Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00244

Experiment: UV exposure at 150J/m2 for 10 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00242 and MPMX26_00243 overlap by 4 nucleotidesMPMX26_00243 and MPMX26_00244 are separated by 1 nucleotidesMPMX26_00244 and MPMX26_00245 overlap by 1 nucleotides MPMX26_00242: MPMX26_00242 - hypothetical protein, at 262,643 to 263,578 _00242 MPMX26_00243: MPMX26_00243 - Dephospho-CoA kinase, at 263,575 to 264,186 _00243 MPMX26_00244: MPMX26_00244 - Type 4 prepilin-like proteins leader peptide-processing enzyme, at 264,188 to 265,048 _00244 MPMX26_00245: MPMX26_00245 - Type II secretion system protein F, at 265,048 to 266,274 _00245 Position (kb) 264 265 266Strain fitness (log2 ratio) -1 0 1 2 3at 263.207 kb on + strand, within MPMX26_00242at 263.207 kb on + strand, within MPMX26_00242at 263.207 kb on + strand, within MPMX26_00242at 263.207 kb on + strand, within MPMX26_00242at 263.207 kb on + strand, within MPMX26_00242at 263.207 kb on + strand, within MPMX26_00242at 263.230 kb on + strand, within MPMX26_00242at 263.259 kb on + strand, within MPMX26_00242at 263.260 kb on + strand, within MPMX26_00242at 263.260 kb on + strand, within MPMX26_00242at 263.260 kb on + strand, within MPMX26_00242at 263.282 kb on + strand, within MPMX26_00242at 263.350 kb on + strand, within MPMX26_00242at 263.413 kb on + strand, within MPMX26_00242at 263.415 kb on + strand, within MPMX26_00242at 263.415 kb on + strand, within MPMX26_00242at 263.445 kb on + strand, within MPMX26_00242at 263.483 kb on + strand, within MPMX26_00242at 263.555 kb on + strandat 263.555 kb on + strandat 263.555 kb on + strandat 263.563 kb on - strandat 263.572 kb on + strandat 263.580 kb on - strandat 263.605 kb on - strandat 263.614 kb on - strandat 263.614 kb on - strandat 264.265 kb on - strandat 264.302 kb on - strand, within MPMX26_00244at 264.302 kb on - strand, within MPMX26_00244at 264.312 kb on - strand, within MPMX26_00244at 264.312 kb on - strand, within MPMX26_00244at 264.356 kb on - strand, within MPMX26_00244at 264.356 kb on - strand, within MPMX26_00244at 264.356 kb on - strand, within MPMX26_00244at 264.356 kb on - strand, within MPMX26_00244at 264.366 kb on - strand, within MPMX26_00244at 264.379 kb on - strand, within MPMX26_00244at 264.404 kb on - strand, within MPMX26_00244at 264.404 kb on - strand, within MPMX26_00244at 264.412 kb on - strand, within MPMX26_00244at 264.457 kb on - strand, within MPMX26_00244at 264.457 kb on - strand, within MPMX26_00244at 264.457 kb on - strand, within MPMX26_00244at 264.496 kb on - strand, within MPMX26_00244at 264.496 kb on - strand, within MPMX26_00244at 264.504 kb on - strand, within MPMX26_00244at 264.521 kb on - strand, within MPMX26_00244at 264.528 kb on - strand, within MPMX26_00244at 264.528 kb on - strand, within MPMX26_00244at 264.530 kb on - strand, within MPMX26_00244at 264.538 kb on - strand, within MPMX26_00244at 264.538 kb on - strand, within MPMX26_00244at 264.538 kb on - strand, within MPMX26_00244at 264.538 kb on - strand, within MPMX26_00244at 264.538 kb on - strand, within MPMX26_00244at 264.538 kb on - strand, within MPMX26_00244at 264.538 kb on - strand, within MPMX26_00244at 264.538 kb on - strand, within MPMX26_00244at 264.538 kb on - strand, within MPMX26_00244at 264.538 kb on - strand, within MPMX26_00244at 264.550 kb on - strand, within MPMX26_00244at 264.550 kb on - strand, within MPMX26_00244at 264.572 kb on - strand, within MPMX26_00244at 264.572 kb on - strand, within MPMX26_00244at 264.572 kb on - strand, within MPMX26_00244at 264.572 kb on - strand, within MPMX26_00244at 264.572 kb on - strand, within MPMX26_00244at 264.572 kb on - strand, within MPMX26_00244at 264.572 kb on - strand, within MPMX26_00244at 264.579 kb on - strand, within MPMX26_00244at 264.613 kb on - strand, within MPMX26_00244at 264.618 kb on - strand, within MPMX26_00244at 264.623 kb on - strand, within MPMX26_00244at 264.635 kb on - strand, within MPMX26_00244at 264.663 kb on - strand, within MPMX26_00244at 264.663 kb on - strand, within MPMX26_00244at 264.663 kb on - strand, within MPMX26_00244at 264.663 kb on - strand, within MPMX26_00244at 264.663 kb on - strand, within MPMX26_00244at 264.663 kb on - strand, within MPMX26_00244at 264.663 kb on - strand, within MPMX26_00244at 264.663 kb on - strand, within MPMX26_00244at 264.663 kb on - strand, within MPMX26_00244at 264.663 kb on - strand, within MPMX26_00244at 264.663 kb on - strand, within MPMX26_00244at 264.663 kb on - strand, within MPMX26_00244at 264.663 kb on - strand, within MPMX26_00244at 264.663 kb on - strand, within MPMX26_00244at 264.668 kb on - strand, within MPMX26_00244at 264.670 kb on - strand, within MPMX26_00244at 264.670 kb on - strand, within MPMX26_00244at 264.670 kb on - strand, within MPMX26_00244at 264.670 kb on - strand, within MPMX26_00244at 264.692 kb on - strand, within MPMX26_00244at 264.692 kb on - strand, within MPMX26_00244at 264.697 kb on - strand, within MPMX26_00244at 264.697 kb on - strand, within MPMX26_00244at 264.697 kb on - strand, within MPMX26_00244at 264.697 kb on - strand, within MPMX26_00244at 264.725 kb on - strand, within MPMX26_00244at 264.725 kb on - strand, within MPMX26_00244at 264.767 kb on - strand, within MPMX26_00244at 264.772 kb on - strand, within MPMX26_00244at 264.772 kb on - strand, within MPMX26_00244at 264.772 kb on - strand, within MPMX26_00244at 264.798 kb on - strand, within MPMX26_00244at 264.819 kb on - strand, within MPMX26_00244at 264.819 kb on - strand, within MPMX26_00244at 264.834 kb on - strand, within MPMX26_00244at 264.838 kb on - strand, within MPMX26_00244at 264.839 kb on - strand, within MPMX26_00244at 264.846 kb on - strand, within MPMX26_00244at 264.883 kb on - strand, within MPMX26_00244at 264.899 kb on - strand, within MPMX26_00244at 264.919 kb on - strand, within MPMX26_00244at 264.920 kb on - strand, within MPMX26_00244at 264.937 kb on - strand, within MPMX26_00244at 265.002 kb on - strandat 265.002 kb on - strandat 265.002 kb on - strandat 265.002 kb on - strandat 265.009 kb on - strandat 265.009 kb on - strandat 265.009 kb on - strandat 265.048 kb on - strandat 265.061 kb on - strandat 265.063 kb on - strandat 265.105 kb on - strandat 265.113 kb on - strandat 265.137 kb on - strandat 265.137 kb on - strandat 265.137 kb on - strandat 265.137 kb on - strandat 265.176 kb on - strand, within MPMX26_00245at 265.241 kb on - strand, within MPMX26_00245at 265.257 kb on - strand, within MPMX26_00245at 265.257 kb on - strand, within MPMX26_00245at 265.257 kb on - strand, within MPMX26_00245at 265.257 kb on - strand, within MPMX26_00245at 265.257 kb on - strand, within MPMX26_00245at 265.262 kb on - strand, within MPMX26_00245at 265.267 kb on - strand, within MPMX26_00245at 265.283 kb on - strand, within MPMX26_00245at 265.373 kb on - strand, within MPMX26_00245at 265.387 kb on - strand, within MPMX26_00245at 265.389 kb on - strand, within MPMX26_00245at 265.409 kb on - strand, within MPMX26_00245at 265.409 kb on - strand, within MPMX26_00245at 265.409 kb on - strand, within MPMX26_00245at 265.409 kb on - strand, within MPMX26_00245at 265.439 kb on - strand, within MPMX26_00245at 265.439 kb on - strand, within MPMX26_00245at 265.444 kb on - strand, within MPMX26_00245at 265.465 kb on - strand, within MPMX26_00245at 265.512 kb on - strand, within MPMX26_00245at 265.587 kb on - strand, within MPMX26_00245at 265.592 kb on - strand, within MPMX26_00245at 265.605 kb on - strand, within MPMX26_00245at 265.615 kb on - strand, within MPMX26_00245at 265.615 kb on - strand, within MPMX26_00245at 265.650 kb on - strand, within MPMX26_00245at 265.655 kb on - strand, within MPMX26_00245at 265.655 kb on - strand, within MPMX26_00245at 265.655 kb on - strand, within MPMX26_00245at 265.655 kb on - strand, within MPMX26_00245at 265.655 kb on - strand, within MPMX26_00245at 265.669 kb on - strand, within MPMX26_00245at 265.699 kb on - strand, within MPMX26_00245at 265.699 kb on - strand, within MPMX26_00245at 265.699 kb on - strand, within MPMX26_00245at 265.699 kb on - strand, within MPMX26_00245at 265.699 kb on - strand, within MPMX26_00245at 265.699 kb on - strand, within MPMX26_00245at 265.699 kb on - strand, within MPMX26_00245at 265.699 kb on - strand, within MPMX26_00245at 265.699 kb on - strand, within MPMX26_00245at 265.699 kb on - strand, within MPMX26_00245at 265.719 kb on - strand, within MPMX26_00245at 265.821 kb on - strand, within MPMX26_00245at 265.830 kb on - strand, within MPMX26_00245at 265.830 kb on - strand, within MPMX26_00245at 265.830 kb on - strand, within MPMX26_00245at 265.830 kb on - strand, within MPMX26_00245at 265.830 kb on - strand, within MPMX26_00245at 265.840 kb on - strand, within MPMX26_00245at 265.840 kb on - strand, within MPMX26_00245at 265.840 kb on - strand, within MPMX26_00245at 265.840 kb on - strand, within MPMX26_00245at 265.840 kb on - strand, within MPMX26_00245at 265.848 kb on - strand, within MPMX26_00245at 265.858 kb on - strand, within MPMX26_00245at 265.858 kb on - strand, within MPMX26_00245at 265.870 kb on - strand, within MPMX26_00245at 265.875 kb on - strand, within MPMX26_00245at 265.900 kb on - strand, within MPMX26_00245at 265.900 kb on - strand, within MPMX26_00245at 265.924 kb on - strand, within MPMX26_00245at 265.924 kb on - strand, within MPMX26_00245at 265.932 kb on - strand, within MPMX26_00245at 265.932 kb on - strand, within MPMX26_00245at 265.953 kb on - strand, within MPMX26_00245

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 10 seconds
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263,207 + MPMX26_00242 0.60 -0.3
263,207 + MPMX26_00242 0.60 +0.4
263,207 + MPMX26_00242 0.60 -0.8
263,207 + MPMX26_00242 0.60 -0.3
263,207 + MPMX26_00242 0.60 -0.8
263,207 + MPMX26_00242 0.60 +0.1
263,230 + MPMX26_00242 0.63 -0.1
263,259 + MPMX26_00242 0.66 -0.3
263,260 + MPMX26_00242 0.66 -0.0
263,260 + MPMX26_00242 0.66 -0.3
263,260 + MPMX26_00242 0.66 -0.2
263,282 + MPMX26_00242 0.68 +0.1
263,350 + MPMX26_00242 0.76 -0.1
263,413 + MPMX26_00242 0.82 -0.1
263,415 + MPMX26_00242 0.82 +2.1
263,415 + MPMX26_00242 0.82 -0.4
263,445 + MPMX26_00242 0.86 +0.5
263,483 + MPMX26_00242 0.90 +0.7
263,555 + -0.1
263,555 + -0.5
263,555 + +1.4
263,563 - -0.3
263,572 + +2.1
263,580 - +2.9
263,605 - -0.9
263,614 - -0.4
263,614 - -0.0
264,265 - +0.3
264,302 - MPMX26_00244 0.13 +0.5
264,302 - MPMX26_00244 0.13 +1.1
264,312 - MPMX26_00244 0.14 +0.4
264,312 - MPMX26_00244 0.14 +0.9
264,356 - MPMX26_00244 0.20 +0.5
264,356 - MPMX26_00244 0.20 +0.8
264,356 - MPMX26_00244 0.20 +1.0
264,356 - MPMX26_00244 0.20 +0.5
264,366 - MPMX26_00244 0.21 +0.5
264,379 - MPMX26_00244 0.22 +0.5
264,404 - MPMX26_00244 0.25 +0.8
264,404 - MPMX26_00244 0.25 +0.5
264,412 - MPMX26_00244 0.26 +0.6
264,457 - MPMX26_00244 0.31 +0.6
264,457 - MPMX26_00244 0.31 +1.1
264,457 - MPMX26_00244 0.31 +0.4
264,496 - MPMX26_00244 0.36 +1.1
264,496 - MPMX26_00244 0.36 +0.6
264,504 - MPMX26_00244 0.37 +0.3
264,521 - MPMX26_00244 0.39 +0.4
264,528 - MPMX26_00244 0.39 +0.8
264,528 - MPMX26_00244 0.39 -0.2
264,530 - MPMX26_00244 0.40 +0.3
264,538 - MPMX26_00244 0.41 +0.2
264,538 - MPMX26_00244 0.41 +0.7
264,538 - MPMX26_00244 0.41 +0.6
264,538 - MPMX26_00244 0.41 +0.8
264,538 - MPMX26_00244 0.41 +0.5
264,538 - MPMX26_00244 0.41 +0.1
264,538 - MPMX26_00244 0.41 +0.6
264,538 - MPMX26_00244 0.41 +1.0
264,538 - MPMX26_00244 0.41 +0.5
264,538 - MPMX26_00244 0.41 +0.4
264,550 - MPMX26_00244 0.42 +0.3
264,550 - MPMX26_00244 0.42 +0.4
264,572 - MPMX26_00244 0.45 +0.6
264,572 - MPMX26_00244 0.45 +0.4
264,572 - MPMX26_00244 0.45 +0.6
264,572 - MPMX26_00244 0.45 +0.8
264,572 - MPMX26_00244 0.45 +0.9
264,572 - MPMX26_00244 0.45 +1.4
264,572 - MPMX26_00244 0.45 +0.8
264,579 - MPMX26_00244 0.45 +0.7
264,613 - MPMX26_00244 0.49 +0.8
264,618 - MPMX26_00244 0.50 +0.3
264,623 - MPMX26_00244 0.51 +0.7
264,635 - MPMX26_00244 0.52 +0.6
264,663 - MPMX26_00244 0.55 +0.5
264,663 - MPMX26_00244 0.55 +0.3
264,663 - MPMX26_00244 0.55 -0.3
264,663 - MPMX26_00244 0.55 +1.0
264,663 - MPMX26_00244 0.55 +0.3
264,663 - MPMX26_00244 0.55 +1.3
264,663 - MPMX26_00244 0.55 +0.9
264,663 - MPMX26_00244 0.55 +1.0
264,663 - MPMX26_00244 0.55 -0.1
264,663 - MPMX26_00244 0.55 +1.0
264,663 - MPMX26_00244 0.55 -1.0
264,663 - MPMX26_00244 0.55 +0.6
264,663 - MPMX26_00244 0.55 -0.7
264,663 - MPMX26_00244 0.55 +1.2
264,668 - MPMX26_00244 0.56 +0.6
264,670 - MPMX26_00244 0.56 +1.3
264,670 - MPMX26_00244 0.56 +1.0
264,670 - MPMX26_00244 0.56 +0.4
264,670 - MPMX26_00244 0.56 +1.0
264,692 - MPMX26_00244 0.59 +0.6
264,692 - MPMX26_00244 0.59 +0.8
264,697 - MPMX26_00244 0.59 +0.7
264,697 - MPMX26_00244 0.59 +0.8
264,697 - MPMX26_00244 0.59 +1.0
264,697 - MPMX26_00244 0.59 +0.7
264,725 - MPMX26_00244 0.62 +0.7
264,725 - MPMX26_00244 0.62 +0.5
264,767 - MPMX26_00244 0.67 +0.7
264,772 - MPMX26_00244 0.68 +0.8
264,772 - MPMX26_00244 0.68 +0.7
264,772 - MPMX26_00244 0.68 +2.0
264,798 - MPMX26_00244 0.71 +1.1
264,819 - MPMX26_00244 0.73 +1.8
264,819 - MPMX26_00244 0.73 +0.2
264,834 - MPMX26_00244 0.75 +0.3
264,838 - MPMX26_00244 0.75 +0.7
264,839 - MPMX26_00244 0.76 +0.3
264,846 - MPMX26_00244 0.76 +0.9
264,883 - MPMX26_00244 0.81 +0.2
264,899 - MPMX26_00244 0.83 +0.4
264,919 - MPMX26_00244 0.85 -0.1
264,920 - MPMX26_00244 0.85 -0.5
264,937 - MPMX26_00244 0.87 +0.8
265,002 - +0.8
265,002 - +0.5
265,002 - +0.2
265,002 - +0.6
265,009 - +0.7
265,009 - +1.1
265,009 - +1.2
265,048 - +0.4
265,061 - -0.1
265,063 - +0.2
265,105 - +0.2
265,113 - +0.9
265,137 - +0.7
265,137 - +1.0
265,137 - +0.8
265,137 - +0.8
265,176 - MPMX26_00245 0.10 +0.7
265,241 - MPMX26_00245 0.16 +0.9
265,257 - MPMX26_00245 0.17 +0.6
265,257 - MPMX26_00245 0.17 +0.2
265,257 - MPMX26_00245 0.17 +0.8
265,257 - MPMX26_00245 0.17 +0.5
265,257 - MPMX26_00245 0.17 +0.3
265,262 - MPMX26_00245 0.17 +0.6
265,267 - MPMX26_00245 0.18 +0.4
265,283 - MPMX26_00245 0.19 +0.4
265,373 - MPMX26_00245 0.26 +0.5
265,387 - MPMX26_00245 0.28 +0.4
265,389 - MPMX26_00245 0.28 +0.9
265,409 - MPMX26_00245 0.29 +0.8
265,409 - MPMX26_00245 0.29 -0.2
265,409 - MPMX26_00245 0.29 +0.5
265,409 - MPMX26_00245 0.29 +0.6
265,439 - MPMX26_00245 0.32 +1.2
265,439 - MPMX26_00245 0.32 +0.8
265,444 - MPMX26_00245 0.32 +0.7
265,465 - MPMX26_00245 0.34 +0.6
265,512 - MPMX26_00245 0.38 +0.8
265,587 - MPMX26_00245 0.44 +1.1
265,592 - MPMX26_00245 0.44 +0.3
265,605 - MPMX26_00245 0.45 +0.3
265,615 - MPMX26_00245 0.46 +0.6
265,615 - MPMX26_00245 0.46 +0.7
265,650 - MPMX26_00245 0.49 +0.2
265,655 - MPMX26_00245 0.49 +0.7
265,655 - MPMX26_00245 0.49 +0.4
265,655 - MPMX26_00245 0.49 +0.8
265,655 - MPMX26_00245 0.49 -0.1
265,655 - MPMX26_00245 0.49 +0.6
265,669 - MPMX26_00245 0.51 +1.0
265,699 - MPMX26_00245 0.53 +0.2
265,699 - MPMX26_00245 0.53 +0.2
265,699 - MPMX26_00245 0.53 +0.7
265,699 - MPMX26_00245 0.53 +1.1
265,699 - MPMX26_00245 0.53 +0.4
265,699 - MPMX26_00245 0.53 +0.7
265,699 - MPMX26_00245 0.53 +0.5
265,699 - MPMX26_00245 0.53 +0.5
265,699 - MPMX26_00245 0.53 +0.2
265,699 - MPMX26_00245 0.53 +0.6
265,719 - MPMX26_00245 0.55 +0.6
265,821 - MPMX26_00245 0.63 +0.0
265,830 - MPMX26_00245 0.64 +0.7
265,830 - MPMX26_00245 0.64 +0.5
265,830 - MPMX26_00245 0.64 +0.4
265,830 - MPMX26_00245 0.64 +0.7
265,830 - MPMX26_00245 0.64 +1.5
265,840 - MPMX26_00245 0.65 +1.0
265,840 - MPMX26_00245 0.65 +0.9
265,840 - MPMX26_00245 0.65 -0.0
265,840 - MPMX26_00245 0.65 +0.8
265,840 - MPMX26_00245 0.65 +0.4
265,848 - MPMX26_00245 0.65 +0.5
265,858 - MPMX26_00245 0.66 +0.7
265,858 - MPMX26_00245 0.66 +1.0
265,870 - MPMX26_00245 0.67 +0.8
265,875 - MPMX26_00245 0.67 +0.2
265,900 - MPMX26_00245 0.69 +0.1
265,900 - MPMX26_00245 0.69 +0.3
265,924 - MPMX26_00245 0.71 +0.8
265,924 - MPMX26_00245 0.71 +0.4
265,932 - MPMX26_00245 0.72 +0.2
265,932 - MPMX26_00245 0.72 +0.9
265,953 - MPMX26_00245 0.74 +0.2

Or see this region's nucleotide sequence