Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01164

Experiment: UV exposure at 150J/m2 for 10 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01163 and MPMX26_01164 are separated by 630 nucleotidesMPMX26_01164 and MPMX26_01165 are separated by 462 nucleotidesMPMX26_01165 and MPMX26_01166 are separated by 216 nucleotides MPMX26_01163: MPMX26_01163 - hypothetical protein, at 1,229,883 to 1,230,650 _01163 MPMX26_01164: MPMX26_01164 - hypothetical protein, at 1,231,281 to 1,231,769 _01164 MPMX26_01165: MPMX26_01165 - hypothetical protein, at 1,232,232 to 1,232,489 _01165 MPMX26_01166: MPMX26_01166 - Phosphoenolpyruvate synthase, at 1,232,706 to 1,235,084 _01166 Position (kb) 1231 1232Strain fitness (log2 ratio) -2 -1 0 1at 1230.326 kb on - strand, within MPMX26_01163at 1230.327 kb on - strand, within MPMX26_01163at 1230.327 kb on - strand, within MPMX26_01163at 1230.327 kb on - strand, within MPMX26_01163at 1230.327 kb on - strand, within MPMX26_01163at 1230.327 kb on - strand, within MPMX26_01163at 1230.465 kb on - strand, within MPMX26_01163at 1230.465 kb on - strand, within MPMX26_01163at 1230.473 kb on - strand, within MPMX26_01163at 1230.536 kb on - strand, within MPMX26_01163at 1230.543 kb on - strand, within MPMX26_01163at 1230.554 kb on - strand, within MPMX26_01163at 1230.554 kb on - strand, within MPMX26_01163at 1230.590 kb on - strandat 1230.609 kb on - strandat 1230.612 kb on - strandat 1230.612 kb on - strandat 1230.612 kb on - strandat 1230.612 kb on - strandat 1230.614 kb on - strandat 1230.614 kb on - strandat 1230.614 kb on - strandat 1231.277 kb on - strandat 1231.277 kb on - strandat 1231.286 kb on - strandat 1231.368 kb on - strand, within MPMX26_01164at 1231.376 kb on - strand, within MPMX26_01164at 1231.403 kb on - strand, within MPMX26_01164at 1231.403 kb on - strand, within MPMX26_01164at 1231.456 kb on - strand, within MPMX26_01164at 1231.456 kb on - strand, within MPMX26_01164at 1231.456 kb on - strand, within MPMX26_01164at 1231.466 kb on - strand, within MPMX26_01164at 1231.501 kb on - strand, within MPMX26_01164at 1231.511 kb on - strand, within MPMX26_01164at 1231.511 kb on - strand, within MPMX26_01164at 1231.511 kb on - strand, within MPMX26_01164at 1231.511 kb on - strand, within MPMX26_01164at 1231.527 kb on - strand, within MPMX26_01164at 1231.527 kb on - strand, within MPMX26_01164at 1231.527 kb on - strand, within MPMX26_01164at 1231.527 kb on - strand, within MPMX26_01164at 1231.527 kb on - strand, within MPMX26_01164at 1231.598 kb on - strand, within MPMX26_01164at 1231.598 kb on - strand, within MPMX26_01164at 1231.614 kb on - strand, within MPMX26_01164at 1231.642 kb on - strand, within MPMX26_01164at 1231.642 kb on - strand, within MPMX26_01164at 1231.674 kb on - strand, within MPMX26_01164at 1231.674 kb on - strand, within MPMX26_01164at 1231.679 kb on - strand, within MPMX26_01164at 1231.679 kb on - strand, within MPMX26_01164at 1231.684 kb on - strand, within MPMX26_01164at 1231.686 kb on - strand, within MPMX26_01164at 1231.696 kb on - strand, within MPMX26_01164at 1231.698 kb on - strand, within MPMX26_01164at 1231.698 kb on - strand, within MPMX26_01164at 1231.698 kb on - strand, within MPMX26_01164at 1231.698 kb on - strand, within MPMX26_01164at 1231.698 kb on - strand, within MPMX26_01164at 1231.698 kb on - strand, within MPMX26_01164at 1231.698 kb on - strand, within MPMX26_01164at 1231.698 kb on - strand, within MPMX26_01164at 1231.698 kb on - strand, within MPMX26_01164at 1231.710 kb on - strand, within MPMX26_01164at 1231.710 kb on - strand, within MPMX26_01164at 1231.710 kb on - strand, within MPMX26_01164at 1231.717 kb on - strand, within MPMX26_01164at 1231.728 kb on - strandat 1232.081 kb on + strandat 1232.181 kb on + strandat 1232.263 kb on + strand, within MPMX26_01165at 1232.263 kb on + strand, within MPMX26_01165at 1232.279 kb on + strand, within MPMX26_01165at 1232.281 kb on + strand, within MPMX26_01165at 1232.304 kb on + strand, within MPMX26_01165at 1232.384 kb on + strand, within MPMX26_01165at 1232.475 kb on + strandat 1232.589 kb on + strandat 1232.645 kb on + strandat 1232.645 kb on + strandat 1232.645 kb on + strandat 1232.645 kb on + strandat 1232.645 kb on + strandat 1232.747 kb on - strandat 1232.756 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 10 seconds
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1,230,326 - MPMX26_01163 0.58 -0.5
1,230,327 - MPMX26_01163 0.58 -0.9
1,230,327 - MPMX26_01163 0.58 -1.8
1,230,327 - MPMX26_01163 0.58 +0.1
1,230,327 - MPMX26_01163 0.58 +0.6
1,230,327 - MPMX26_01163 0.58 +0.6
1,230,465 - MPMX26_01163 0.76 +0.1
1,230,465 - MPMX26_01163 0.76 +0.1
1,230,473 - MPMX26_01163 0.77 -1.1
1,230,536 - MPMX26_01163 0.85 -0.1
1,230,543 - MPMX26_01163 0.86 -0.0
1,230,554 - MPMX26_01163 0.87 +0.5
1,230,554 - MPMX26_01163 0.87 -0.0
1,230,590 - +0.2
1,230,609 - +0.2
1,230,612 - -0.2
1,230,612 - -0.5
1,230,612 - -1.3
1,230,612 - +0.3
1,230,614 - -0.7
1,230,614 - -0.2
1,230,614 - -0.4
1,231,277 - -0.0
1,231,277 - +0.3
1,231,286 - +0.6
1,231,368 - MPMX26_01164 0.18 +0.1
1,231,376 - MPMX26_01164 0.19 +0.5
1,231,403 - MPMX26_01164 0.25 +0.6
1,231,403 - MPMX26_01164 0.25 +0.7
1,231,456 - MPMX26_01164 0.36 +0.0
1,231,456 - MPMX26_01164 0.36 -0.4
1,231,456 - MPMX26_01164 0.36 -0.3
1,231,466 - MPMX26_01164 0.38 -0.7
1,231,501 - MPMX26_01164 0.45 -0.4
1,231,511 - MPMX26_01164 0.47 +0.4
1,231,511 - MPMX26_01164 0.47 -0.3
1,231,511 - MPMX26_01164 0.47 +0.1
1,231,511 - MPMX26_01164 0.47 +0.0
1,231,527 - MPMX26_01164 0.50 +0.2
1,231,527 - MPMX26_01164 0.50 +0.2
1,231,527 - MPMX26_01164 0.50 +0.7
1,231,527 - MPMX26_01164 0.50 -0.2
1,231,527 - MPMX26_01164 0.50 +1.2
1,231,598 - MPMX26_01164 0.65 +0.2
1,231,598 - MPMX26_01164 0.65 -0.4
1,231,614 - MPMX26_01164 0.68 -0.3
1,231,642 - MPMX26_01164 0.74 +0.9
1,231,642 - MPMX26_01164 0.74 +0.1
1,231,674 - MPMX26_01164 0.80 -0.2
1,231,674 - MPMX26_01164 0.80 +0.1
1,231,679 - MPMX26_01164 0.81 -0.6
1,231,679 - MPMX26_01164 0.81 +0.2
1,231,684 - MPMX26_01164 0.82 -0.7
1,231,686 - MPMX26_01164 0.83 -0.3
1,231,696 - MPMX26_01164 0.85 -0.5
1,231,698 - MPMX26_01164 0.85 +0.2
1,231,698 - MPMX26_01164 0.85 +0.4
1,231,698 - MPMX26_01164 0.85 +0.6
1,231,698 - MPMX26_01164 0.85 -0.2
1,231,698 - MPMX26_01164 0.85 +0.1
1,231,698 - MPMX26_01164 0.85 +0.2
1,231,698 - MPMX26_01164 0.85 +0.2
1,231,698 - MPMX26_01164 0.85 -0.3
1,231,698 - MPMX26_01164 0.85 -1.0
1,231,710 - MPMX26_01164 0.88 -0.3
1,231,710 - MPMX26_01164 0.88 +0.4
1,231,710 - MPMX26_01164 0.88 -0.4
1,231,717 - MPMX26_01164 0.89 -0.6
1,231,728 - +0.3
1,232,081 + -1.1
1,232,181 + +0.0
1,232,263 + MPMX26_01165 0.12 -0.0
1,232,263 + MPMX26_01165 0.12 +0.7
1,232,279 + MPMX26_01165 0.18 +0.2
1,232,281 + MPMX26_01165 0.19 +0.1
1,232,304 + MPMX26_01165 0.28 -0.2
1,232,384 + MPMX26_01165 0.59 +0.1
1,232,475 + +0.6
1,232,589 + +0.6
1,232,645 + +0.4
1,232,645 + -0.1
1,232,645 + -0.4
1,232,645 + +0.3
1,232,645 + +0.4
1,232,747 - -0.7
1,232,756 - +0.1

Or see this region's nucleotide sequence