Experiment: UV exposure at 150J/m2 for 10 seconds
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02657 and MPMX26_02658 are separated by 442 nucleotides MPMX26_02658 and MPMX26_02659 are separated by 19 nucleotides MPMX26_02659 and MPMX26_02660 are separated by 49 nucleotides
MPMX26_02657: MPMX26_02657 - 16S ribosomal RNA, at 2,752,960 to 2,754,492
_02657
MPMX26_02658: MPMX26_02658 - hypothetical protein, at 2,754,935 to 2,756,008
_02658
MPMX26_02659: MPMX26_02659 - hypothetical protein, at 2,756,028 to 2,756,858
_02659
MPMX26_02660: MPMX26_02660 - Ribosomal RNA large subunit methyltransferase J, at 2,756,908 to 2,757,765
_02660
Position (kb)
2754
2755
2756
2757 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2755.025 kb on - strand at 2755.046 kb on - strand, within MPMX26_02658 at 2755.054 kb on - strand, within MPMX26_02658 at 2755.078 kb on - strand, within MPMX26_02658 at 2755.100 kb on + strand, within MPMX26_02658 at 2755.102 kb on - strand, within MPMX26_02658 at 2755.108 kb on - strand, within MPMX26_02658 at 2755.140 kb on - strand, within MPMX26_02658 at 2755.198 kb on - strand, within MPMX26_02658 at 2755.211 kb on - strand, within MPMX26_02658 at 2755.216 kb on - strand, within MPMX26_02658 at 2755.216 kb on - strand, within MPMX26_02658 at 2755.265 kb on - strand, within MPMX26_02658 at 2755.325 kb on - strand, within MPMX26_02658 at 2755.514 kb on - strand, within MPMX26_02658 at 2755.829 kb on - strand, within MPMX26_02658 at 2755.894 kb on - strand, within MPMX26_02658 at 2755.943 kb on - strand at 2755.997 kb on - strand at 2756.015 kb on - strand at 2756.015 kb on - strand at 2756.029 kb on - strand at 2756.881 kb on - strand at 2756.929 kb on - strand at 2756.929 kb on - strand at 2756.967 kb on - strand at 2756.985 kb on - strand at 2756.985 kb on - strand at 2756.985 kb on - strand at 2756.985 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 10 seconds remove 2,755,025 - -0.2 2,755,046 - MPMX26_02658 0.10 -0.9 2,755,054 - MPMX26_02658 0.11 -0.6 2,755,078 - MPMX26_02658 0.13 -2.3 2,755,100 + MPMX26_02658 0.15 +0.9 2,755,102 - MPMX26_02658 0.16 +0.7 2,755,108 - MPMX26_02658 0.16 +0.2 2,755,140 - MPMX26_02658 0.19 -0.9 2,755,198 - MPMX26_02658 0.24 -0.6 2,755,211 - MPMX26_02658 0.26 -0.8 2,755,216 - MPMX26_02658 0.26 -0.7 2,755,216 - MPMX26_02658 0.26 -0.1 2,755,265 - MPMX26_02658 0.31 +1.8 2,755,325 - MPMX26_02658 0.36 +0.4 2,755,514 - MPMX26_02658 0.54 +0.1 2,755,829 - MPMX26_02658 0.83 -0.7 2,755,894 - MPMX26_02658 0.89 +0.4 2,755,943 - -0.3 2,755,997 - +0.1 2,756,015 - -0.4 2,756,015 - -0.3 2,756,029 - +0.0 2,756,881 - -0.0 2,756,929 - -0.3 2,756,929 - -0.3 2,756,967 - +0.2 2,756,985 - -0.0 2,756,985 - -0.3 2,756,985 - -0.2 2,756,985 - -0.1
Or see this region's nucleotide sequence