Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03026

Experiment: UV exposure at 150J/m2 for 10 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03025 and MPMX26_03026 are separated by 72 nucleotidesMPMX26_03026 and MPMX26_03027 are separated by 235 nucleotidesMPMX26_03027 and MPMX26_03028 are separated by 107 nucleotides MPMX26_03025: MPMX26_03025 - hypothetical protein, at 3,144,370 to 3,145,062 _03025 MPMX26_03026: MPMX26_03026 - hypothetical protein, at 3,145,135 to 3,146,220 _03026 MPMX26_03027: MPMX26_03027 - General stress protein 18, at 3,146,456 to 3,147,001 _03027 MPMX26_03028: MPMX26_03028 - 5S ribosomal RNA, at 3,147,109 to 3,147,219 _03028 Position (kb) 3145 3146 3147Strain fitness (log2 ratio) -2 -1 0 1at 3144.450 kb on + strand, within MPMX26_03025at 3144.450 kb on + strand, within MPMX26_03025at 3144.450 kb on + strand, within MPMX26_03025at 3144.460 kb on + strand, within MPMX26_03025at 3144.468 kb on + strand, within MPMX26_03025at 3144.473 kb on + strand, within MPMX26_03025at 3144.483 kb on + strand, within MPMX26_03025at 3144.643 kb on + strand, within MPMX26_03025at 3144.648 kb on + strand, within MPMX26_03025at 3144.663 kb on + strand, within MPMX26_03025at 3144.679 kb on + strand, within MPMX26_03025at 3144.766 kb on + strand, within MPMX26_03025at 3144.766 kb on + strand, within MPMX26_03025at 3144.768 kb on + strand, within MPMX26_03025at 3144.787 kb on + strand, within MPMX26_03025at 3144.787 kb on + strand, within MPMX26_03025at 3144.792 kb on + strand, within MPMX26_03025at 3144.797 kb on + strand, within MPMX26_03025at 3144.802 kb on + strand, within MPMX26_03025at 3144.811 kb on + strand, within MPMX26_03025at 3144.822 kb on + strand, within MPMX26_03025at 3144.826 kb on + strand, within MPMX26_03025at 3144.855 kb on + strand, within MPMX26_03025at 3145.023 kb on + strandat 3145.030 kb on + strandat 3145.200 kb on + strandat 3145.210 kb on + strandat 3145.210 kb on + strandat 3145.308 kb on + strand, within MPMX26_03026at 3145.308 kb on + strand, within MPMX26_03026at 3145.336 kb on + strand, within MPMX26_03026at 3145.341 kb on + strand, within MPMX26_03026at 3145.341 kb on + strand, within MPMX26_03026at 3145.342 kb on + strand, within MPMX26_03026at 3145.380 kb on + strand, within MPMX26_03026at 3145.380 kb on + strand, within MPMX26_03026at 3145.380 kb on + strand, within MPMX26_03026at 3145.422 kb on + strand, within MPMX26_03026at 3145.443 kb on + strand, within MPMX26_03026at 3145.443 kb on + strand, within MPMX26_03026at 3145.443 kb on + strand, within MPMX26_03026at 3145.497 kb on + strand, within MPMX26_03026at 3145.497 kb on + strand, within MPMX26_03026at 3145.538 kb on + strand, within MPMX26_03026at 3145.538 kb on + strand, within MPMX26_03026at 3145.580 kb on + strand, within MPMX26_03026at 3145.662 kb on + strand, within MPMX26_03026at 3145.662 kb on + strand, within MPMX26_03026at 3145.735 kb on + strand, within MPMX26_03026at 3145.737 kb on + strand, within MPMX26_03026at 3145.740 kb on + strand, within MPMX26_03026at 3145.740 kb on + strand, within MPMX26_03026at 3145.740 kb on + strand, within MPMX26_03026at 3145.742 kb on + strand, within MPMX26_03026at 3145.795 kb on + strand, within MPMX26_03026at 3145.800 kb on + strand, within MPMX26_03026at 3145.800 kb on + strand, within MPMX26_03026at 3145.800 kb on + strand, within MPMX26_03026at 3145.800 kb on + strand, within MPMX26_03026at 3145.800 kb on + strand, within MPMX26_03026at 3145.800 kb on + strand, within MPMX26_03026at 3145.807 kb on + strand, within MPMX26_03026at 3145.807 kb on + strand, within MPMX26_03026at 3145.826 kb on + strand, within MPMX26_03026at 3145.836 kb on + strand, within MPMX26_03026at 3145.836 kb on + strand, within MPMX26_03026at 3145.836 kb on + strand, within MPMX26_03026at 3145.843 kb on + strand, within MPMX26_03026at 3145.848 kb on + strand, within MPMX26_03026at 3145.870 kb on + strand, within MPMX26_03026at 3145.906 kb on + strand, within MPMX26_03026at 3145.913 kb on + strand, within MPMX26_03026at 3145.938 kb on + strand, within MPMX26_03026at 3145.944 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.973 kb on + strand, within MPMX26_03026at 3145.973 kb on + strand, within MPMX26_03026at 3145.981 kb on - strand, within MPMX26_03026at 3145.987 kb on + strand, within MPMX26_03026at 3146.068 kb on + strand, within MPMX26_03026at 3146.068 kb on + strand, within MPMX26_03026at 3146.068 kb on + strand, within MPMX26_03026at 3146.094 kb on + strand, within MPMX26_03026at 3146.118 kb on + strandat 3146.146 kb on + strandat 3146.146 kb on + strandat 3146.146 kb on + strandat 3146.146 kb on + strandat 3146.151 kb on + strandat 3146.617 kb on + strand, within MPMX26_03027at 3146.888 kb on + strand, within MPMX26_03027at 3147.085 kb on - strandat 3147.088 kb on - strandat 3147.089 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 10 seconds
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3,144,450 + MPMX26_03025 0.12 -0.1
3,144,450 + MPMX26_03025 0.12 -0.1
3,144,450 + MPMX26_03025 0.12 +0.2
3,144,460 + MPMX26_03025 0.13 -0.4
3,144,468 + MPMX26_03025 0.14 -1.1
3,144,473 + MPMX26_03025 0.15 +0.0
3,144,483 + MPMX26_03025 0.16 -0.0
3,144,643 + MPMX26_03025 0.39 +0.4
3,144,648 + MPMX26_03025 0.40 -0.5
3,144,663 + MPMX26_03025 0.42 +0.3
3,144,679 + MPMX26_03025 0.45 +0.5
3,144,766 + MPMX26_03025 0.57 +0.1
3,144,766 + MPMX26_03025 0.57 +0.5
3,144,768 + MPMX26_03025 0.57 -1.0
3,144,787 + MPMX26_03025 0.60 -0.2
3,144,787 + MPMX26_03025 0.60 +0.9
3,144,792 + MPMX26_03025 0.61 +0.1
3,144,797 + MPMX26_03025 0.62 +0.5
3,144,802 + MPMX26_03025 0.62 -0.1
3,144,811 + MPMX26_03025 0.64 -0.8
3,144,822 + MPMX26_03025 0.65 -1.3
3,144,826 + MPMX26_03025 0.66 +0.6
3,144,855 + MPMX26_03025 0.70 +0.5
3,145,023 + +0.1
3,145,030 + +0.6
3,145,200 + -0.6
3,145,210 + -1.2
3,145,210 + +0.0
3,145,308 + MPMX26_03026 0.16 +1.2
3,145,308 + MPMX26_03026 0.16 +1.3
3,145,336 + MPMX26_03026 0.19 +0.5
3,145,341 + MPMX26_03026 0.19 +0.4
3,145,341 + MPMX26_03026 0.19 +0.2
3,145,342 + MPMX26_03026 0.19 +0.2
3,145,380 + MPMX26_03026 0.23 -1.0
3,145,380 + MPMX26_03026 0.23 +0.3
3,145,380 + MPMX26_03026 0.23 -0.6
3,145,422 + MPMX26_03026 0.26 +1.4
3,145,443 + MPMX26_03026 0.28 +0.2
3,145,443 + MPMX26_03026 0.28 -0.4
3,145,443 + MPMX26_03026 0.28 -0.6
3,145,497 + MPMX26_03026 0.33 +0.3
3,145,497 + MPMX26_03026 0.33 +0.5
3,145,538 + MPMX26_03026 0.37 +0.1
3,145,538 + MPMX26_03026 0.37 -0.8
3,145,580 + MPMX26_03026 0.41 +0.0
3,145,662 + MPMX26_03026 0.49 +0.1
3,145,662 + MPMX26_03026 0.49 -0.1
3,145,735 + MPMX26_03026 0.55 +0.5
3,145,737 + MPMX26_03026 0.55 +0.3
3,145,740 + MPMX26_03026 0.56 +0.6
3,145,740 + MPMX26_03026 0.56 +0.8
3,145,740 + MPMX26_03026 0.56 -2.5
3,145,742 + MPMX26_03026 0.56 -0.7
3,145,795 + MPMX26_03026 0.61 +1.0
3,145,800 + MPMX26_03026 0.61 -2.3
3,145,800 + MPMX26_03026 0.61 -0.9
3,145,800 + MPMX26_03026 0.61 -0.2
3,145,800 + MPMX26_03026 0.61 -1.7
3,145,800 + MPMX26_03026 0.61 -0.1
3,145,800 + MPMX26_03026 0.61 -0.9
3,145,807 + MPMX26_03026 0.62 +0.2
3,145,807 + MPMX26_03026 0.62 +0.5
3,145,826 + MPMX26_03026 0.64 +1.3
3,145,836 + MPMX26_03026 0.65 +0.1
3,145,836 + MPMX26_03026 0.65 +0.5
3,145,836 + MPMX26_03026 0.65 -0.7
3,145,843 + MPMX26_03026 0.65 +1.5
3,145,848 + MPMX26_03026 0.66 -0.5
3,145,870 + MPMX26_03026 0.68 +0.5
3,145,906 + MPMX26_03026 0.71 -0.5
3,145,913 + MPMX26_03026 0.72 -0.5
3,145,938 + MPMX26_03026 0.74 +0.2
3,145,944 + MPMX26_03026 0.74 +0.2
3,145,966 + MPMX26_03026 0.77 +0.2
3,145,966 + MPMX26_03026 0.77 +1.2
3,145,966 + MPMX26_03026 0.77 +0.5
3,145,966 + MPMX26_03026 0.77 +0.3
3,145,966 + MPMX26_03026 0.77 -0.3
3,145,966 + MPMX26_03026 0.77 -0.2
3,145,966 + MPMX26_03026 0.77 -0.5
3,145,966 + MPMX26_03026 0.77 +0.7
3,145,966 + MPMX26_03026 0.77 +0.2
3,145,966 + MPMX26_03026 0.77 -1.0
3,145,966 + MPMX26_03026 0.77 -0.1
3,145,966 + MPMX26_03026 0.77 +0.6
3,145,966 + MPMX26_03026 0.77 -0.1
3,145,966 + MPMX26_03026 0.77 -1.0
3,145,966 + MPMX26_03026 0.77 +1.2
3,145,966 + MPMX26_03026 0.77 +0.2
3,145,973 + MPMX26_03026 0.77 +0.6
3,145,973 + MPMX26_03026 0.77 +1.2
3,145,981 - MPMX26_03026 0.78 +1.0
3,145,987 + MPMX26_03026 0.78 -0.1
3,146,068 + MPMX26_03026 0.86 -0.1
3,146,068 + MPMX26_03026 0.86 +0.4
3,146,068 + MPMX26_03026 0.86 -0.0
3,146,094 + MPMX26_03026 0.88 +0.8
3,146,118 + +0.1
3,146,146 + +0.2
3,146,146 + -0.0
3,146,146 + +0.0
3,146,146 + +0.5
3,146,151 + -0.8
3,146,617 + MPMX26_03027 0.29 +1.0
3,146,888 + MPMX26_03027 0.79 +0.8
3,147,085 - -0.1
3,147,088 - -0.1
3,147,089 - -0.1

Or see this region's nucleotide sequence