Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02658

Experiment: UV exposure at 150J/m2 for 10 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02657 and MPMX26_02658 are separated by 442 nucleotidesMPMX26_02658 and MPMX26_02659 are separated by 19 nucleotidesMPMX26_02659 and MPMX26_02660 are separated by 49 nucleotides MPMX26_02657: MPMX26_02657 - 16S ribosomal RNA, at 2,752,960 to 2,754,492 _02657 MPMX26_02658: MPMX26_02658 - hypothetical protein, at 2,754,935 to 2,756,008 _02658 MPMX26_02659: MPMX26_02659 - hypothetical protein, at 2,756,028 to 2,756,858 _02659 MPMX26_02660: MPMX26_02660 - Ribosomal RNA large subunit methyltransferase J, at 2,756,908 to 2,757,765 _02660 Position (kb) 2754 2755 2756 2757Strain fitness (log2 ratio) -2 -1 0 1 2at 2755.025 kb on - strandat 2755.046 kb on - strand, within MPMX26_02658at 2755.054 kb on - strand, within MPMX26_02658at 2755.078 kb on - strand, within MPMX26_02658at 2755.100 kb on + strand, within MPMX26_02658at 2755.102 kb on - strand, within MPMX26_02658at 2755.108 kb on - strand, within MPMX26_02658at 2755.140 kb on - strand, within MPMX26_02658at 2755.198 kb on - strand, within MPMX26_02658at 2755.211 kb on - strand, within MPMX26_02658at 2755.216 kb on - strand, within MPMX26_02658at 2755.216 kb on - strand, within MPMX26_02658at 2755.265 kb on - strand, within MPMX26_02658at 2755.325 kb on - strand, within MPMX26_02658at 2755.514 kb on - strand, within MPMX26_02658at 2755.829 kb on - strand, within MPMX26_02658at 2755.894 kb on - strand, within MPMX26_02658at 2755.943 kb on - strandat 2755.997 kb on - strandat 2756.015 kb on - strandat 2756.015 kb on - strandat 2756.029 kb on - strandat 2756.881 kb on - strandat 2756.929 kb on - strandat 2756.929 kb on - strandat 2756.967 kb on - strandat 2756.985 kb on - strandat 2756.985 kb on - strandat 2756.985 kb on - strandat 2756.985 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 10 seconds
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2,755,025 - -0.2
2,755,046 - MPMX26_02658 0.10 -0.9
2,755,054 - MPMX26_02658 0.11 -0.6
2,755,078 - MPMX26_02658 0.13 -2.3
2,755,100 + MPMX26_02658 0.15 +0.9
2,755,102 - MPMX26_02658 0.16 +0.7
2,755,108 - MPMX26_02658 0.16 +0.2
2,755,140 - MPMX26_02658 0.19 -0.9
2,755,198 - MPMX26_02658 0.24 -0.6
2,755,211 - MPMX26_02658 0.26 -0.8
2,755,216 - MPMX26_02658 0.26 -0.7
2,755,216 - MPMX26_02658 0.26 -0.1
2,755,265 - MPMX26_02658 0.31 +1.8
2,755,325 - MPMX26_02658 0.36 +0.4
2,755,514 - MPMX26_02658 0.54 +0.1
2,755,829 - MPMX26_02658 0.83 -0.7
2,755,894 - MPMX26_02658 0.89 +0.4
2,755,943 - -0.3
2,755,997 - +0.1
2,756,015 - -0.4
2,756,015 - -0.3
2,756,029 - +0.0
2,756,881 - -0.0
2,756,929 - -0.3
2,756,929 - -0.3
2,756,967 - +0.2
2,756,985 - -0.0
2,756,985 - -0.3
2,756,985 - -0.2
2,756,985 - -0.1

Or see this region's nucleotide sequence