Experiment: UV exposure at 150J/m2 for 10 seconds
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02407 and MPMX26_02408 are separated by 111 nucleotides MPMX26_02408 and MPMX26_02409 are separated by 45 nucleotides MPMX26_02409 and MPMX26_02410 overlap by 1 nucleotides
MPMX26_02407: MPMX26_02407 - Ferric uptake regulation protein, at 2,493,031 to 2,493,468
_02407
MPMX26_02408: MPMX26_02408 - Outer membrane protein assembly factor BamE, at 2,493,580 to 2,493,978
_02408
MPMX26_02409: MPMX26_02409 - hypothetical protein, at 2,494,024 to 2,494,347
_02409
MPMX26_02410: MPMX26_02410 - hypothetical protein, at 2,494,347 to 2,495,429
_02410
Position (kb)
2494
2495 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2493.434 kb on - strand at 2493.616 kb on - strand at 2493.616 kb on - strand at 2493.629 kb on + strand, within MPMX26_02408 at 2493.629 kb on + strand, within MPMX26_02408 at 2493.629 kb on + strand, within MPMX26_02408 at 2493.629 kb on + strand, within MPMX26_02408 at 2493.629 kb on + strand, within MPMX26_02408 at 2493.629 kb on + strand, within MPMX26_02408 at 2493.629 kb on + strand, within MPMX26_02408 at 2493.637 kb on - strand, within MPMX26_02408 at 2493.660 kb on + strand, within MPMX26_02408 at 2493.660 kb on + strand, within MPMX26_02408 at 2493.708 kb on + strand, within MPMX26_02408 at 2493.713 kb on + strand, within MPMX26_02408 at 2493.772 kb on + strand, within MPMX26_02408 at 2493.789 kb on + strand, within MPMX26_02408 at 2493.831 kb on + strand, within MPMX26_02408 at 2493.831 kb on + strand, within MPMX26_02408 at 2493.903 kb on + strand, within MPMX26_02408 at 2493.903 kb on + strand, within MPMX26_02408 at 2493.903 kb on + strand, within MPMX26_02408 at 2493.921 kb on + strand, within MPMX26_02408 at 2493.940 kb on + strand at 2493.968 kb on + strand at 2494.068 kb on - strand, within MPMX26_02409 at 2494.123 kb on - strand, within MPMX26_02409 at 2494.165 kb on - strand, within MPMX26_02409 at 2494.165 kb on - strand, within MPMX26_02409 at 2494.170 kb on - strand, within MPMX26_02409 at 2494.206 kb on - strand, within MPMX26_02409 at 2494.206 kb on - strand, within MPMX26_02409 at 2494.206 kb on - strand, within MPMX26_02409 at 2494.206 kb on - strand, within MPMX26_02409 at 2494.270 kb on - strand, within MPMX26_02409 at 2494.309 kb on - strand, within MPMX26_02409 at 2494.315 kb on - strand at 2494.335 kb on - strand at 2494.364 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 10 seconds remove 2,493,434 - +2.1 2,493,616 - -0.4 2,493,616 - +1.3 2,493,629 + MPMX26_02408 0.12 +0.4 2,493,629 + MPMX26_02408 0.12 +0.8 2,493,629 + MPMX26_02408 0.12 +0.1 2,493,629 + MPMX26_02408 0.12 -0.5 2,493,629 + MPMX26_02408 0.12 -1.7 2,493,629 + MPMX26_02408 0.12 -0.7 2,493,629 + MPMX26_02408 0.12 -0.3 2,493,637 - MPMX26_02408 0.14 +0.5 2,493,660 + MPMX26_02408 0.20 -0.2 2,493,660 + MPMX26_02408 0.20 -0.1 2,493,708 + MPMX26_02408 0.32 +0.2 2,493,713 + MPMX26_02408 0.33 -0.3 2,493,772 + MPMX26_02408 0.48 -0.9 2,493,789 + MPMX26_02408 0.52 -1.4 2,493,831 + MPMX26_02408 0.63 +0.1 2,493,831 + MPMX26_02408 0.63 -0.6 2,493,903 + MPMX26_02408 0.81 -0.2 2,493,903 + MPMX26_02408 0.81 -0.3 2,493,903 + MPMX26_02408 0.81 +0.0 2,493,921 + MPMX26_02408 0.85 -0.1 2,493,940 + +0.1 2,493,968 + -0.4 2,494,068 - MPMX26_02409 0.14 +0.3 2,494,123 - MPMX26_02409 0.31 +0.6 2,494,165 - MPMX26_02409 0.44 -0.7 2,494,165 - MPMX26_02409 0.44 +0.5 2,494,170 - MPMX26_02409 0.45 -1.7 2,494,206 - MPMX26_02409 0.56 -0.0 2,494,206 - MPMX26_02409 0.56 +1.1 2,494,206 - MPMX26_02409 0.56 +0.5 2,494,206 - MPMX26_02409 0.56 +0.6 2,494,270 - MPMX26_02409 0.76 +1.0 2,494,309 - MPMX26_02409 0.88 +1.5 2,494,315 - -0.5 2,494,335 - +0.1 2,494,364 - -2.0
Or see this region's nucleotide sequence