Experiment: UV exposure at 150J/m2 for 10 seconds
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02481 and MPMX26_02482 are separated by 260 nucleotides MPMX26_02482 and MPMX26_02483 are separated by 428 nucleotides
MPMX26_02481: MPMX26_02481 - 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming), at 2,565,667 to 2,568,273
_02481
MPMX26_02482: MPMX26_02482 - tRNA-modifying protein YgfZ, at 2,568,534 to 2,569,253
_02482
MPMX26_02483: MPMX26_02483 - hypothetical protein, at 2,569,682 to 2,570,470
_02483
Position (kb)
2568
2569
2570 Strain fitness (log2 ratio)
-2
-1
0
1 at 2567.665 kb on - strand, within MPMX26_02481 at 2567.719 kb on - strand, within MPMX26_02481 at 2567.724 kb on - strand, within MPMX26_02481 at 2567.752 kb on - strand, within MPMX26_02481 at 2567.752 kb on - strand, within MPMX26_02481 at 2567.856 kb on - strand, within MPMX26_02481 at 2567.856 kb on - strand, within MPMX26_02481 at 2567.856 kb on - strand, within MPMX26_02481 at 2567.971 kb on - strand, within MPMX26_02481 at 2567.971 kb on - strand, within MPMX26_02481 at 2568.015 kb on - strand at 2568.015 kb on - strand at 2568.015 kb on - strand at 2568.082 kb on - strand at 2568.082 kb on - strand at 2568.082 kb on - strand at 2568.172 kb on - strand at 2568.217 kb on - strand at 2568.217 kb on - strand at 2568.227 kb on - strand at 2568.350 kb on - strand at 2568.518 kb on + strand at 2569.223 kb on + strand at 2569.248 kb on + strand at 2569.717 kb on + strand at 2569.814 kb on + strand, within MPMX26_02483 at 2569.814 kb on + strand, within MPMX26_02483 at 2569.861 kb on + strand, within MPMX26_02483 at 2569.861 kb on + strand, within MPMX26_02483 at 2569.861 kb on + strand, within MPMX26_02483 at 2569.861 kb on + strand, within MPMX26_02483 at 2569.920 kb on + strand, within MPMX26_02483 at 2569.946 kb on + strand, within MPMX26_02483 at 2569.951 kb on + strand, within MPMX26_02483 at 2569.953 kb on + strand, within MPMX26_02483 at 2569.968 kb on + strand, within MPMX26_02483 at 2569.979 kb on + strand, within MPMX26_02483 at 2569.995 kb on + strand, within MPMX26_02483 at 2570.000 kb on + strand, within MPMX26_02483 at 2570.000 kb on + strand, within MPMX26_02483 at 2570.011 kb on + strand, within MPMX26_02483 at 2570.011 kb on + strand, within MPMX26_02483 at 2570.011 kb on + strand, within MPMX26_02483 at 2570.011 kb on + strand, within MPMX26_02483 at 2570.011 kb on + strand, within MPMX26_02483 at 2570.011 kb on + strand, within MPMX26_02483 at 2570.018 kb on + strand, within MPMX26_02483 at 2570.030 kb on + strand, within MPMX26_02483 at 2570.076 kb on + strand, within MPMX26_02483 at 2570.086 kb on + strand, within MPMX26_02483 at 2570.120 kb on + strand, within MPMX26_02483 at 2570.190 kb on + strand, within MPMX26_02483 at 2570.198 kb on + strand, within MPMX26_02483 at 2570.198 kb on + strand, within MPMX26_02483
Per-strain Table
Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 10 seconds remove 2,567,665 - MPMX26_02481 0.77 +0.6 2,567,719 - MPMX26_02481 0.79 +1.5 2,567,724 - MPMX26_02481 0.79 -0.6 2,567,752 - MPMX26_02481 0.80 -1.3 2,567,752 - MPMX26_02481 0.80 -0.3 2,567,856 - MPMX26_02481 0.84 -0.3 2,567,856 - MPMX26_02481 0.84 -1.0 2,567,856 - MPMX26_02481 0.84 +0.5 2,567,971 - MPMX26_02481 0.88 -1.4 2,567,971 - MPMX26_02481 0.88 -0.1 2,568,015 - -1.3 2,568,015 - -1.2 2,568,015 - -0.1 2,568,082 - -0.3 2,568,082 - -0.7 2,568,082 - -0.3 2,568,172 - -1.0 2,568,217 - -1.1 2,568,217 - -0.5 2,568,227 - +0.1 2,568,350 - +0.0 2,568,518 + -1.0 2,569,223 + -0.3 2,569,248 + -2.1 2,569,717 + +0.0 2,569,814 + MPMX26_02483 0.17 +0.1 2,569,814 + MPMX26_02483 0.17 +0.9 2,569,861 + MPMX26_02483 0.23 -0.1 2,569,861 + MPMX26_02483 0.23 -0.3 2,569,861 + MPMX26_02483 0.23 +0.1 2,569,861 + MPMX26_02483 0.23 -0.1 2,569,920 + MPMX26_02483 0.30 +1.0 2,569,946 + MPMX26_02483 0.33 +0.3 2,569,951 + MPMX26_02483 0.34 -0.6 2,569,953 + MPMX26_02483 0.34 -1.0 2,569,968 + MPMX26_02483 0.36 -0.5 2,569,979 + MPMX26_02483 0.38 +0.4 2,569,995 + MPMX26_02483 0.40 +0.0 2,570,000 + MPMX26_02483 0.40 +0.1 2,570,000 + MPMX26_02483 0.40 +0.0 2,570,011 + MPMX26_02483 0.42 +0.3 2,570,011 + MPMX26_02483 0.42 -0.2 2,570,011 + MPMX26_02483 0.42 +0.2 2,570,011 + MPMX26_02483 0.42 -0.0 2,570,011 + MPMX26_02483 0.42 -0.2 2,570,011 + MPMX26_02483 0.42 -0.3 2,570,018 + MPMX26_02483 0.43 +0.6 2,570,030 + MPMX26_02483 0.44 -0.6 2,570,076 + MPMX26_02483 0.50 +1.0 2,570,086 + MPMX26_02483 0.51 +0.4 2,570,120 + MPMX26_02483 0.56 +0.3 2,570,190 + MPMX26_02483 0.64 -1.0 2,570,198 + MPMX26_02483 0.65 +0.3 2,570,198 + MPMX26_02483 0.65 +0.1
Or see this region's nucleotide sequence