Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00481

Experiment: UV exposure at 150J/m2 for 10 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00480 and MPMX26_00481 are separated by 129 nucleotidesMPMX26_00481 and MPMX26_00482 are separated by 65 nucleotides MPMX26_00480: MPMX26_00480 - Aconitate hydratase A, at 520,147 to 522,903 _00480 MPMX26_00481: MPMX26_00481 - tRNA threonylcarbamoyladenosine dehydratase, at 523,033 to 523,803 _00481 MPMX26_00482: MPMX26_00482 - tRNA-dihydrouridine(20/20a) synthase, at 523,869 to 524,891 _00482 Position (kb) 523 524Strain fitness (log2 ratio) -2 -1 0 1at 523.029 kb on + strandat 523.034 kb on + strandat 523.053 kb on + strandat 523.057 kb on + strandat 523.057 kb on + strandat 523.071 kb on + strandat 523.115 kb on + strand, within MPMX26_00481at 523.125 kb on + strand, within MPMX26_00481at 523.154 kb on + strand, within MPMX26_00481at 523.154 kb on + strand, within MPMX26_00481at 523.171 kb on + strand, within MPMX26_00481at 523.177 kb on + strand, within MPMX26_00481at 523.177 kb on + strand, within MPMX26_00481at 523.192 kb on + strand, within MPMX26_00481at 523.192 kb on + strand, within MPMX26_00481at 523.208 kb on + strand, within MPMX26_00481at 523.254 kb on + strand, within MPMX26_00481at 523.261 kb on + strand, within MPMX26_00481at 523.268 kb on + strand, within MPMX26_00481at 523.273 kb on + strand, within MPMX26_00481at 523.274 kb on + strand, within MPMX26_00481at 523.348 kb on + strand, within MPMX26_00481at 523.373 kb on + strand, within MPMX26_00481at 523.408 kb on + strand, within MPMX26_00481at 523.408 kb on + strand, within MPMX26_00481at 523.408 kb on + strand, within MPMX26_00481at 523.413 kb on + strand, within MPMX26_00481at 523.415 kb on + strand, within MPMX26_00481at 523.418 kb on + strand, within MPMX26_00481at 523.418 kb on + strand, within MPMX26_00481at 523.418 kb on + strand, within MPMX26_00481at 523.418 kb on + strand, within MPMX26_00481at 523.418 kb on + strand, within MPMX26_00481at 523.418 kb on + strand, within MPMX26_00481at 523.418 kb on + strand, within MPMX26_00481at 523.418 kb on + strand, within MPMX26_00481at 523.418 kb on + strand, within MPMX26_00481at 523.418 kb on + strand, within MPMX26_00481at 523.418 kb on + strand, within MPMX26_00481at 523.426 kb on - strand, within MPMX26_00481at 523.433 kb on + strand, within MPMX26_00481at 523.508 kb on + strand, within MPMX26_00481at 523.508 kb on + strand, within MPMX26_00481at 523.508 kb on + strand, within MPMX26_00481at 523.508 kb on + strand, within MPMX26_00481at 523.508 kb on + strand, within MPMX26_00481at 523.519 kb on + strand, within MPMX26_00481at 523.531 kb on + strand, within MPMX26_00481at 523.559 kb on + strand, within MPMX26_00481at 523.559 kb on + strand, within MPMX26_00481at 523.569 kb on + strand, within MPMX26_00481at 523.585 kb on + strand, within MPMX26_00481at 523.678 kb on + strand, within MPMX26_00481at 523.688 kb on + strand, within MPMX26_00481at 523.688 kb on + strand, within MPMX26_00481at 523.688 kb on + strand, within MPMX26_00481at 523.688 kb on + strand, within MPMX26_00481at 523.688 kb on + strand, within MPMX26_00481at 523.688 kb on + strand, within MPMX26_00481at 523.688 kb on + strand, within MPMX26_00481at 523.693 kb on + strand, within MPMX26_00481at 523.693 kb on + strand, within MPMX26_00481at 523.693 kb on + strand, within MPMX26_00481at 523.693 kb on + strand, within MPMX26_00481at 523.698 kb on + strand, within MPMX26_00481at 523.698 kb on + strand, within MPMX26_00481at 523.698 kb on + strand, within MPMX26_00481at 523.703 kb on + strand, within MPMX26_00481at 523.703 kb on + strand, within MPMX26_00481at 523.705 kb on + strand, within MPMX26_00481at 523.708 kb on + strand, within MPMX26_00481at 523.708 kb on + strand, within MPMX26_00481at 523.708 kb on + strand, within MPMX26_00481at 523.715 kb on + strand, within MPMX26_00481at 523.715 kb on + strand, within MPMX26_00481at 523.718 kb on + strand, within MPMX26_00481at 523.720 kb on + strand, within MPMX26_00481at 523.733 kb on + strandat 523.733 kb on + strandat 523.739 kb on + strandat 523.916 kb on - strandat 523.916 kb on - strandat 523.983 kb on - strand, within MPMX26_00482at 523.983 kb on - strand, within MPMX26_00482at 523.989 kb on - strand, within MPMX26_00482at 524.051 kb on + strand, within MPMX26_00482at 524.057 kb on - strand, within MPMX26_00482at 524.059 kb on - strand, within MPMX26_00482at 524.059 kb on - strand, within MPMX26_00482at 524.059 kb on - strand, within MPMX26_00482at 524.059 kb on - strand, within MPMX26_00482at 524.061 kb on - strand, within MPMX26_00482at 524.071 kb on - strand, within MPMX26_00482at 524.078 kb on - strand, within MPMX26_00482at 524.094 kb on - strand, within MPMX26_00482at 524.094 kb on - strand, within MPMX26_00482at 524.104 kb on - strand, within MPMX26_00482at 524.139 kb on - strand, within MPMX26_00482at 524.139 kb on - strand, within MPMX26_00482at 524.149 kb on - strand, within MPMX26_00482at 524.167 kb on - strand, within MPMX26_00482at 524.172 kb on - strand, within MPMX26_00482at 524.172 kb on - strand, within MPMX26_00482at 524.172 kb on - strand, within MPMX26_00482at 524.172 kb on - strand, within MPMX26_00482at 524.195 kb on - strand, within MPMX26_00482at 524.207 kb on - strand, within MPMX26_00482at 524.222 kb on - strand, within MPMX26_00482at 524.275 kb on - strand, within MPMX26_00482at 524.275 kb on - strand, within MPMX26_00482at 524.275 kb on - strand, within MPMX26_00482at 524.276 kb on - strand, within MPMX26_00482at 524.290 kb on - strand, within MPMX26_00482at 524.290 kb on - strand, within MPMX26_00482at 524.290 kb on - strand, within MPMX26_00482at 524.315 kb on - strand, within MPMX26_00482at 524.365 kb on - strand, within MPMX26_00482at 524.365 kb on - strand, within MPMX26_00482at 524.365 kb on - strand, within MPMX26_00482at 524.375 kb on - strand, within MPMX26_00482at 524.375 kb on - strand, within MPMX26_00482at 524.383 kb on - strand, within MPMX26_00482at 524.444 kb on - strand, within MPMX26_00482at 524.473 kb on - strand, within MPMX26_00482at 524.473 kb on - strand, within MPMX26_00482at 524.473 kb on - strand, within MPMX26_00482at 524.499 kb on - strand, within MPMX26_00482at 524.598 kb on - strand, within MPMX26_00482at 524.622 kb on - strand, within MPMX26_00482at 524.627 kb on - strand, within MPMX26_00482at 524.627 kb on - strand, within MPMX26_00482at 524.627 kb on - strand, within MPMX26_00482at 524.638 kb on - strand, within MPMX26_00482at 524.641 kb on - strand, within MPMX26_00482at 524.641 kb on - strand, within MPMX26_00482at 524.641 kb on - strand, within MPMX26_00482at 524.641 kb on - strand, within MPMX26_00482at 524.723 kb on - strand, within MPMX26_00482at 524.754 kb on - strand, within MPMX26_00482at 524.782 kb on - strand, within MPMX26_00482

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 10 seconds
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523,029 + +0.1
523,034 + +0.8
523,053 + -0.4
523,057 + +0.2
523,057 + +0.2
523,071 + +0.6
523,115 + MPMX26_00481 0.11 +1.2
523,125 + MPMX26_00481 0.12 -0.2
523,154 + MPMX26_00481 0.16 +0.2
523,154 + MPMX26_00481 0.16 +0.1
523,171 + MPMX26_00481 0.18 -0.2
523,177 + MPMX26_00481 0.19 +0.2
523,177 + MPMX26_00481 0.19 -0.5
523,192 + MPMX26_00481 0.21 -1.0
523,192 + MPMX26_00481 0.21 -0.1
523,208 + MPMX26_00481 0.23 +0.5
523,254 + MPMX26_00481 0.29 -0.2
523,261 + MPMX26_00481 0.30 -0.1
523,268 + MPMX26_00481 0.30 +0.5
523,273 + MPMX26_00481 0.31 +0.2
523,274 + MPMX26_00481 0.31 -0.7
523,348 + MPMX26_00481 0.41 -0.7
523,373 + MPMX26_00481 0.44 -0.7
523,408 + MPMX26_00481 0.49 -0.8
523,408 + MPMX26_00481 0.49 -0.0
523,408 + MPMX26_00481 0.49 -0.3
523,413 + MPMX26_00481 0.49 -1.0
523,415 + MPMX26_00481 0.50 +0.1
523,418 + MPMX26_00481 0.50 +0.5
523,418 + MPMX26_00481 0.50 -0.8
523,418 + MPMX26_00481 0.50 -0.2
523,418 + MPMX26_00481 0.50 -0.5
523,418 + MPMX26_00481 0.50 -0.6
523,418 + MPMX26_00481 0.50 +0.8
523,418 + MPMX26_00481 0.50 +0.5
523,418 + MPMX26_00481 0.50 -2.2
523,418 + MPMX26_00481 0.50 +0.4
523,418 + MPMX26_00481 0.50 -0.5
523,418 + MPMX26_00481 0.50 -0.5
523,426 - MPMX26_00481 0.51 -0.2
523,433 + MPMX26_00481 0.52 -0.1
523,508 + MPMX26_00481 0.62 -0.5
523,508 + MPMX26_00481 0.62 -0.4
523,508 + MPMX26_00481 0.62 -0.9
523,508 + MPMX26_00481 0.62 +0.7
523,508 + MPMX26_00481 0.62 +0.4
523,519 + MPMX26_00481 0.63 -0.3
523,531 + MPMX26_00481 0.65 -0.1
523,559 + MPMX26_00481 0.68 +0.6
523,559 + MPMX26_00481 0.68 -1.1
523,569 + MPMX26_00481 0.70 +0.4
523,585 + MPMX26_00481 0.72 +0.0
523,678 + MPMX26_00481 0.84 -0.5
523,688 + MPMX26_00481 0.85 -1.5
523,688 + MPMX26_00481 0.85 +0.1
523,688 + MPMX26_00481 0.85 -0.2
523,688 + MPMX26_00481 0.85 -0.4
523,688 + MPMX26_00481 0.85 +0.1
523,688 + MPMX26_00481 0.85 +1.5
523,688 + MPMX26_00481 0.85 -0.1
523,693 + MPMX26_00481 0.86 -0.0
523,693 + MPMX26_00481 0.86 -1.0
523,693 + MPMX26_00481 0.86 -0.7
523,693 + MPMX26_00481 0.86 +0.2
523,698 + MPMX26_00481 0.86 -0.2
523,698 + MPMX26_00481 0.86 +0.1
523,698 + MPMX26_00481 0.86 -0.6
523,703 + MPMX26_00481 0.87 +0.5
523,703 + MPMX26_00481 0.87 +0.5
523,705 + MPMX26_00481 0.87 +0.6
523,708 + MPMX26_00481 0.88 -0.2
523,708 + MPMX26_00481 0.88 -1.1
523,708 + MPMX26_00481 0.88 -0.2
523,715 + MPMX26_00481 0.88 -0.2
523,715 + MPMX26_00481 0.88 -0.1
523,718 + MPMX26_00481 0.89 -0.3
523,720 + MPMX26_00481 0.89 +0.1
523,733 + +0.4
523,733 + +0.7
523,739 + -0.8
523,916 - -0.0
523,916 - -0.4
523,983 - MPMX26_00482 0.11 -0.5
523,983 - MPMX26_00482 0.11 -0.8
523,989 - MPMX26_00482 0.12 +0.2
524,051 + MPMX26_00482 0.18 -0.5
524,057 - MPMX26_00482 0.18 -1.5
524,059 - MPMX26_00482 0.19 +0.6
524,059 - MPMX26_00482 0.19 -0.8
524,059 - MPMX26_00482 0.19 +0.0
524,059 - MPMX26_00482 0.19 -0.2
524,061 - MPMX26_00482 0.19 -0.6
524,071 - MPMX26_00482 0.20 -0.6
524,078 - MPMX26_00482 0.20 +0.4
524,094 - MPMX26_00482 0.22 -0.7
524,094 - MPMX26_00482 0.22 +0.0
524,104 - MPMX26_00482 0.23 -0.8
524,139 - MPMX26_00482 0.26 +0.3
524,139 - MPMX26_00482 0.26 -0.2
524,149 - MPMX26_00482 0.27 -0.2
524,167 - MPMX26_00482 0.29 -0.2
524,172 - MPMX26_00482 0.30 +0.3
524,172 - MPMX26_00482 0.30 +0.3
524,172 - MPMX26_00482 0.30 +0.7
524,172 - MPMX26_00482 0.30 +0.1
524,195 - MPMX26_00482 0.32 +0.3
524,207 - MPMX26_00482 0.33 -0.3
524,222 - MPMX26_00482 0.35 -0.1
524,275 - MPMX26_00482 0.40 -0.4
524,275 - MPMX26_00482 0.40 -0.0
524,275 - MPMX26_00482 0.40 -0.7
524,276 - MPMX26_00482 0.40 +0.5
524,290 - MPMX26_00482 0.41 -1.1
524,290 - MPMX26_00482 0.41 +0.1
524,290 - MPMX26_00482 0.41 +0.1
524,315 - MPMX26_00482 0.44 -0.5
524,365 - MPMX26_00482 0.48 +0.8
524,365 - MPMX26_00482 0.48 -0.1
524,365 - MPMX26_00482 0.48 +0.2
524,375 - MPMX26_00482 0.49 +1.1
524,375 - MPMX26_00482 0.49 +0.0
524,383 - MPMX26_00482 0.50 +0.1
524,444 - MPMX26_00482 0.56 +0.1
524,473 - MPMX26_00482 0.59 +0.1
524,473 - MPMX26_00482 0.59 -0.6
524,473 - MPMX26_00482 0.59 -0.2
524,499 - MPMX26_00482 0.62 -0.2
524,598 - MPMX26_00482 0.71 -0.2
524,622 - MPMX26_00482 0.74 +0.3
524,627 - MPMX26_00482 0.74 +0.1
524,627 - MPMX26_00482 0.74 -0.4
524,627 - MPMX26_00482 0.74 -0.4
524,638 - MPMX26_00482 0.75 -1.2
524,641 - MPMX26_00482 0.75 +1.5
524,641 - MPMX26_00482 0.75 -0.8
524,641 - MPMX26_00482 0.75 -0.4
524,641 - MPMX26_00482 0.75 -0.3
524,723 - MPMX26_00482 0.83 +0.6
524,754 - MPMX26_00482 0.87 +0.9
524,782 - MPMX26_00482 0.89 -0.2

Or see this region's nucleotide sequence