Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00036

Experiment: UV exposure at 150J/m2 for 10 seconds

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_00034 and MPMX26_00035 are separated by 182 nucleotidesMPMX26_00035 and MPMX26_00036 are separated by 79 nucleotidesMPMX26_00036 and MPMX26_00037 are separated by 136 nucleotidesMPMX26_00037 and MPMX26_00038 are separated by 173 nucleotides MPMX26_00034: MPMX26_00034 - Ubiquinone biosynthesis O-methyltransferase, at 36,590 to 37,309 _00034 MPMX26_00035: MPMX26_00035 - Thiol:disulfide interchange protein DsbA, at 37,492 to 38,109 _00035 MPMX26_00036: MPMX26_00036 - hypothetical protein, at 38,189 to 38,824 _00036 MPMX26_00037: MPMX26_00037 - HTH-type transcriptional repressor FabR, at 38,961 to 39,596 _00037 MPMX26_00038: MPMX26_00038 - NADPH oxidoreductase, at 39,770 to 40,789 _00038 Position (kb) 38 39Strain fitness (log2 ratio) -2 -1 0 1at 37.480 kb on + strandat 37.525 kb on + strandat 37.547 kb on + strandat 37.578 kb on + strand, within MPMX26_00035at 37.578 kb on + strand, within MPMX26_00035at 37.578 kb on + strand, within MPMX26_00035at 37.578 kb on + strand, within MPMX26_00035at 37.578 kb on + strand, within MPMX26_00035at 37.578 kb on + strand, within MPMX26_00035at 37.578 kb on + strand, within MPMX26_00035at 37.578 kb on + strand, within MPMX26_00035at 37.578 kb on + strand, within MPMX26_00035at 37.578 kb on + strand, within MPMX26_00035at 37.588 kb on + strand, within MPMX26_00035at 37.593 kb on + strand, within MPMX26_00035at 37.593 kb on + strand, within MPMX26_00035at 37.593 kb on + strand, within MPMX26_00035at 37.598 kb on + strand, within MPMX26_00035at 37.601 kb on - strand, within MPMX26_00035at 37.608 kb on + strand, within MPMX26_00035at 37.608 kb on + strand, within MPMX26_00035at 37.621 kb on + strand, within MPMX26_00035at 37.625 kb on + strand, within MPMX26_00035at 37.657 kb on + strand, within MPMX26_00035at 37.667 kb on + strand, within MPMX26_00035at 37.667 kb on + strand, within MPMX26_00035at 37.667 kb on + strand, within MPMX26_00035at 37.667 kb on + strand, within MPMX26_00035at 37.667 kb on + strand, within MPMX26_00035at 37.667 kb on + strand, within MPMX26_00035at 37.667 kb on + strand, within MPMX26_00035at 37.667 kb on + strand, within MPMX26_00035at 37.667 kb on + strand, within MPMX26_00035at 37.667 kb on + strand, within MPMX26_00035at 37.667 kb on + strand, within MPMX26_00035at 37.667 kb on + strand, within MPMX26_00035at 37.667 kb on + strand, within MPMX26_00035at 37.667 kb on + strand, within MPMX26_00035at 37.667 kb on + strand, within MPMX26_00035at 37.667 kb on + strand, within MPMX26_00035at 37.667 kb on + strand, within MPMX26_00035at 37.687 kb on + strand, within MPMX26_00035at 37.687 kb on + strand, within MPMX26_00035at 37.687 kb on + strand, within MPMX26_00035at 37.692 kb on + strand, within MPMX26_00035at 37.692 kb on + strand, within MPMX26_00035at 37.697 kb on + strand, within MPMX26_00035at 37.725 kb on + strand, within MPMX26_00035at 37.767 kb on + strand, within MPMX26_00035at 37.778 kb on + strand, within MPMX26_00035at 37.778 kb on + strand, within MPMX26_00035at 37.788 kb on + strand, within MPMX26_00035at 37.788 kb on + strand, within MPMX26_00035at 37.788 kb on + strand, within MPMX26_00035at 37.788 kb on + strand, within MPMX26_00035at 37.796 kb on - strand, within MPMX26_00035at 37.825 kb on + strand, within MPMX26_00035at 37.825 kb on + strand, within MPMX26_00035at 37.862 kb on + strand, within MPMX26_00035at 37.871 kb on + strand, within MPMX26_00035at 37.899 kb on + strand, within MPMX26_00035at 37.899 kb on + strand, within MPMX26_00035at 37.902 kb on + strand, within MPMX26_00035at 37.904 kb on + strand, within MPMX26_00035at 37.904 kb on + strand, within MPMX26_00035at 37.904 kb on + strand, within MPMX26_00035at 37.904 kb on + strand, within MPMX26_00035at 37.904 kb on + strand, within MPMX26_00035at 37.904 kb on + strand, within MPMX26_00035at 37.906 kb on + strand, within MPMX26_00035at 37.912 kb on - strand, within MPMX26_00035at 37.932 kb on + strand, within MPMX26_00035at 37.932 kb on + strand, within MPMX26_00035at 37.968 kb on + strand, within MPMX26_00035at 37.968 kb on + strand, within MPMX26_00035at 37.986 kb on + strand, within MPMX26_00035at 38.008 kb on - strand, within MPMX26_00035at 38.017 kb on + strand, within MPMX26_00035at 38.033 kb on + strand, within MPMX26_00035at 38.051 kb on + strandat 38.101 kb on + strandat 38.147 kb on + strandat 38.223 kb on + strandat 38.227 kb on - strandat 38.270 kb on - strand, within MPMX26_00036at 38.270 kb on - strand, within MPMX26_00036at 38.270 kb on - strand, within MPMX26_00036at 38.337 kb on - strand, within MPMX26_00036at 38.337 kb on - strand, within MPMX26_00036at 38.337 kb on - strand, within MPMX26_00036at 38.337 kb on - strand, within MPMX26_00036at 38.337 kb on - strand, within MPMX26_00036at 38.345 kb on - strand, within MPMX26_00036at 38.361 kb on - strand, within MPMX26_00036at 38.363 kb on - strand, within MPMX26_00036at 38.363 kb on - strand, within MPMX26_00036at 38.388 kb on - strand, within MPMX26_00036at 38.427 kb on - strand, within MPMX26_00036at 38.427 kb on - strand, within MPMX26_00036at 38.442 kb on - strand, within MPMX26_00036at 38.459 kb on - strand, within MPMX26_00036at 38.464 kb on - strand, within MPMX26_00036at 38.469 kb on - strand, within MPMX26_00036at 38.472 kb on + strand, within MPMX26_00036at 38.472 kb on + strand, within MPMX26_00036at 38.485 kb on - strand, within MPMX26_00036at 38.485 kb on - strand, within MPMX26_00036at 38.485 kb on - strand, within MPMX26_00036at 38.485 kb on - strand, within MPMX26_00036at 38.493 kb on + strand, within MPMX26_00036at 38.501 kb on - strand, within MPMX26_00036at 38.501 kb on - strand, within MPMX26_00036at 38.501 kb on - strand, within MPMX26_00036at 38.501 kb on - strand, within MPMX26_00036at 38.501 kb on - strand, within MPMX26_00036at 38.515 kb on - strand, within MPMX26_00036at 38.515 kb on - strand, within MPMX26_00036at 38.517 kb on - strand, within MPMX26_00036at 38.517 kb on - strand, within MPMX26_00036at 38.517 kb on - strand, within MPMX26_00036at 38.517 kb on - strand, within MPMX26_00036at 38.588 kb on - strand, within MPMX26_00036at 38.596 kb on - strand, within MPMX26_00036at 38.684 kb on - strand, within MPMX26_00036at 38.684 kb on - strand, within MPMX26_00036at 38.684 kb on - strand, within MPMX26_00036at 38.684 kb on - strand, within MPMX26_00036at 38.686 kb on + strand, within MPMX26_00036at 38.686 kb on + strand, within MPMX26_00036at 38.694 kb on - strand, within MPMX26_00036at 38.708 kb on - strand, within MPMX26_00036at 38.710 kb on - strand, within MPMX26_00036at 38.710 kb on - strand, within MPMX26_00036at 38.726 kb on - strand, within MPMX26_00036at 38.726 kb on - strand, within MPMX26_00036at 38.817 kb on + strandat 38.856 kb on - strandat 38.961 kb on - strandat 38.961 kb on - strandat 38.961 kb on - strandat 38.961 kb on - strandat 38.966 kb on - strandat 38.973 kb on - strandat 39.010 kb on - strandat 39.012 kb on - strandat 39.053 kb on - strand, within MPMX26_00037at 39.060 kb on - strand, within MPMX26_00037at 39.060 kb on - strand, within MPMX26_00037at 39.065 kb on - strand, within MPMX26_00037at 39.065 kb on - strand, within MPMX26_00037at 39.083 kb on - strand, within MPMX26_00037at 39.083 kb on - strand, within MPMX26_00037at 39.100 kb on - strand, within MPMX26_00037at 39.102 kb on - strand, within MPMX26_00037at 39.102 kb on - strand, within MPMX26_00037at 39.121 kb on - strand, within MPMX26_00037at 39.121 kb on - strand, within MPMX26_00037at 39.157 kb on - strand, within MPMX26_00037at 39.164 kb on + strand, within MPMX26_00037at 39.247 kb on - strand, within MPMX26_00037at 39.247 kb on - strand, within MPMX26_00037at 39.247 kb on - strand, within MPMX26_00037at 39.247 kb on - strand, within MPMX26_00037at 39.281 kb on + strand, within MPMX26_00037at 39.281 kb on + strand, within MPMX26_00037at 39.289 kb on - strand, within MPMX26_00037at 39.299 kb on - strand, within MPMX26_00037at 39.322 kb on - strand, within MPMX26_00037at 39.322 kb on - strand, within MPMX26_00037at 39.365 kb on - strand, within MPMX26_00037at 39.365 kb on - strand, within MPMX26_00037at 39.365 kb on - strand, within MPMX26_00037at 39.380 kb on - strand, within MPMX26_00037at 39.411 kb on - strand, within MPMX26_00037at 39.421 kb on - strand, within MPMX26_00037at 39.422 kb on - strand, within MPMX26_00037at 39.429 kb on - strand, within MPMX26_00037at 39.467 kb on - strand, within MPMX26_00037at 39.472 kb on - strand, within MPMX26_00037at 39.472 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.505 kb on - strand, within MPMX26_00037at 39.526 kb on + strand, within MPMX26_00037at 39.526 kb on - strand, within MPMX26_00037at 39.531 kb on - strand, within MPMX26_00037at 39.531 kb on - strand, within MPMX26_00037at 39.563 kb on - strandat 39.563 kb on - strandat 39.563 kb on - strandat 39.563 kb on - strandat 39.563 kb on - strandat 39.563 kb on - strandat 39.572 kb on - strandat 39.627 kb on - strandat 39.627 kb on - strandat 39.627 kb on - strandat 39.627 kb on - strandat 39.759 kb on + strandat 39.759 kb on + strandat 39.765 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 10 seconds
remove
37,480 + -0.1
37,525 + +0.3
37,547 + +0.6
37,578 + MPMX26_00035 0.14 -0.2
37,578 + MPMX26_00035 0.14 +0.0
37,578 + MPMX26_00035 0.14 -0.8
37,578 + MPMX26_00035 0.14 -0.3
37,578 + MPMX26_00035 0.14 -0.4
37,578 + MPMX26_00035 0.14 -2.0
37,578 + MPMX26_00035 0.14 +0.4
37,578 + MPMX26_00035 0.14 +0.1
37,578 + MPMX26_00035 0.14 -0.4
37,578 + MPMX26_00035 0.14 -1.1
37,588 + MPMX26_00035 0.16 +0.0
37,593 + MPMX26_00035 0.16 -0.2
37,593 + MPMX26_00035 0.16 -1.0
37,593 + MPMX26_00035 0.16 -0.6
37,598 + MPMX26_00035 0.17 -1.1
37,601 - MPMX26_00035 0.18 +0.7
37,608 + MPMX26_00035 0.19 +0.3
37,608 + MPMX26_00035 0.19 -0.8
37,621 + MPMX26_00035 0.21 -0.8
37,625 + MPMX26_00035 0.22 -0.2
37,657 + MPMX26_00035 0.27 +0.1
37,667 + MPMX26_00035 0.28 -1.0
37,667 + MPMX26_00035 0.28 -0.5
37,667 + MPMX26_00035 0.28 -1.8
37,667 + MPMX26_00035 0.28 -0.0
37,667 + MPMX26_00035 0.28 +0.1
37,667 + MPMX26_00035 0.28 -0.4
37,667 + MPMX26_00035 0.28 +0.8
37,667 + MPMX26_00035 0.28 +0.6
37,667 + MPMX26_00035 0.28 -0.7
37,667 + MPMX26_00035 0.28 -1.0
37,667 + MPMX26_00035 0.28 +1.2
37,667 + MPMX26_00035 0.28 +0.4
37,667 + MPMX26_00035 0.28 -0.6
37,667 + MPMX26_00035 0.28 -0.2
37,667 + MPMX26_00035 0.28 +0.1
37,667 + MPMX26_00035 0.28 -0.9
37,667 + MPMX26_00035 0.28 +0.1
37,687 + MPMX26_00035 0.32 -0.1
37,687 + MPMX26_00035 0.32 -0.2
37,687 + MPMX26_00035 0.32 -0.2
37,692 + MPMX26_00035 0.32 -0.5
37,692 + MPMX26_00035 0.32 -0.2
37,697 + MPMX26_00035 0.33 -0.7
37,725 + MPMX26_00035 0.38 +0.3
37,767 + MPMX26_00035 0.44 +0.0
37,778 + MPMX26_00035 0.46 +0.6
37,778 + MPMX26_00035 0.46 +1.1
37,788 + MPMX26_00035 0.48 -0.6
37,788 + MPMX26_00035 0.48 -1.0
37,788 + MPMX26_00035 0.48 -0.4
37,788 + MPMX26_00035 0.48 +0.2
37,796 - MPMX26_00035 0.49 -1.0
37,825 + MPMX26_00035 0.54 -0.3
37,825 + MPMX26_00035 0.54 -0.1
37,862 + MPMX26_00035 0.60 -0.5
37,871 + MPMX26_00035 0.61 -1.2
37,899 + MPMX26_00035 0.66 -0.1
37,899 + MPMX26_00035 0.66 +0.3
37,902 + MPMX26_00035 0.66 +0.2
37,904 + MPMX26_00035 0.67 -0.1
37,904 + MPMX26_00035 0.67 -0.2
37,904 + MPMX26_00035 0.67 +0.2
37,904 + MPMX26_00035 0.67 +0.3
37,904 + MPMX26_00035 0.67 -0.4
37,904 + MPMX26_00035 0.67 +0.5
37,906 + MPMX26_00035 0.67 +0.5
37,912 - MPMX26_00035 0.68 +0.1
37,932 + MPMX26_00035 0.71 +0.2
37,932 + MPMX26_00035 0.71 -0.6
37,968 + MPMX26_00035 0.77 +0.4
37,968 + MPMX26_00035 0.77 +0.4
37,986 + MPMX26_00035 0.80 +0.3
38,008 - MPMX26_00035 0.83 +0.6
38,017 + MPMX26_00035 0.85 -0.2
38,033 + MPMX26_00035 0.88 +0.3
38,051 + +0.2
38,101 + +0.1
38,147 + -0.7
38,223 + -0.7
38,227 - +1.4
38,270 - MPMX26_00036 0.13 -0.4
38,270 - MPMX26_00036 0.13 -0.1
38,270 - MPMX26_00036 0.13 -0.5
38,337 - MPMX26_00036 0.23 +0.8
38,337 - MPMX26_00036 0.23 -0.0
38,337 - MPMX26_00036 0.23 +0.2
38,337 - MPMX26_00036 0.23 +0.1
38,337 - MPMX26_00036 0.23 -0.4
38,345 - MPMX26_00036 0.25 -1.0
38,361 - MPMX26_00036 0.27 -0.6
38,363 - MPMX26_00036 0.27 -0.1
38,363 - MPMX26_00036 0.27 -0.3
38,388 - MPMX26_00036 0.31 -0.0
38,427 - MPMX26_00036 0.37 -0.0
38,427 - MPMX26_00036 0.37 -0.3
38,442 - MPMX26_00036 0.40 +0.1
38,459 - MPMX26_00036 0.42 -0.1
38,464 - MPMX26_00036 0.43 -0.0
38,469 - MPMX26_00036 0.44 -0.4
38,472 + MPMX26_00036 0.44 +0.7
38,472 + MPMX26_00036 0.44 -0.2
38,485 - MPMX26_00036 0.47 -0.0
38,485 - MPMX26_00036 0.47 -0.1
38,485 - MPMX26_00036 0.47 +0.5
38,485 - MPMX26_00036 0.47 -0.1
38,493 + MPMX26_00036 0.48 +0.4
38,501 - MPMX26_00036 0.49 +0.5
38,501 - MPMX26_00036 0.49 +0.1
38,501 - MPMX26_00036 0.49 -0.4
38,501 - MPMX26_00036 0.49 +0.6
38,501 - MPMX26_00036 0.49 -0.1
38,515 - MPMX26_00036 0.51 -0.5
38,515 - MPMX26_00036 0.51 +0.0
38,517 - MPMX26_00036 0.52 +0.0
38,517 - MPMX26_00036 0.52 -0.9
38,517 - MPMX26_00036 0.52 -0.7
38,517 - MPMX26_00036 0.52 -1.0
38,588 - MPMX26_00036 0.63 -0.2
38,596 - MPMX26_00036 0.64 -0.5
38,684 - MPMX26_00036 0.78 +0.0
38,684 - MPMX26_00036 0.78 +0.2
38,684 - MPMX26_00036 0.78 -0.0
38,684 - MPMX26_00036 0.78 +0.2
38,686 + MPMX26_00036 0.78 -0.7
38,686 + MPMX26_00036 0.78 +0.1
38,694 - MPMX26_00036 0.79 +0.1
38,708 - MPMX26_00036 0.82 +0.6
38,710 - MPMX26_00036 0.82 -0.3
38,710 - MPMX26_00036 0.82 +0.6
38,726 - MPMX26_00036 0.84 -0.0
38,726 - MPMX26_00036 0.84 -1.0
38,817 + +0.2
38,856 - +1.1
38,961 - -0.2
38,961 - +0.8
38,961 - +1.1
38,961 - +0.8
38,966 - +1.0
38,973 - -0.2
39,010 - +0.4
39,012 - -0.3
39,053 - MPMX26_00037 0.14 +0.1
39,060 - MPMX26_00037 0.16 -0.9
39,060 - MPMX26_00037 0.16 -1.2
39,065 - MPMX26_00037 0.16 -0.4
39,065 - MPMX26_00037 0.16 -0.3
39,083 - MPMX26_00037 0.19 -1.1
39,083 - MPMX26_00037 0.19 -0.5
39,100 - MPMX26_00037 0.22 -0.8
39,102 - MPMX26_00037 0.22 -0.7
39,102 - MPMX26_00037 0.22 -0.2
39,121 - MPMX26_00037 0.25 -0.6
39,121 - MPMX26_00037 0.25 -0.8
39,157 - MPMX26_00037 0.31 -0.2
39,164 + MPMX26_00037 0.32 +0.1
39,247 - MPMX26_00037 0.45 +0.1
39,247 - MPMX26_00037 0.45 +1.1
39,247 - MPMX26_00037 0.45 +0.2
39,247 - MPMX26_00037 0.45 -0.2
39,281 + MPMX26_00037 0.50 +0.8
39,281 + MPMX26_00037 0.50 -0.9
39,289 - MPMX26_00037 0.52 -1.1
39,299 - MPMX26_00037 0.53 -0.5
39,322 - MPMX26_00037 0.57 -0.5
39,322 - MPMX26_00037 0.57 +0.6
39,365 - MPMX26_00037 0.64 +0.5
39,365 - MPMX26_00037 0.64 -1.6
39,365 - MPMX26_00037 0.64 -0.7
39,380 - MPMX26_00037 0.66 -1.7
39,411 - MPMX26_00037 0.71 -1.2
39,421 - MPMX26_00037 0.72 +0.5
39,422 - MPMX26_00037 0.72 -0.4
39,429 - MPMX26_00037 0.74 -0.7
39,467 - MPMX26_00037 0.80 -2.7
39,472 - MPMX26_00037 0.80 -0.2
39,472 - MPMX26_00037 0.80 -0.2
39,505 - MPMX26_00037 0.86 -0.7
39,505 - MPMX26_00037 0.86 -1.1
39,505 - MPMX26_00037 0.86 +0.7
39,505 - MPMX26_00037 0.86 -0.3
39,505 - MPMX26_00037 0.86 +0.1
39,505 - MPMX26_00037 0.86 -1.1
39,505 - MPMX26_00037 0.86 -0.3
39,505 - MPMX26_00037 0.86 -0.2
39,505 - MPMX26_00037 0.86 +0.5
39,505 - MPMX26_00037 0.86 +0.3
39,505 - MPMX26_00037 0.86 -0.3
39,505 - MPMX26_00037 0.86 -0.8
39,505 - MPMX26_00037 0.86 -1.0
39,505 - MPMX26_00037 0.86 -2.1
39,505 - MPMX26_00037 0.86 -0.7
39,505 - MPMX26_00037 0.86 +0.4
39,526 + MPMX26_00037 0.89 -0.2
39,526 - MPMX26_00037 0.89 -0.6
39,531 - MPMX26_00037 0.90 -0.5
39,531 - MPMX26_00037 0.90 -0.2
39,563 - -0.5
39,563 - -0.4
39,563 - -0.3
39,563 - -0.8
39,563 - +0.7
39,563 - -0.6
39,572 - -0.2
39,627 - +0.6
39,627 - -0.4
39,627 - +0.3
39,627 - -0.3
39,759 + -0.7
39,759 + +0.1
39,765 - -1.5

Or see this region's nucleotide sequence