241 0.83 -0.0
262,491 + MPMX26_00241 0.83 +0.2
262,491 + MPMX26_00241 0.83 -0.7
262,491 + MPMX26_00241 0.83 -0.1
262,491 + MPMX26_00241 0.83 -0.1
262,491 + MPMX26_00241 0.83 -0.3
262,491 + MPMX26_00241 0.83 -0.5
262,491 + MPMX26_00241 0.83 +0.2
262,491 + MPMX26_00241 0.83 +0.4
262,491 + MPMX26_00241 0.83 -0.5
262,495 + MPMX26_00241 0.84 -0.7
262,545 + +0.1
262,566 + -0.9
262,569 + +0.3
262,569 + +0.4
262,569 + -1.6
262,569 + -0.7
262,579 + -0.6
262,611 + +0.7
262,641 + +0.7
262,654 + -0.8
262,654 + -0.4
262,654 + -0.1
262,655 + -0.8
262,743 + MPMX26_00242 0.11 -0.4
262,772 + MPMX26_00242 0.14 +0.1
262,772 + MPMX26_00242 0.14 -0.8
262,838 + MPMX26_00242 0.21 -0.0
262,847 + MPMX26_00242 0.22 +0.5
262,847 + MPMX26_00242 0.22 +0.2
262,869 + MPMX26_00242 0.24 +0.2
262,869 + MPMX26_00242 0.24 +0.5
262,879 + MPMX26_00242 0.25 -0.9
262,879 + MPMX26_00242 0.25 -0.4
262,879 + MPMX26_00242 0.25 +0.0
262,879 + MPMX26_00242 0.25 -0.3
262,881 + MPMX26_00242 0.25 -0.2
262,881 + MPMX26_00242 0.25 -0.9
262,881 + MPMX26_00242 0.25 -0.1
262,896 + MPMX26_00242 0.27 -0.1
262,913 + MPMX26_00242 0.29 -0.5
262,913 + MPMX26_00242 0.29 -0.1
262,952 + MPMX26_00242 0.33 +0.2
262,952 + MPMX26_00242 0.33 +0.2
262,952 + MPMX26_00242 0.33 -0.4
262,952 + MPMX26_00242 0.33 +0.4
262,952 + MPMX26_00242 0.33 -0.2
262,957 + MPMX26_00242 0.34 -0.6
262,957 + MPMX26_00242 0.34 +0.5
263,005 + MPMX26_00242 0.39 -0.3
263,005 + MPMX26_00242 0.39 -0.1
263,019 + MPMX26_00242 0.40 +1.9
263,019 + MPMX26_00242 0.40 +0.5
263,019 + MPMX26_00242 0.40 -0.5
263,048 + MPMX26_00242 0.43 -0.2
263,048 + MPMX26_00242 0.43 +0.7
263,048 + MPMX26_00242 0.43 -0.2
263,048 + MPMX26_00242 0.43 -1.1
263,069 + MPMX26_00242 0.46 -1.1
263,079 + MPMX26_00242 0.47 -0.1
263,079 + MPMX26_00242 0.47 -0.2
263,079 + MPMX26_00242 0.47 +0.2
263,079 + MPMX26_00242 0.47 +0.6
263,108 + MPMX26_00242 0.50 +1.5
263,122 + MPMX26_00242 0.51 +0.2
263,144 + MPMX26_00242 0.54 -0.4
263,149 + MPMX26_00242 0.54 -0.8
263,183 + MPMX26_00242 0.58 -0.3
263,207 + MPMX26_00242 0.60 +0.2
263,207 + MPMX26_00242 0.60 +0.7
263,207 + MPMX26_00242 0.60 +0.1
263,207 + MPMX26_00242 0.60 -0.3
263,207 + MPMX26_00242 0.60 +0.2
263,207 + MPMX26_00242 0.60 +0.1
263,230 + MPMX26_00242 0.63 -0.6
263,259 + MPMX26_00242 0.66 +0.2
263,260 + MPMX26_00242 0.66 +0.3
263,260 + MPMX26_00242 0.66 -0.0
263,260 + MPMX26_00242 0.66 -1.1
263,282 + MPMX26_00242 0.68 -0.0
263,350 + MPMX26_00242 0.76 -0.2
263,413 + MPMX26_00242 0.82 +0.4
263,415 + MPMX26_00242 0.82 -0.5
263,415 + MPMX26_00242 0.82 +0.3
263,445 + MPMX26_00242 0.86 +0.3
263,483 + MPMX26_00242 0.90 +0.0
263,555 + +0.1
263,555 + -0.1
263,555 + +0.6
263,563 - -0.2
263,572 + +1.9
263,580 - +1.1
263,605 - +0.2
263,614 - -1.9
263,614 - +0.2

Or see this region's nucleotide sequence