Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS03165

Experiment: R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS03160 and ABZR88_RS03165 are separated by 86 nucleotidesABZR88_RS03165 and ABZR88_RS03170 are separated by 132 nucleotides ABZR88_RS03160: ABZR88_RS03160 - glycoside hydrolase family 3 C-terminal domain-containing protein, at 761,642 to 763,804 _RS03160 ABZR88_RS03165: ABZR88_RS03165 - hypothetical protein, at 763,891 to 764,088 _RS03165 ABZR88_RS03170: ABZR88_RS03170 - glycoside hydrolase family 88 protein, at 764,221 to 765,426 _RS03170 Position (kb) 763 764 765Strain fitness (log2 ratio) -1 0 1at 763.217 kb on + strand, within ABZR88_RS03160at 763.218 kb on - strand, within ABZR88_RS03160at 763.353 kb on + strand, within ABZR88_RS03160at 763.353 kb on + strand, within ABZR88_RS03160at 763.788 kb on - strandat 763.821 kb on - strandat 764.044 kb on - strand, within ABZR88_RS03165at 764.087 kb on - strandat 764.127 kb on + strandat 764.127 kb on + strandat 764.185 kb on + strandat 764.489 kb on - strand, within ABZR88_RS03170at 764.602 kb on + strand, within ABZR88_RS03170at 764.603 kb on - strand, within ABZR88_RS03170at 764.631 kb on - strand, within ABZR88_RS03170at 764.761 kb on - strand, within ABZR88_RS03170at 764.823 kb on + strand, within ABZR88_RS03170at 764.879 kb on - strand, within ABZR88_RS03170at 764.880 kb on + strand, within ABZR88_RS03170at 764.937 kb on + strand, within ABZR88_RS03170at 765.001 kb on + strand, within ABZR88_RS03170at 765.001 kb on + strand, within ABZR88_RS03170at 765.001 kb on + strand, within ABZR88_RS03170

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A with 6-methoxy-2(3H)-benzoxazolone 0.5 mM
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763,217 + ABZR88_RS03160 0.73 -0.6
763,218 - ABZR88_RS03160 0.73 -0.4
763,353 + ABZR88_RS03160 0.79 +0.7
763,353 + ABZR88_RS03160 0.79 -0.1
763,788 - -0.7
763,821 - +0.1
764,044 - ABZR88_RS03165 0.77 +0.0
764,087 - +0.3
764,127 + -0.6
764,127 + -0.3
764,185 + +0.1
764,489 - ABZR88_RS03170 0.22 -0.5
764,602 + ABZR88_RS03170 0.32 -0.3
764,603 - ABZR88_RS03170 0.32 -0.1
764,631 - ABZR88_RS03170 0.34 -0.2
764,761 - ABZR88_RS03170 0.45 -0.3
764,823 + ABZR88_RS03170 0.50 +0.4
764,879 - ABZR88_RS03170 0.55 -0.3
764,880 + ABZR88_RS03170 0.55 +0.0
764,937 + ABZR88_RS03170 0.59 -0.8
765,001 + ABZR88_RS03170 0.65 -0.3
765,001 + ABZR88_RS03170 0.65 -0.3
765,001 + ABZR88_RS03170 0.65 -0.4

Or see this region's nucleotide sequence