Experiment: UV exposure at 150J/m2 for 10 seconds
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01265 and MPMX26_01266 are separated by 278 nucleotides MPMX26_01266 and MPMX26_01267 are separated by 14 nucleotides MPMX26_01267 and MPMX26_01268 are separated by 230 nucleotides
MPMX26_01265: MPMX26_01265 - HTH-type transcriptional regulator DmlR, at 1,338,527 to 1,339,429
_01265
MPMX26_01266: MPMX26_01266 - hypothetical protein, at 1,339,708 to 1,340,043
_01266
MPMX26_01267: MPMX26_01267 - Glycine cleavage system transcriptional activator, at 1,340,058 to 1,340,993
_01267
MPMX26_01268: MPMX26_01268 - Acyl-CoA dehydrogenase, at 1,341,224 to 1,342,447
_01268
Position (kb) 1340
1341 Strain fitness (log2 ratio) -1
0
1
2 at 1339.822 kb on + strand, within MPMX26_01266 at 1339.849 kb on + strand, within MPMX26_01266 at 1339.849 kb on + strand, within MPMX26_01266 at 1339.954 kb on + strand, within MPMX26_01266 at 1339.959 kb on + strand, within MPMX26_01266 at 1340.007 kb on + strand, within MPMX26_01266 at 1340.013 kb on + strand at 1340.441 kb on - strand, within MPMX26_01267 at 1340.475 kb on - strand, within MPMX26_01267 at 1340.534 kb on - strand, within MPMX26_01267 at 1340.690 kb on - strand, within MPMX26_01267 at 1340.715 kb on - strand, within MPMX26_01267 at 1340.753 kb on - strand, within MPMX26_01267 at 1340.768 kb on - strand, within MPMX26_01267 at 1340.768 kb on - strand, within MPMX26_01267 at 1340.768 kb on - strand, within MPMX26_01267 at 1340.768 kb on - strand, within MPMX26_01267 at 1340.768 kb on - strand, within MPMX26_01267 at 1340.768 kb on - strand, within MPMX26_01267 at 1340.768 kb on - strand, within MPMX26_01267 at 1340.768 kb on - strand, within MPMX26_01267 at 1340.768 kb on - strand, within MPMX26_01267 at 1340.768 kb on - strand, within MPMX26_01267 at 1340.768 kb on - strand, within MPMX26_01267 at 1340.768 kb on - strand, within MPMX26_01267 at 1340.768 kb on - strand, within MPMX26_01267 at 1340.768 kb on - strand, within MPMX26_01267 at 1340.768 kb on - strand, within MPMX26_01267 at 1340.768 kb on - strand, within MPMX26_01267 at 1340.768 kb on - strand, within MPMX26_01267 at 1340.798 kb on - strand, within MPMX26_01267 at 1340.800 kb on - strand, within MPMX26_01267 at 1340.825 kb on - strand, within MPMX26_01267
Per-strain Table
Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 10 seconds remove 1,339,822 + MPMX26_01266 0.34 -0.7 1,339,849 + MPMX26_01266 0.42 +0.2 1,339,849 + MPMX26_01266 0.42 -0.2 1,339,954 + MPMX26_01266 0.73 -0.4 1,339,959 + MPMX26_01266 0.75 -0.4 1,340,007 + MPMX26_01266 0.89 -1.2 1,340,013 + -1.0 1,340,441 - MPMX26_01267 0.41 +0.3 1,340,475 - MPMX26_01267 0.45 +0.0 1,340,534 - MPMX26_01267 0.51 +0.8 1,340,690 - MPMX26_01267 0.68 -1.1 1,340,715 - MPMX26_01267 0.70 +0.6 1,340,753 - MPMX26_01267 0.74 +0.4 1,340,768 - MPMX26_01267 0.76 -1.5 1,340,768 - MPMX26_01267 0.76 -1.0 1,340,768 - MPMX26_01267 0.76 +1.2 1,340,768 - MPMX26_01267 0.76 -1.0 1,340,768 - MPMX26_01267 0.76 -0.2 1,340,768 - MPMX26_01267 0.76 +0.6 1,340,768 - MPMX26_01267 0.76 -0.2 1,340,768 - MPMX26_01267 0.76 +0.0 1,340,768 - MPMX26_01267 0.76 +0.2 1,340,768 - MPMX26_01267 0.76 +0.4 1,340,768 - MPMX26_01267 0.76 +0.1 1,340,768 - MPMX26_01267 0.76 -1.4 1,340,768 - MPMX26_01267 0.76 +2.6 1,340,768 - MPMX26_01267 0.76 +0.3 1,340,768 - MPMX26_01267 0.76 +1.4 1,340,768 - MPMX26_01267 0.76 +0.9 1,340,768 - MPMX26_01267 0.76 +0.2 1,340,798 - MPMX26_01267 0.79 +0.1 1,340,800 - MPMX26_01267 0.79 +0.3 1,340,825 - MPMX26_01267 0.82 -0.1
Or see this region's nucleotide sequence