Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03124

Experiment: no UV control

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_03123 and MPMX26_03124 are separated by 469 nucleotidesMPMX26_03124 and MPMX26_03125 are separated by 625 nucleotides MPMX26_03123: MPMX26_03123 - hypothetical protein, at 35,697 to 36,578 _03123 MPMX26_03124: MPMX26_03124 - hypothetical protein, at 37,048 to 37,242 _03124 MPMX26_03125: MPMX26_03125 - Thiol:disulfide interchange protein DsbA, at 37,868 to 38,482 _03125 Position (kb) 37 38Strain fitness (log2 ratio) -2 -1 0 1at 37.071 kb on + strand, within MPMX26_03124at 37.188 kb on + strand, within MPMX26_03124at 37.205 kb on + strand, within MPMX26_03124at 37.207 kb on + strand, within MPMX26_03124at 37.231 kb on + strandat 37.495 kb on + strandat 37.934 kb on - strand, within MPMX26_03125at 37.934 kb on - strand, within MPMX26_03125at 37.934 kb on - strand, within MPMX26_03125at 37.934 kb on - strand, within MPMX26_03125at 37.934 kb on - strand, within MPMX26_03125at 37.934 kb on - strand, within MPMX26_03125at 37.934 kb on - strand, within MPMX26_03125at 37.934 kb on - strand, within MPMX26_03125at 37.944 kb on - strand, within MPMX26_03125at 37.982 kb on - strand, within MPMX26_03125at 37.982 kb on - strand, within MPMX26_03125at 37.982 kb on - strand, within MPMX26_03125at 37.982 kb on - strand, within MPMX26_03125at 37.982 kb on - strand, within MPMX26_03125at 37.993 kb on - strand, within MPMX26_03125at 38.090 kb on - strand, within MPMX26_03125at 38.090 kb on - strand, within MPMX26_03125at 38.090 kb on - strand, within MPMX26_03125at 38.090 kb on - strand, within MPMX26_03125at 38.090 kb on - strand, within MPMX26_03125at 38.090 kb on - strand, within MPMX26_03125at 38.090 kb on - strand, within MPMX26_03125at 38.182 kb on - strand, within MPMX26_03125at 38.189 kb on - strand, within MPMX26_03125at 38.221 kb on - strand, within MPMX26_03125at 38.227 kb on - strand, within MPMX26_03125

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction no UV control
remove
37,071 + MPMX26_03124 0.12 -1.9
37,188 + MPMX26_03124 0.72 -0.3
37,205 + MPMX26_03124 0.81 -0.9
37,207 + MPMX26_03124 0.82 -0.5
37,231 + +0.6
37,495 + -0.0
37,934 - MPMX26_03125 0.11 +0.9
37,934 - MPMX26_03125 0.11 +0.1
37,934 - MPMX26_03125 0.11 +0.1
37,934 - MPMX26_03125 0.11 -0.4
37,934 - MPMX26_03125 0.11 +0.8
37,934 - MPMX26_03125 0.11 -1.4
37,934 - MPMX26_03125 0.11 -0.2
37,934 - MPMX26_03125 0.11 -0.1
37,944 - MPMX26_03125 0.12 +0.2
37,982 - MPMX26_03125 0.19 +0.2
37,982 - MPMX26_03125 0.19 +0.5
37,982 - MPMX26_03125 0.19 -0.2
37,982 - MPMX26_03125 0.19 +0.5
37,982 - MPMX26_03125 0.19 -0.6
37,993 - MPMX26_03125 0.20 -0.5
38,090 - MPMX26_03125 0.36 +1.0
38,090 - MPMX26_03125 0.36 +0.1
38,090 - MPMX26_03125 0.36 -0.4
38,090 - MPMX26_03125 0.36 -0.6
38,090 - MPMX26_03125 0.36 -0.2
38,090 - MPMX26_03125 0.36 +0.0
38,090 - MPMX26_03125 0.36 -0.7
38,182 - MPMX26_03125 0.51 +0.3
38,189 - MPMX26_03125 0.52 +1.0
38,221 - MPMX26_03125 0.57 -0.1
38,227 - MPMX26_03125 0.58 +0.1

Or see this region's nucleotide sequence