Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02792

Experiment: UV exposure at 150J/m2 for 10 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02790 and MPMX26_02791 are separated by 0 nucleotidesMPMX26_02791 and MPMX26_02792 overlap by 4 nucleotidesMPMX26_02792 and MPMX26_02793 are separated by 152 nucleotides MPMX26_02790: MPMX26_02790 - hypothetical protein, at 2,874,765 to 2,875,814 _02790 MPMX26_02791: MPMX26_02791 - hypothetical protein, at 2,875,815 to 2,876,387 _02791 MPMX26_02792: MPMX26_02792 - hypothetical protein, at 2,876,384 to 2,876,815 _02792 MPMX26_02793: MPMX26_02793 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, at 2,876,968 to 2,877,918 _02793 Position (kb) 2876 2877Strain fitness (log2 ratio) -1 0 1 2at 2875.405 kb on - strand, within MPMX26_02790at 2875.405 kb on - strand, within MPMX26_02790at 2875.417 kb on - strand, within MPMX26_02790at 2875.417 kb on - strand, within MPMX26_02790at 2875.428 kb on - strand, within MPMX26_02790at 2875.428 kb on - strand, within MPMX26_02790at 2875.428 kb on - strand, within MPMX26_02790at 2875.428 kb on - strand, within MPMX26_02790at 2875.433 kb on - strand, within MPMX26_02790at 2875.433 kb on - strand, within MPMX26_02790at 2875.438 kb on - strand, within MPMX26_02790at 2875.438 kb on - strand, within MPMX26_02790at 2875.438 kb on - strand, within MPMX26_02790at 2875.438 kb on - strand, within MPMX26_02790at 2875.438 kb on - strand, within MPMX26_02790at 2875.438 kb on - strand, within MPMX26_02790at 2875.460 kb on - strand, within MPMX26_02790at 2875.481 kb on - strand, within MPMX26_02790at 2875.481 kb on - strand, within MPMX26_02790at 2875.481 kb on - strand, within MPMX26_02790at 2875.488 kb on - strand, within MPMX26_02790at 2875.488 kb on - strand, within MPMX26_02790at 2875.488 kb on - strand, within MPMX26_02790at 2875.488 kb on - strand, within MPMX26_02790at 2875.488 kb on - strand, within MPMX26_02790at 2875.488 kb on - strand, within MPMX26_02790at 2875.488 kb on - strand, within MPMX26_02790at 2875.488 kb on - strand, within MPMX26_02790at 2875.488 kb on - strand, within MPMX26_02790at 2875.506 kb on - strand, within MPMX26_02790at 2875.538 kb on - strand, within MPMX26_02790at 2875.550 kb on - strand, within MPMX26_02790at 2875.559 kb on - strand, within MPMX26_02790at 2875.559 kb on - strand, within MPMX26_02790at 2875.559 kb on - strand, within MPMX26_02790at 2875.559 kb on - strand, within MPMX26_02790at 2875.601 kb on - strand, within MPMX26_02790at 2875.789 kb on - strandat 2875.839 kb on - strandat 2875.839 kb on - strandat 2875.890 kb on - strand, within MPMX26_02791at 2875.890 kb on - strand, within MPMX26_02791at 2875.895 kb on - strand, within MPMX26_02791at 2876.041 kb on - strand, within MPMX26_02791at 2876.041 kb on - strand, within MPMX26_02791at 2876.041 kb on - strand, within MPMX26_02791at 2876.041 kb on - strand, within MPMX26_02791at 2876.041 kb on - strand, within MPMX26_02791at 2876.041 kb on - strand, within MPMX26_02791at 2876.044 kb on - strand, within MPMX26_02791at 2876.046 kb on - strand, within MPMX26_02791at 2876.083 kb on + strand, within MPMX26_02791at 2876.091 kb on - strand, within MPMX26_02791at 2876.091 kb on - strand, within MPMX26_02791at 2876.091 kb on - strand, within MPMX26_02791at 2876.156 kb on - strand, within MPMX26_02791at 2876.166 kb on - strand, within MPMX26_02791at 2876.173 kb on + strand, within MPMX26_02791at 2876.187 kb on - strand, within MPMX26_02791at 2876.187 kb on - strand, within MPMX26_02791at 2876.197 kb on - strand, within MPMX26_02791at 2876.272 kb on - strand, within MPMX26_02791at 2876.277 kb on - strand, within MPMX26_02791at 2876.279 kb on - strand, within MPMX26_02791at 2876.289 kb on - strand, within MPMX26_02791at 2876.289 kb on - strand, within MPMX26_02791at 2876.312 kb on - strand, within MPMX26_02791at 2876.312 kb on - strand, within MPMX26_02791at 2876.320 kb on - strand, within MPMX26_02791at 2876.320 kb on - strand, within MPMX26_02791at 2876.344 kb on - strandat 2876.345 kb on - strandat 2876.362 kb on - strandat 2876.362 kb on - strandat 2876.405 kb on - strandat 2876.426 kb on - strandat 2876.426 kb on - strandat 2876.471 kb on - strand, within MPMX26_02792at 2876.471 kb on - strand, within MPMX26_02792at 2876.473 kb on - strand, within MPMX26_02792at 2876.473 kb on - strand, within MPMX26_02792at 2876.516 kb on - strand, within MPMX26_02792at 2876.561 kb on - strand, within MPMX26_02792at 2876.563 kb on - strand, within MPMX26_02792at 2876.563 kb on - strand, within MPMX26_02792at 2876.600 kb on - strand, within MPMX26_02792at 2876.600 kb on - strand, within MPMX26_02792at 2876.627 kb on - strand, within MPMX26_02792at 2876.630 kb on - strand, within MPMX26_02792at 2876.772 kb on - strandat 2876.789 kb on - strandat 2876.799 kb on - strandat 2876.799 kb on - strandat 2876.885 kb on - strandat 2876.974 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 10 seconds
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2,875,405 - MPMX26_02790 0.61 +0.6
2,875,405 - MPMX26_02790 0.61 +1.5
2,875,417 - MPMX26_02790 0.62 +0.5
2,875,417 - MPMX26_02790 0.62 +1.1
2,875,428 - MPMX26_02790 0.63 +0.6
2,875,428 - MPMX26_02790 0.63 +0.6
2,875,428 - MPMX26_02790 0.63 +0.5
2,875,428 - MPMX26_02790 0.63 +0.3
2,875,433 - MPMX26_02790 0.64 +0.9
2,875,433 - MPMX26_02790 0.64 +0.3
2,875,438 - MPMX26_02790 0.64 -0.2
2,875,438 - MPMX26_02790 0.64 +0.7
2,875,438 - MPMX26_02790 0.64 -0.3
2,875,438 - MPMX26_02790 0.64 +1.2
2,875,438 - MPMX26_02790 0.64 -0.3
2,875,438 - MPMX26_02790 0.64 +0.5
2,875,460 - MPMX26_02790 0.66 +0.6
2,875,481 - MPMX26_02790 0.68 +0.5
2,875,481 - MPMX26_02790 0.68 -0.3
2,875,481 - MPMX26_02790 0.68 -0.2
2,875,488 - MPMX26_02790 0.69 +0.6
2,875,488 - MPMX26_02790 0.69 +0.5
2,875,488 - MPMX26_02790 0.69 +1.2
2,875,488 - MPMX26_02790 0.69 -1.2
2,875,488 - MPMX26_02790 0.69 +0.3
2,875,488 - MPMX26_02790 0.69 +0.2
2,875,488 - MPMX26_02790 0.69 +0.6
2,875,488 - MPMX26_02790 0.69 -0.2
2,875,488 - MPMX26_02790 0.69 -0.5
2,875,506 - MPMX26_02790 0.71 +0.2
2,875,538 - MPMX26_02790 0.74 +1.0
2,875,550 - MPMX26_02790 0.75 +0.8
2,875,559 - MPMX26_02790 0.76 -0.1
2,875,559 - MPMX26_02790 0.76 +0.9
2,875,559 - MPMX26_02790 0.76 -0.1
2,875,559 - MPMX26_02790 0.76 -0.3
2,875,601 - MPMX26_02790 0.80 -0.4
2,875,789 - +1.0
2,875,839 - +0.0
2,875,839 - +0.5
2,875,890 - MPMX26_02791 0.13 +0.2
2,875,890 - MPMX26_02791 0.13 +0.1
2,875,895 - MPMX26_02791 0.14 -0.2
2,876,041 - MPMX26_02791 0.39 +0.7
2,876,041 - MPMX26_02791 0.39 -0.0
2,876,041 - MPMX26_02791 0.39 +1.1
2,876,041 - MPMX26_02791 0.39 +1.3
2,876,041 - MPMX26_02791 0.39 +1.1
2,876,041 - MPMX26_02791 0.39 -0.1
2,876,044 - MPMX26_02791 0.40 -0.4
2,876,046 - MPMX26_02791 0.40 +0.1
2,876,083 + MPMX26_02791 0.47 +1.2
2,876,091 - MPMX26_02791 0.48 +0.1
2,876,091 - MPMX26_02791 0.48 +0.6
2,876,091 - MPMX26_02791 0.48 +0.0
2,876,156 - MPMX26_02791 0.60 -0.2
2,876,166 - MPMX26_02791 0.61 +0.1
2,876,173 + MPMX26_02791 0.62 +0.6
2,876,187 - MPMX26_02791 0.65 +0.2
2,876,187 - MPMX26_02791 0.65 +0.3
2,876,197 - MPMX26_02791 0.67 -0.4
2,876,272 - MPMX26_02791 0.80 -0.1
2,876,277 - MPMX26_02791 0.81 +0.3
2,876,279 - MPMX26_02791 0.81 -0.1
2,876,289 - MPMX26_02791 0.83 +0.2
2,876,289 - MPMX26_02791 0.83 -0.2
2,876,312 - MPMX26_02791 0.87 -0.1
2,876,312 - MPMX26_02791 0.87 +1.6
2,876,320 - MPMX26_02791 0.88 +1.7
2,876,320 - MPMX26_02791 0.88 +0.1
2,876,344 - -0.8
2,876,345 - +0.0
2,876,362 - +0.4
2,876,362 - -0.0
2,876,405 - +0.5
2,876,426 - +0.3
2,876,426 - +0.0
2,876,471 - MPMX26_02792 0.20 +0.1
2,876,471 - MPMX26_02792 0.20 +1.0
2,876,473 - MPMX26_02792 0.21 +0.4
2,876,473 - MPMX26_02792 0.21 +1.2
2,876,516 - MPMX26_02792 0.31 +0.5
2,876,561 - MPMX26_02792 0.41 +1.0
2,876,563 - MPMX26_02792 0.41 +0.5
2,876,563 - MPMX26_02792 0.41 +1.8
2,876,600 - MPMX26_02792 0.50 +0.4
2,876,600 - MPMX26_02792 0.50 +0.5
2,876,627 - MPMX26_02792 0.56 +1.5
2,876,630 - MPMX26_02792 0.57 +0.2
2,876,772 - -1.3
2,876,789 - +0.6
2,876,799 - -0.4
2,876,799 - +0.4
2,876,885 - -1.0
2,876,974 - -0.7

Or see this region's nucleotide sequence