Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00369

Experiment: UV exposure at 150J/m2 for 10 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00368 and MPMX26_00369 are separated by 60 nucleotidesMPMX26_00369 and MPMX26_00370 are separated by 87 nucleotidesMPMX26_00370 and MPMX26_00371 are separated by 262 nucleotides MPMX26_00368: MPMX26_00368 - Glycerate 2-kinase, at 399,772 to 400,926 _00368 MPMX26_00369: MPMX26_00369 - ATP-dependent DNA helicase PcrA, at 400,987 to 402,966 _00369 MPMX26_00370: MPMX26_00370 - hypothetical protein, at 403,054 to 403,305 _00370 MPMX26_00371: MPMX26_00371 - hypothetical protein, at 403,568 to 404,071 _00371 Position (kb) 400 401 402 403Strain fitness (log2 ratio) -2 -1 0 1 2at 400.221 kb on + strand, within MPMX26_00368at 401.040 kb on + strandat 401.050 kb on + strandat 401.055 kb on + strandat 401.065 kb on + strandat 401.065 kb on + strandat 401.133 kb on + strandat 401.133 kb on + strandat 401.133 kb on + strandat 401.133 kb on + strandat 401.133 kb on + strandat 401.133 kb on + strandat 401.133 kb on + strandat 401.133 kb on + strandat 401.133 kb on + strandat 401.133 kb on + strandat 401.133 kb on + strandat 401.133 kb on + strandat 401.133 kb on + strandat 401.133 kb on + strandat 401.133 kb on + strandat 401.133 kb on + strandat 401.133 kb on + strandat 401.133 kb on + strandat 401.133 kb on + strandat 401.158 kb on + strandat 401.196 kb on + strand, within MPMX26_00369at 401.202 kb on + strand, within MPMX26_00369at 401.206 kb on + strand, within MPMX26_00369at 401.206 kb on + strand, within MPMX26_00369at 401.206 kb on + strand, within MPMX26_00369at 401.206 kb on + strand, within MPMX26_00369at 401.206 kb on + strand, within MPMX26_00369at 401.206 kb on + strand, within MPMX26_00369at 401.214 kb on + strand, within MPMX26_00369at 401.226 kb on + strand, within MPMX26_00369at 401.300 kb on + strand, within MPMX26_00369at 401.337 kb on + strand, within MPMX26_00369at 401.368 kb on + strand, within MPMX26_00369at 401.368 kb on + strand, within MPMX26_00369at 401.368 kb on + strand, within MPMX26_00369at 401.368 kb on + strand, within MPMX26_00369at 401.380 kb on + strand, within MPMX26_00369at 401.380 kb on + strand, within MPMX26_00369at 401.380 kb on + strand, within MPMX26_00369at 401.385 kb on + strand, within MPMX26_00369at 401.385 kb on + strand, within MPMX26_00369at 401.385 kb on + strand, within MPMX26_00369at 401.445 kb on + strand, within MPMX26_00369at 401.498 kb on + strand, within MPMX26_00369at 401.508 kb on + strand, within MPMX26_00369at 401.538 kb on + strand, within MPMX26_00369at 401.605 kb on + strand, within MPMX26_00369at 401.607 kb on + strand, within MPMX26_00369at 401.635 kb on + strand, within MPMX26_00369at 401.658 kb on + strand, within MPMX26_00369at 401.660 kb on + strand, within MPMX26_00369at 401.842 kb on + strand, within MPMX26_00369at 401.842 kb on + strand, within MPMX26_00369at 401.842 kb on + strand, within MPMX26_00369at 401.842 kb on + strand, within MPMX26_00369at 401.842 kb on + strand, within MPMX26_00369at 401.842 kb on + strand, within MPMX26_00369at 401.842 kb on + strand, within MPMX26_00369at 401.842 kb on + strand, within MPMX26_00369at 402.003 kb on + strand, within MPMX26_00369at 402.069 kb on + strand, within MPMX26_00369at 402.132 kb on + strand, within MPMX26_00369at 402.147 kb on + strand, within MPMX26_00369at 402.157 kb on + strand, within MPMX26_00369at 402.192 kb on + strand, within MPMX26_00369at 402.225 kb on + strand, within MPMX26_00369at 402.225 kb on + strand, within MPMX26_00369at 402.232 kb on + strand, within MPMX26_00369at 402.232 kb on + strand, within MPMX26_00369at 402.244 kb on + strand, within MPMX26_00369at 402.316 kb on + strand, within MPMX26_00369at 402.316 kb on + strand, within MPMX26_00369at 402.316 kb on + strand, within MPMX26_00369at 402.388 kb on + strand, within MPMX26_00369at 402.456 kb on + strand, within MPMX26_00369at 402.456 kb on + strand, within MPMX26_00369at 402.456 kb on + strand, within MPMX26_00369at 402.456 kb on + strand, within MPMX26_00369at 402.456 kb on + strand, within MPMX26_00369at 402.456 kb on + strand, within MPMX26_00369at 402.456 kb on + strand, within MPMX26_00369at 402.463 kb on + strand, within MPMX26_00369at 402.473 kb on + strand, within MPMX26_00369at 402.483 kb on + strand, within MPMX26_00369at 402.505 kb on + strand, within MPMX26_00369at 402.536 kb on + strand, within MPMX26_00369at 402.570 kb on + strand, within MPMX26_00369at 402.570 kb on + strand, within MPMX26_00369at 402.570 kb on + strand, within MPMX26_00369at 402.570 kb on + strand, within MPMX26_00369at 402.570 kb on + strand, within MPMX26_00369at 402.570 kb on + strand, within MPMX26_00369at 402.570 kb on + strand, within MPMX26_00369at 402.570 kb on + strand, within MPMX26_00369at 402.580 kb on + strand, within MPMX26_00369at 402.585 kb on + strand, within MPMX26_00369at 402.595 kb on + strand, within MPMX26_00369at 402.615 kb on + strand, within MPMX26_00369at 402.616 kb on + strand, within MPMX26_00369at 402.616 kb on + strand, within MPMX26_00369at 402.618 kb on + strand, within MPMX26_00369at 402.637 kb on + strand, within MPMX26_00369at 402.680 kb on + strand, within MPMX26_00369at 402.680 kb on + strand, within MPMX26_00369at 402.688 kb on - strand, within MPMX26_00369at 402.690 kb on + strand, within MPMX26_00369at 402.690 kb on + strand, within MPMX26_00369at 402.690 kb on + strand, within MPMX26_00369at 402.705 kb on + strand, within MPMX26_00369at 402.705 kb on + strand, within MPMX26_00369at 402.713 kb on - strand, within MPMX26_00369at 402.724 kb on + strand, within MPMX26_00369at 402.736 kb on + strand, within MPMX26_00369at 402.736 kb on + strand, within MPMX26_00369at 402.772 kb on + strandat 402.788 kb on + strandat 402.871 kb on + strandat 402.979 kb on + strandat 403.006 kb on + strandat 403.006 kb on + strandat 403.006 kb on + strandat 403.006 kb on + strandat 403.006 kb on + strandat 403.006 kb on + strandat 403.021 kb on + strandat 403.073 kb on + strandat 403.073 kb on + strandat 403.083 kb on + strand, within MPMX26_00370at 403.104 kb on + strand, within MPMX26_00370at 403.113 kb on + strand, within MPMX26_00370at 403.113 kb on + strand, within MPMX26_00370at 403.113 kb on + strand, within MPMX26_00370at 403.113 kb on + strand, within MPMX26_00370at 403.113 kb on + strand, within MPMX26_00370at 403.113 kb on + strand, within MPMX26_00370at 403.113 kb on + strand, within MPMX26_00370at 403.113 kb on + strand, within MPMX26_00370at 403.113 kb on + strand, within MPMX26_00370at 403.113 kb on + strand, within MPMX26_00370at 403.113 kb on + strand, within MPMX26_00370at 403.113 kb on + strand, within MPMX26_00370at 403.113 kb on + strand, within MPMX26_00370at 403.120 kb on + strand, within MPMX26_00370at 403.121 kb on - strand, within MPMX26_00370at 403.127 kb on + strand, within MPMX26_00370at 403.131 kb on + strand, within MPMX26_00370at 403.136 kb on + strand, within MPMX26_00370at 403.145 kb on + strand, within MPMX26_00370at 403.145 kb on + strand, within MPMX26_00370at 403.173 kb on + strand, within MPMX26_00370at 403.173 kb on + strand, within MPMX26_00370at 403.173 kb on + strand, within MPMX26_00370at 403.173 kb on + strand, within MPMX26_00370at 403.173 kb on + strand, within MPMX26_00370at 403.173 kb on + strand, within MPMX26_00370at 403.234 kb on + strand, within MPMX26_00370at 403.236 kb on + strand, within MPMX26_00370at 403.236 kb on + strand, within MPMX26_00370at 403.236 kb on + strand, within MPMX26_00370at 403.236 kb on + strand, within MPMX26_00370at 403.236 kb on + strand, within MPMX26_00370at 403.236 kb on + strand, within MPMX26_00370at 403.237 kb on + strand, within MPMX26_00370at 403.237 kb on + strand, within MPMX26_00370at 403.237 kb on + strand, within MPMX26_00370at 403.244 kb on + strand, within MPMX26_00370at 403.244 kb on + strand, within MPMX26_00370at 403.259 kb on + strand, within MPMX26_00370at 403.272 kb on + strand, within MPMX26_00370at 403.293 kb on + strandat 403.293 kb on + strandat 403.299 kb on + strandat 403.319 kb on + strandat 403.570 kb on + strandat 403.577 kb on + strandat 403.585 kb on + strandat 403.585 kb on + strandat 403.625 kb on + strand, within MPMX26_00371at 403.625 kb on + strand, within MPMX26_00371at 403.663 kb on + strand, within MPMX26_00371at 403.669 kb on + strand, within MPMX26_00371at 403.669 kb on + strand, within MPMX26_00371at 403.675 kb on + strand, within MPMX26_00371at 403.691 kb on + strand, within MPMX26_00371at 403.691 kb on + strand, within MPMX26_00371at 403.772 kb on + strand, within MPMX26_00371at 403.772 kb on + strand, within MPMX26_00371at 403.818 kb on + strand, within MPMX26_00371at 403.846 kb on + strand, within MPMX26_00371at 403.879 kb on + strand, within MPMX26_00371at 403.909 kb on + strand, within MPMX26_00371

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 10 seconds
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400,221 + MPMX26_00368 0.39 +0.5
401,040 + +0.4
401,050 + +0.8
401,055 + +0.4
401,065 + +0.1
401,065 + +0.1
401,133 + -0.0
401,133 + +0.4
401,133 + -0.0
401,133 + -0.9
401,133 + +0.2
401,133 + -0.8
401,133 + -0.1
401,133 + -0.3
401,133 + -0.1
401,133 + -1.1
401,133 + +0.5
401,133 + -0.2
401,133 + -0.0
401,133 + +0.3
401,133 + +0.8
401,133 + -0.9
401,133 + +0.9
401,133 + -0.7
401,133 + -1.7
401,158 + +0.4
401,196 + MPMX26_00369 0.11 -0.6
401,202 + MPMX26_00369 0.11 -0.6
401,206 + MPMX26_00369 0.11 +0.2
401,206 + MPMX26_00369 0.11 -0.8
401,206 + MPMX26_00369 0.11 -0.6
401,206 + MPMX26_00369 0.11 +0.7
401,206 + MPMX26_00369 0.11 -0.4
401,206 + MPMX26_00369 0.11 +0.4
401,214 + MPMX26_00369 0.11 +0.6
401,226 + MPMX26_00369 0.12 -0.7
401,300 + MPMX26_00369 0.16 +0.6
401,337 + MPMX26_00369 0.18 +0.7
401,368 + MPMX26_00369 0.19 -0.5
401,368 + MPMX26_00369 0.19 +0.0
401,368 + MPMX26_00369 0.19 +0.3
401,368 + MPMX26_00369 0.19 +0.6
401,380 + MPMX26_00369 0.20 +0.7
401,380 + MPMX26_00369 0.20 -0.5
401,380 + MPMX26_00369 0.20 -0.4
401,385 + MPMX26_00369 0.20 -0.1
401,385 + MPMX26_00369 0.20 +0.3
401,385 + MPMX26_00369 0.20 -2.1
401,445 + MPMX26_00369 0.23 +0.2
401,498 + MPMX26_00369 0.26 +0.8
401,508 + MPMX26_00369 0.26 -0.2
401,538 + MPMX26_00369 0.28 -0.8
401,605 + MPMX26_00369 0.31 -0.3
401,607 + MPMX26_00369 0.31 +0.9
401,635 + MPMX26_00369 0.33 +2.1
401,658 + MPMX26_00369 0.34 +1.5
401,660 + MPMX26_00369 0.34 +0.7
401,842 + MPMX26_00369 0.43 +1.4
401,842 + MPMX26_00369 0.43 +1.1
401,842 + MPMX26_00369 0.43 -0.5
401,842 + MPMX26_00369 0.43 -0.2
401,842 + MPMX26_00369 0.43 -0.2
401,842 + MPMX26_00369 0.43 +0.9
401,842 + MPMX26_00369 0.43 -0.1
401,842 + MPMX26_00369 0.43 +0.5
402,003 + MPMX26_00369 0.51 -0.1
402,069 + MPMX26_00369 0.55 +0.1
402,132 + MPMX26_00369 0.58 -0.1
402,147 + MPMX26_00369 0.59 -0.2
402,157 + MPMX26_00369 0.59 +0.9
402,192 + MPMX26_00369 0.61 +0.3
402,225 + MPMX26_00369 0.63 +0.3
402,225 + MPMX26_00369 0.63 +0.5
402,232 + MPMX26_00369 0.63 -0.1
402,232 + MPMX26_00369 0.63 -0.5
402,244 + MPMX26_00369 0.63 -0.3
402,316 + MPMX26_00369 0.67 +1.3
402,316 + MPMX26_00369 0.67 +1.1
402,316 + MPMX26_00369 0.67 +0.5
402,388 + MPMX26_00369 0.71 +0.8
402,456 + MPMX26_00369 0.74 -0.0
402,456 + MPMX26_00369 0.74 -0.1
402,456 + MPMX26_00369 0.74 -0.1
402,456 + MPMX26_00369 0.74 +0.2
402,456 + MPMX26_00369 0.74 +1.0
402,456 + MPMX26_00369 0.74 -0.7
402,456 + MPMX26_00369 0.74 -0.4
402,463 + MPMX26_00369 0.75 -1.0
402,473 + MPMX26_00369 0.75 -0.6
402,483 + MPMX26_00369 0.76 +0.5
402,505 + MPMX26_00369 0.77 -0.0
402,536 + MPMX26_00369 0.78 -0.1
402,570 + MPMX26_00369 0.80 +0.1
402,570 + MPMX26_00369 0.80 -0.2
402,570 + MPMX26_00369 0.80 +0.1
402,570 + MPMX26_00369 0.80 -0.1
402,570 + MPMX26_00369 0.80 +0.0
402,570 + MPMX26_00369 0.80 +0.5
402,570 + MPMX26_00369 0.80 -0.1
402,570 + MPMX26_00369 0.80 -0.7
402,580 + MPMX26_00369 0.80 -0.1
402,585 + MPMX26_00369 0.81 -0.1
402,595 + MPMX26_00369 0.81 -1.0
402,615 + MPMX26_00369 0.82 +0.8
402,616 + MPMX26_00369 0.82 -0.8
402,616 + MPMX26_00369 0.82 -1.3
402,618 + MPMX26_00369 0.82 -0.4
402,637 + MPMX26_00369 0.83 -0.1
402,680 + MPMX26_00369 0.86 -0.9
402,680 + MPMX26_00369 0.86 +0.5
402,688 - MPMX26_00369 0.86 +0.2
402,690 + MPMX26_00369 0.86 -0.4
402,690 + MPMX26_00369 0.86 -0.4
402,690 + MPMX26_00369 0.86 +0.2
402,705 + MPMX26_00369 0.87 +0.4
402,705 + MPMX26_00369 0.87 +1.5
402,713 - MPMX26_00369 0.87 +2.1
402,724 + MPMX26_00369 0.88 -0.0
402,736 + MPMX26_00369 0.88 -0.0
402,736 + MPMX26_00369 0.88 +1.0
402,772 + -1.5
402,788 + -0.1
402,871 + -1.2
402,979 + -0.5
403,006 + +0.0
403,006 + +0.2
403,006 + +1.8
403,006 + +0.4
403,006 + +1.0
403,006 + +1.2
403,021 + +0.3
403,073 + +0.1
403,073 + -0.6
403,083 + MPMX26_00370 0.12 +0.7
403,104 + MPMX26_00370 0.20 -0.1
403,113 + MPMX26_00370 0.23 -0.0
403,113 + MPMX26_00370 0.23 +0.5
403,113 + MPMX26_00370 0.23 -0.5
403,113 + MPMX26_00370 0.23 +0.4
403,113 + MPMX26_00370 0.23 +0.3
403,113 + MPMX26_00370 0.23 -0.2
403,113 + MPMX26_00370 0.23 +0.4
403,113 + MPMX26_00370 0.23 +0.8
403,113 + MPMX26_00370 0.23 -0.2
403,113 + MPMX26_00370 0.23 -0.1
403,113 + MPMX26_00370 0.23 +0.3
403,113 + MPMX26_00370 0.23 -0.3
403,113 + MPMX26_00370 0.23 -0.4
403,120 + MPMX26_00370 0.26 +0.2
403,121 - MPMX26_00370 0.27 +1.0
403,127 + MPMX26_00370 0.29 +0.3
403,131 + MPMX26_00370 0.31 -0.7
403,136 + MPMX26_00370 0.33 +0.3
403,145 + MPMX26_00370 0.36 -1.2
403,145 + MPMX26_00370 0.36 +0.2
403,173 + MPMX26_00370 0.47 +1.2
403,173 + MPMX26_00370 0.47 -0.3
403,173 + MPMX26_00370 0.47 +0.4
403,173 + MPMX26_00370 0.47 -0.3
403,173 + MPMX26_00370 0.47 -0.3
403,173 + MPMX26_00370 0.47 -0.2
403,234 + MPMX26_00370 0.71 -0.3
403,236 + MPMX26_00370 0.72 -0.2
403,236 + MPMX26_00370 0.72 -0.1
403,236 + MPMX26_00370 0.72 -0.4
403,236 + MPMX26_00370 0.72 +0.4
403,236 + MPMX26_00370 0.72 -0.2
403,236 + MPMX26_00370 0.72 +0.0
403,237 + MPMX26_00370 0.73 -0.1
403,237 + MPMX26_00370 0.73 -0.4
403,237 + MPMX26_00370 0.73 -0.5
403,244 + MPMX26_00370 0.75 +0.2
403,244 + MPMX26_00370 0.75 +0.4
403,259 + MPMX26_00370 0.81 +0.8
403,272 + MPMX26_00370 0.87 +0.3
403,293 + -0.0
403,293 + -0.1
403,299 + -0.4
403,319 + +0.8
403,570 + +0.4
403,577 + -1.1
403,585 + +0.4
403,585 + -0.4
403,625 + MPMX26_00371 0.11 +1.1
403,625 + MPMX26_00371 0.11 +0.3
403,663 + MPMX26_00371 0.19 +0.1
403,669 + MPMX26_00371 0.20 +0.3
403,669 + MPMX26_00371 0.20 -0.3
403,675 + MPMX26_00371 0.21 +0.3
403,691 + MPMX26_00371 0.24 -0.1
403,691 + MPMX26_00371 0.24 -0.1
403,772 + MPMX26_00371 0.40 +0.5
403,772 + MPMX26_00371 0.40 +0.2
403,818 + MPMX26_00371 0.50 -0.9
403,846 + MPMX26_00371 0.55 +1.4
403,879 + MPMX26_00371 0.62 -0.7
403,909 + MPMX26_00371 0.68 +0.8

Or see this region's nucleotide sequence