Experiment: no UV control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_03067 and MPMX26_03068 are separated by 52 nucleotides MPMX26_03068 and MPMX26_03069 are separated by 175 nucleotides
MPMX26_03067: MPMX26_03067 - Cadmium, cobalt and zinc/H(+)-K(+) antiporter, at 3,189,630 to 3,190,601
_03067
MPMX26_03068: MPMX26_03068 - Transcriptional repressor RcnR, at 3,190,654 to 3,190,917
_03068
MPMX26_03069: MPMX26_03069 - hypothetical protein, at 3,191,093 to 3,192,235
_03069
Position (kb)
3190
3191 Strain fitness (log2 ratio)
-2
-1
0
1 at 3189.714 kb on - strand at 3189.714 kb on - strand at 3189.890 kb on - strand, within MPMX26_03067 at 3189.920 kb on - strand, within MPMX26_03067 at 3189.939 kb on - strand, within MPMX26_03067 at 3190.148 kb on - strand, within MPMX26_03067 at 3190.461 kb on - strand, within MPMX26_03067 at 3190.514 kb on - strand at 3190.522 kb on - strand at 3190.522 kb on - strand at 3190.546 kb on + strand at 3190.554 kb on - strand at 3190.701 kb on + strand, within MPMX26_03068 at 3190.701 kb on + strand, within MPMX26_03068 at 3190.713 kb on + strand, within MPMX26_03068 at 3190.713 kb on + strand, within MPMX26_03068 at 3190.713 kb on + strand, within MPMX26_03068 at 3190.732 kb on + strand, within MPMX26_03068 at 3190.765 kb on + strand, within MPMX26_03068 at 3190.783 kb on + strand, within MPMX26_03068 at 3190.821 kb on + strand, within MPMX26_03068 at 3190.821 kb on + strand, within MPMX26_03068 at 3190.821 kb on + strand, within MPMX26_03068 at 3191.028 kb on + strand at 3191.039 kb on + strand at 3191.100 kb on + strand at 3191.114 kb on + strand at 3191.122 kb on + strand at 3191.216 kb on + strand, within MPMX26_03069 at 3191.226 kb on + strand, within MPMX26_03069 at 3191.285 kb on + strand, within MPMX26_03069 at 3191.390 kb on + strand, within MPMX26_03069 at 3191.395 kb on + strand, within MPMX26_03069 at 3191.395 kb on + strand, within MPMX26_03069 at 3191.395 kb on + strand, within MPMX26_03069 at 3191.395 kb on + strand, within MPMX26_03069 at 3191.395 kb on + strand, within MPMX26_03069 at 3191.395 kb on + strand, within MPMX26_03069 at 3191.395 kb on + strand, within MPMX26_03069 at 3191.459 kb on + strand, within MPMX26_03069 at 3191.498 kb on + strand, within MPMX26_03069 at 3191.840 kb on - strand, within MPMX26_03069 at 3191.864 kb on + strand, within MPMX26_03069
Per-strain Table
Position Strand Gene LocusTag Fraction no UV control remove 3,189,714 - -0.6 3,189,714 - +0.6 3,189,890 - MPMX26_03067 0.27 +1.5 3,189,920 - MPMX26_03067 0.30 +0.2 3,189,939 - MPMX26_03067 0.32 -0.7 3,190,148 - MPMX26_03067 0.53 +1.0 3,190,461 - MPMX26_03067 0.85 +0.7 3,190,514 - -1.1 3,190,522 - -0.1 3,190,522 - -0.2 3,190,546 + +0.5 3,190,554 - +0.3 3,190,701 + MPMX26_03068 0.18 -0.4 3,190,701 + MPMX26_03068 0.18 -0.3 3,190,713 + MPMX26_03068 0.22 -0.3 3,190,713 + MPMX26_03068 0.22 +0.3 3,190,713 + MPMX26_03068 0.22 +0.4 3,190,732 + MPMX26_03068 0.30 +0.2 3,190,765 + MPMX26_03068 0.42 -0.2 3,190,783 + MPMX26_03068 0.49 +0.4 3,190,821 + MPMX26_03068 0.63 +1.0 3,190,821 + MPMX26_03068 0.63 +0.2 3,190,821 + MPMX26_03068 0.63 +1.0 3,191,028 + -0.1 3,191,039 + -0.3 3,191,100 + +0.0 3,191,114 + +0.1 3,191,122 + -0.1 3,191,216 + MPMX26_03069 0.11 -0.1 3,191,226 + MPMX26_03069 0.12 -0.0 3,191,285 + MPMX26_03069 0.17 +0.3 3,191,390 + MPMX26_03069 0.26 +0.8 3,191,395 + MPMX26_03069 0.26 -0.7 3,191,395 + MPMX26_03069 0.26 +0.6 3,191,395 + MPMX26_03069 0.26 +1.5 3,191,395 + MPMX26_03069 0.26 -0.7 3,191,395 + MPMX26_03069 0.26 -2.0 3,191,395 + MPMX26_03069 0.26 +0.5 3,191,395 + MPMX26_03069 0.26 +1.2 3,191,459 + MPMX26_03069 0.32 +0.2 3,191,498 + MPMX26_03069 0.35 +0.0 3,191,840 - MPMX26_03069 0.65 +0.2 3,191,864 + MPMX26_03069 0.67 +0.4
Or see this region's nucleotide sequence