Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01724

Experiment: UV exposure at 150J/m2 for 10 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01723 and MPMX26_01724 are separated by 280 nucleotidesMPMX26_01724 and MPMX26_01725 are separated by 17 nucleotidesMPMX26_01725 and MPMX26_01726 are separated by 18 nucleotides MPMX26_01723: MPMX26_01723 - Putative aminoacrylate hydrolase RutD, at 1,779,198 to 1,779,980 _01723 MPMX26_01724: MPMX26_01724 - hypothetical protein, at 1,780,261 to 1,780,794 _01724 MPMX26_01725: MPMX26_01725 - hypothetical protein, at 1,780,812 to 1,781,618 _01725 MPMX26_01726: MPMX26_01726 - Glutamine--tRNA ligase, at 1,781,637 to 1,783,361 _01726 Position (kb) 1780 1781Strain fitness (log2 ratio) -1 0 1at 1780.375 kb on + strand, within MPMX26_01724at 1780.492 kb on + strand, within MPMX26_01724at 1781.656 kb on - strandat 1781.656 kb on - strandat 1781.656 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 10 seconds
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1,780,375 + MPMX26_01724 0.21 +0.6
1,780,492 + MPMX26_01724 0.43 -1.0
1,781,656 - -0.2
1,781,656 - +0.6
1,781,656 - +1.2

Or see this region's nucleotide sequence