Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00072

Experiment: UV exposure at 150J/m2 for 10 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00070 and MPMX26_00071 are separated by 18 nucleotidesMPMX26_00071 and MPMX26_00072 are separated by 201 nucleotidesMPMX26_00072 and MPMX26_00073 are separated by 394 nucleotides MPMX26_00070: MPMX26_00070 - DNA-binding transcriptional regulator BolA, at 76,640 to 76,948 _00070 MPMX26_00071: MPMX26_00071 - hypothetical protein, at 76,967 to 77,356 _00071 MPMX26_00072: MPMX26_00072 - hypothetical protein, at 77,558 to 77,950 _00072 MPMX26_00073: MPMX26_00073 - Protein DedA, at 78,345 to 78,995 _00073 Position (kb) 77 78Strain fitness (log2 ratio) -2 -1 0 1 2at 76.594 kb on + strandat 76.602 kb on + strandat 76.634 kb on + strandat 76.644 kb on + strandat 76.644 kb on + strandat 76.644 kb on + strandat 76.652 kb on - strandat 76.652 kb on - strandat 76.713 kb on + strand, within MPMX26_00070at 76.743 kb on + strand, within MPMX26_00070at 76.777 kb on + strand, within MPMX26_00070at 76.777 kb on + strand, within MPMX26_00070at 76.835 kb on + strand, within MPMX26_00070at 76.850 kb on + strand, within MPMX26_00070at 76.856 kb on + strand, within MPMX26_00070at 76.856 kb on + strand, within MPMX26_00070at 76.864 kb on - strand, within MPMX26_00070at 76.917 kb on + strand, within MPMX26_00070at 76.976 kb on + strandat 76.997 kb on + strandat 76.997 kb on + strandat 76.997 kb on + strandat 77.002 kb on + strandat 77.007 kb on + strand, within MPMX26_00071at 77.007 kb on + strand, within MPMX26_00071at 77.007 kb on + strand, within MPMX26_00071at 77.007 kb on + strand, within MPMX26_00071at 77.033 kb on + strand, within MPMX26_00071at 77.061 kb on + strand, within MPMX26_00071at 77.076 kb on + strand, within MPMX26_00071at 77.077 kb on + strand, within MPMX26_00071at 77.104 kb on + strand, within MPMX26_00071at 77.111 kb on + strand, within MPMX26_00071at 77.111 kb on + strand, within MPMX26_00071at 77.111 kb on + strand, within MPMX26_00071at 77.111 kb on + strand, within MPMX26_00071at 77.111 kb on + strand, within MPMX26_00071at 77.111 kb on + strand, within MPMX26_00071at 77.111 kb on + strand, within MPMX26_00071at 77.111 kb on + strand, within MPMX26_00071at 77.111 kb on + strand, within MPMX26_00071at 77.112 kb on - strand, within MPMX26_00071at 77.112 kb on - strand, within MPMX26_00071at 77.117 kb on + strand, within MPMX26_00071at 77.117 kb on + strand, within MPMX26_00071at 77.119 kb on - strand, within MPMX26_00071at 77.119 kb on - strand, within MPMX26_00071at 77.119 kb on - strand, within MPMX26_00071at 77.119 kb on - strand, within MPMX26_00071at 77.124 kb on + strand, within MPMX26_00071at 77.124 kb on + strand, within MPMX26_00071at 77.124 kb on + strand, within MPMX26_00071at 77.173 kb on + strand, within MPMX26_00071at 77.185 kb on + strand, within MPMX26_00071at 77.185 kb on + strand, within MPMX26_00071at 77.185 kb on + strand, within MPMX26_00071at 77.185 kb on + strand, within MPMX26_00071at 77.212 kb on + strand, within MPMX26_00071at 77.224 kb on + strand, within MPMX26_00071at 77.236 kb on + strand, within MPMX26_00071at 77.236 kb on + strand, within MPMX26_00071at 77.268 kb on + strand, within MPMX26_00071at 77.268 kb on + strand, within MPMX26_00071at 77.268 kb on + strand, within MPMX26_00071at 77.273 kb on + strand, within MPMX26_00071at 77.278 kb on + strand, within MPMX26_00071at 77.278 kb on + strand, within MPMX26_00071at 77.337 kb on + strandat 77.344 kb on + strandat 77.344 kb on + strandat 77.392 kb on - strandat 77.402 kb on + strandat 77.402 kb on + strandat 77.402 kb on + strandat 77.403 kb on + strandat 77.452 kb on + strandat 77.587 kb on + strandat 77.613 kb on + strand, within MPMX26_00072at 77.613 kb on + strand, within MPMX26_00072at 77.613 kb on + strand, within MPMX26_00072at 77.622 kb on + strand, within MPMX26_00072at 77.630 kb on - strand, within MPMX26_00072at 77.651 kb on + strand, within MPMX26_00072at 77.687 kb on + strand, within MPMX26_00072at 77.687 kb on + strand, within MPMX26_00072at 77.687 kb on + strand, within MPMX26_00072at 77.709 kb on + strand, within MPMX26_00072at 77.709 kb on + strand, within MPMX26_00072at 77.709 kb on + strand, within MPMX26_00072at 77.709 kb on + strand, within MPMX26_00072at 77.719 kb on + strand, within MPMX26_00072at 77.719 kb on + strand, within MPMX26_00072at 77.719 kb on + strand, within MPMX26_00072at 77.719 kb on + strand, within MPMX26_00072at 77.737 kb on + strand, within MPMX26_00072at 77.744 kb on + strand, within MPMX26_00072at 77.744 kb on + strand, within MPMX26_00072at 77.744 kb on + strand, within MPMX26_00072at 77.744 kb on + strand, within MPMX26_00072at 77.744 kb on + strand, within MPMX26_00072at 77.744 kb on + strand, within MPMX26_00072at 77.750 kb on + strand, within MPMX26_00072at 77.774 kb on + strand, within MPMX26_00072at 77.774 kb on + strand, within MPMX26_00072at 77.774 kb on + strand, within MPMX26_00072at 77.774 kb on + strand, within MPMX26_00072at 77.774 kb on + strand, within MPMX26_00072at 77.823 kb on + strand, within MPMX26_00072at 77.831 kb on - strand, within MPMX26_00072at 77.833 kb on + strand, within MPMX26_00072at 77.851 kb on + strand, within MPMX26_00072at 77.920 kb on + strandat 77.929 kb on + strandat 77.929 kb on + strandat 77.929 kb on + strandat 77.929 kb on + strandat 78.009 kb on - strandat 78.011 kb on + strandat 78.126 kb on + strandat 78.321 kb on - strandat 78.321 kb on - strandat 78.321 kb on - strandat 78.341 kb on - strandat 78.483 kb on - strand, within MPMX26_00073at 78.492 kb on - strand, within MPMX26_00073at 78.497 kb on - strand, within MPMX26_00073at 78.585 kb on - strand, within MPMX26_00073at 78.585 kb on - strand, within MPMX26_00073at 78.593 kb on - strand, within MPMX26_00073at 78.632 kb on - strand, within MPMX26_00073at 78.664 kb on + strand, within MPMX26_00073at 78.672 kb on - strand, within MPMX26_00073at 78.672 kb on - strand, within MPMX26_00073at 78.672 kb on - strand, within MPMX26_00073at 78.672 kb on - strand, within MPMX26_00073at 78.672 kb on - strand, within MPMX26_00073at 78.672 kb on - strand, within MPMX26_00073at 78.672 kb on - strand, within MPMX26_00073at 78.672 kb on - strand, within MPMX26_00073at 78.672 kb on - strand, within MPMX26_00073at 78.759 kb on - strand, within MPMX26_00073at 78.764 kb on - strand, within MPMX26_00073at 78.764 kb on - strand, within MPMX26_00073at 78.764 kb on - strand, within MPMX26_00073at 78.764 kb on - strand, within MPMX26_00073at 78.764 kb on - strand, within MPMX26_00073at 78.767 kb on - strand, within MPMX26_00073at 78.769 kb on - strand, within MPMX26_00073at 78.769 kb on - strand, within MPMX26_00073at 78.769 kb on - strand, within MPMX26_00073at 78.769 kb on - strand, within MPMX26_00073at 78.769 kb on - strand, within MPMX26_00073at 78.769 kb on - strand, within MPMX26_00073at 78.769 kb on - strand, within MPMX26_00073at 78.777 kb on - strand, within MPMX26_00073at 78.777 kb on - strand, within MPMX26_00073at 78.792 kb on - strand, within MPMX26_00073at 78.799 kb on - strand, within MPMX26_00073at 78.802 kb on - strand, within MPMX26_00073at 78.802 kb on - strand, within MPMX26_00073at 78.857 kb on - strand, within MPMX26_00073at 78.889 kb on - strand, within MPMX26_00073

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 10 seconds
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76,594 + +0.1
76,602 + -0.5
76,634 + +0.5
76,644 + -0.1
76,644 + +1.3
76,644 + +0.5
76,652 - -0.3
76,652 - +0.3
76,713 + MPMX26_00070 0.24 +0.7
76,743 + MPMX26_00070 0.33 -0.0
76,777 + MPMX26_00070 0.44 -0.3
76,777 + MPMX26_00070 0.44 +0.2
76,835 + MPMX26_00070 0.63 -0.6
76,850 + MPMX26_00070 0.68 -0.5
76,856 + MPMX26_00070 0.70 +0.1
76,856 + MPMX26_00070 0.70 -0.2
76,864 - MPMX26_00070 0.72 -1.5
76,917 + MPMX26_00070 0.90 +0.8
76,976 + -0.8
76,997 + +0.2
76,997 + +0.1
76,997 + +0.0
77,002 + -0.8
77,007 + MPMX26_00071 0.10 +0.3
77,007 + MPMX26_00071 0.10 -0.3
77,007 + MPMX26_00071 0.10 +1.0
77,007 + MPMX26_00071 0.10 -0.1
77,033 + MPMX26_00071 0.17 +0.0
77,061 + MPMX26_00071 0.24 -0.3
77,076 + MPMX26_00071 0.28 +1.3
77,077 + MPMX26_00071 0.28 +0.1
77,104 + MPMX26_00071 0.35 -0.0
77,111 + MPMX26_00071 0.37 +0.6
77,111 + MPMX26_00071 0.37 +0.1
77,111 + MPMX26_00071 0.37 -0.0
77,111 + MPMX26_00071 0.37 +0.5
77,111 + MPMX26_00071 0.37 -2.2
77,111 + MPMX26_00071 0.37 -0.3
77,111 + MPMX26_00071 0.37 +0.7
77,111 + MPMX26_00071 0.37 +0.6
77,111 + MPMX26_00071 0.37 -0.3
77,112 - MPMX26_00071 0.37 +0.1
77,112 - MPMX26_00071 0.37 -0.0
77,117 + MPMX26_00071 0.38 -0.1
77,117 + MPMX26_00071 0.38 +0.5
77,119 - MPMX26_00071 0.39 -0.3
77,119 - MPMX26_00071 0.39 +1.1
77,119 - MPMX26_00071 0.39 +0.4
77,119 - MPMX26_00071 0.39 +0.8
77,124 + MPMX26_00071 0.40 +0.4
77,124 + MPMX26_00071 0.40 +0.2
77,124 + MPMX26_00071 0.40 -0.0
77,173 + MPMX26_00071 0.53 +0.1
77,185 + MPMX26_00071 0.56 +0.1
77,185 + MPMX26_00071 0.56 -0.4
77,185 + MPMX26_00071 0.56 -0.0
77,185 + MPMX26_00071 0.56 +0.0
77,212 + MPMX26_00071 0.63 -0.6
77,224 + MPMX26_00071 0.66 -0.4
77,236 + MPMX26_00071 0.69 -0.5
77,236 + MPMX26_00071 0.69 +0.1
77,268 + MPMX26_00071 0.77 -0.7
77,268 + MPMX26_00071 0.77 +0.4
77,268 + MPMX26_00071 0.77 -2.1
77,273 + MPMX26_00071 0.78 +0.0
77,278 + MPMX26_00071 0.80 +0.2
77,278 + MPMX26_00071 0.80 +2.3
77,337 + -0.3
77,344 + +0.1
77,344 + -0.0
77,392 - +0.2
77,402 + +0.8
77,402 + +0.3
77,402 + +0.3
77,403 + -1.0
77,452 + -0.0
77,587 + +0.5
77,613 + MPMX26_00072 0.14 +0.6
77,613 + MPMX26_00072 0.14 +0.3
77,613 + MPMX26_00072 0.14 +0.4
77,622 + MPMX26_00072 0.16 -0.1
77,630 - MPMX26_00072 0.18 +0.1
77,651 + MPMX26_00072 0.24 +0.2
77,687 + MPMX26_00072 0.33 -0.7
77,687 + MPMX26_00072 0.33 +0.2
77,687 + MPMX26_00072 0.33 +0.1
77,709 + MPMX26_00072 0.38 -1.6
77,709 + MPMX26_00072 0.38 +0.5
77,709 + MPMX26_00072 0.38 +0.5
77,709 + MPMX26_00072 0.38 -0.5
77,719 + MPMX26_00072 0.41 +0.6
77,719 + MPMX26_00072 0.41 +0.2
77,719 + MPMX26_00072 0.41 +0.7
77,719 + MPMX26_00072 0.41 +0.3
77,737 + MPMX26_00072 0.46 -0.4
77,744 + MPMX26_00072 0.47 +0.7
77,744 + MPMX26_00072 0.47 -0.1
77,744 + MPMX26_00072 0.47 +0.0
77,744 + MPMX26_00072 0.47 +0.8
77,744 + MPMX26_00072 0.47 -0.3
77,744 + MPMX26_00072 0.47 +0.0
77,750 + MPMX26_00072 0.49 +0.4
77,774 + MPMX26_00072 0.55 +0.1
77,774 + MPMX26_00072 0.55 +0.0
77,774 + MPMX26_00072 0.55 -0.3
77,774 + MPMX26_00072 0.55 +0.4
77,774 + MPMX26_00072 0.55 +0.5
77,823 + MPMX26_00072 0.67 +0.9
77,831 - MPMX26_00072 0.69 -0.6
77,833 + MPMX26_00072 0.70 +2.7
77,851 + MPMX26_00072 0.75 +0.3
77,920 + -0.1
77,929 + +0.0
77,929 + -0.0
77,929 + -0.4
77,929 + -0.1
78,009 - +0.3
78,011 + +0.5
78,126 + -0.6
78,321 - -0.1
78,321 - +0.5
78,321 - +0.4
78,341 - +0.4
78,483 - MPMX26_00073 0.21 -0.2
78,492 - MPMX26_00073 0.23 +0.1
78,497 - MPMX26_00073 0.23 -0.4
78,585 - MPMX26_00073 0.37 +0.3
78,585 - MPMX26_00073 0.37 -0.7
78,593 - MPMX26_00073 0.38 -0.6
78,632 - MPMX26_00073 0.44 +0.0
78,664 + MPMX26_00073 0.49 +0.3
78,672 - MPMX26_00073 0.50 -0.1
78,672 - MPMX26_00073 0.50 -0.6
78,672 - MPMX26_00073 0.50 +0.5
78,672 - MPMX26_00073 0.50 +0.3
78,672 - MPMX26_00073 0.50 -0.8
78,672 - MPMX26_00073 0.50 -0.7
78,672 - MPMX26_00073 0.50 -0.5
78,672 - MPMX26_00073 0.50 +0.5
78,672 - MPMX26_00073 0.50 -0.5
78,759 - MPMX26_00073 0.64 -0.1
78,764 - MPMX26_00073 0.64 -0.3
78,764 - MPMX26_00073 0.64 -0.0
78,764 - MPMX26_00073 0.64 -0.1
78,764 - MPMX26_00073 0.64 +0.5
78,764 - MPMX26_00073 0.64 -0.2
78,767 - MPMX26_00073 0.65 +0.2
78,769 - MPMX26_00073 0.65 -0.5
78,769 - MPMX26_00073 0.65 -0.0
78,769 - MPMX26_00073 0.65 -0.6
78,769 - MPMX26_00073 0.65 -0.3
78,769 - MPMX26_00073 0.65 +0.3
78,769 - MPMX26_00073 0.65 -0.1
78,769 - MPMX26_00073 0.65 +0.1
78,777 - MPMX26_00073 0.66 +0.2
78,777 - MPMX26_00073 0.66 -0.6
78,792 - MPMX26_00073 0.69 -0.3
78,799 - MPMX26_00073 0.70 +0.6
78,802 - MPMX26_00073 0.70 -0.4
78,802 - MPMX26_00073 0.70 +0.3
78,857 - MPMX26_00073 0.79 -0.7
78,889 - MPMX26_00073 0.84 -0.3

Or see this region's nucleotide sequence