Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03065

Experiment: no UV control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03063 and MPMX26_03064 are separated by 125 nucleotidesMPMX26_03064 and MPMX26_03065 are separated by 206 nucleotidesMPMX26_03065 and MPMX26_03066 are separated by 91 nucleotidesMPMX26_03066 and MPMX26_03067 are separated by 98 nucleotides MPMX26_03062: MPMX26_03062 - Guanine deaminase, at 3,186,181 to 3,187,506 _03062 MPMX26_03063: MPMX26_03063 - hypothetical protein, at 3,187,448 to 3,187,597 _03063 MPMX26_03064: MPMX26_03064 - Hypoxanthine phosphoribosyltransferase, at 3,187,723 to 3,188,250 _03064 MPMX26_03065: MPMX26_03065 - hypothetical protein, at 3,188,457 to 3,188,726 _03065 MPMX26_03066: MPMX26_03066 - putative thiol:disulfide interchange protein DsbC, at 3,188,818 to 3,189,531 _03066 MPMX26_03067: MPMX26_03067 - Cadmium, cobalt and zinc/H(+)-K(+) antiporter, at 3,189,630 to 3,190,601 _03067 Position (kb) 3188 3189Strain fitness (log2 ratio) -2 -1 0 1 2 3at 3187.459 kb on + strandat 3187.459 kb on + strandat 3187.459 kb on + strandat 3187.460 kb on + strandat 3187.480 kb on + strandat 3187.491 kb on + strandat 3187.500 kb on + strandat 3187.501 kb on + strandat 3187.544 kb on + strand, within MPMX26_03063at 3187.544 kb on + strand, within MPMX26_03063at 3187.544 kb on + strand, within MPMX26_03063at 3187.544 kb on + strand, within MPMX26_03063at 3187.544 kb on + strand, within MPMX26_03063at 3187.544 kb on + strand, within MPMX26_03063at 3187.544 kb on + strand, within MPMX26_03063at 3187.544 kb on + strand, within MPMX26_03063at 3187.544 kb on + strand, within MPMX26_03063at 3187.544 kb on + strand, within MPMX26_03063at 3187.544 kb on + strand, within MPMX26_03063at 3187.554 kb on + strand, within MPMX26_03063at 3187.554 kb on + strand, within MPMX26_03063at 3187.554 kb on + strand, within MPMX26_03063at 3187.554 kb on + strand, within MPMX26_03063at 3187.559 kb on + strand, within MPMX26_03063at 3187.564 kb on + strand, within MPMX26_03063at 3187.574 kb on + strand, within MPMX26_03063at 3187.574 kb on + strand, within MPMX26_03063at 3187.579 kb on + strand, within MPMX26_03063at 3187.579 kb on + strand, within MPMX26_03063at 3187.621 kb on + strandat 3187.673 kb on + strandat 3187.673 kb on + strandat 3187.714 kb on + strandat 3187.719 kb on + strandat 3187.719 kb on + strandat 3187.719 kb on + strandat 3187.719 kb on + strandat 3187.727 kb on + strandat 3187.759 kb on - strandat 3187.810 kb on + strand, within MPMX26_03064at 3187.830 kb on + strand, within MPMX26_03064at 3187.831 kb on + strand, within MPMX26_03064at 3187.843 kb on + strand, within MPMX26_03064at 3187.845 kb on + strand, within MPMX26_03064at 3187.873 kb on + strand, within MPMX26_03064at 3187.873 kb on + strand, within MPMX26_03064at 3187.873 kb on + strand, within MPMX26_03064at 3187.873 kb on + strand, within MPMX26_03064at 3187.873 kb on + strand, within MPMX26_03064at 3187.911 kb on + strand, within MPMX26_03064at 3187.911 kb on + strand, within MPMX26_03064at 3187.911 kb on + strand, within MPMX26_03064at 3187.923 kb on + strand, within MPMX26_03064at 3187.923 kb on + strand, within MPMX26_03064at 3187.923 kb on + strand, within MPMX26_03064at 3187.945 kb on + strand, within MPMX26_03064at 3187.945 kb on + strand, within MPMX26_03064at 3187.975 kb on + strand, within MPMX26_03064at 3187.975 kb on + strand, within MPMX26_03064at 3188.003 kb on + strand, within MPMX26_03064at 3188.035 kb on + strand, within MPMX26_03064at 3188.046 kb on + strand, within MPMX26_03064at 3188.046 kb on + strand, within MPMX26_03064at 3188.046 kb on + strand, within MPMX26_03064at 3188.072 kb on + strand, within MPMX26_03064at 3188.094 kb on + strand, within MPMX26_03064at 3188.095 kb on + strand, within MPMX26_03064at 3188.104 kb on + strand, within MPMX26_03064at 3188.106 kb on + strand, within MPMX26_03064at 3188.116 kb on + strand, within MPMX26_03064at 3188.126 kb on + strand, within MPMX26_03064at 3188.191 kb on + strand, within MPMX26_03064at 3188.191 kb on + strand, within MPMX26_03064at 3188.191 kb on + strand, within MPMX26_03064at 3188.268 kb on + strandat 3188.331 kb on - strandat 3188.418 kb on + strandat 3188.526 kb on + strand, within MPMX26_03065at 3188.526 kb on + strand, within MPMX26_03065at 3188.526 kb on + strand, within MPMX26_03065at 3188.526 kb on + strand, within MPMX26_03065at 3188.526 kb on + strand, within MPMX26_03065at 3188.526 kb on + strand, within MPMX26_03065at 3188.526 kb on + strand, within MPMX26_03065at 3188.526 kb on + strand, within MPMX26_03065at 3188.526 kb on + strand, within MPMX26_03065at 3188.526 kb on + strand, within MPMX26_03065at 3188.526 kb on + strand, within MPMX26_03065at 3188.572 kb on + strand, within MPMX26_03065at 3188.575 kb on + strand, within MPMX26_03065at 3188.580 kb on + strand, within MPMX26_03065at 3188.851 kb on - strandat 3188.852 kb on - strandat 3188.875 kb on - strandat 3188.875 kb on - strandat 3188.875 kb on - strandat 3188.910 kb on - strand, within MPMX26_03066at 3188.912 kb on - strand, within MPMX26_03066at 3188.947 kb on - strand, within MPMX26_03066at 3188.947 kb on - strand, within MPMX26_03066at 3188.966 kb on - strand, within MPMX26_03066at 3188.966 kb on - strand, within MPMX26_03066at 3188.966 kb on - strand, within MPMX26_03066at 3188.979 kb on - strand, within MPMX26_03066at 3188.979 kb on - strand, within MPMX26_03066at 3188.979 kb on - strand, within MPMX26_03066at 3188.991 kb on - strand, within MPMX26_03066at 3188.993 kb on - strand, within MPMX26_03066at 3189.014 kb on - strand, within MPMX26_03066at 3189.026 kb on - strand, within MPMX26_03066at 3189.026 kb on - strand, within MPMX26_03066at 3189.029 kb on - strand, within MPMX26_03066at 3189.029 kb on - strand, within MPMX26_03066at 3189.029 kb on - strand, within MPMX26_03066at 3189.029 kb on - strand, within MPMX26_03066at 3189.029 kb on - strand, within MPMX26_03066at 3189.029 kb on - strand, within MPMX26_03066at 3189.029 kb on - strand, within MPMX26_03066at 3189.029 kb on - strand, within MPMX26_03066at 3189.029 kb on - strand, within MPMX26_03066at 3189.029 kb on - strand, within MPMX26_03066at 3189.029 kb on - strand, within MPMX26_03066at 3189.029 kb on - strand, within MPMX26_03066at 3189.029 kb on - strand, within MPMX26_03066at 3189.029 kb on - strand, within MPMX26_03066at 3189.029 kb on - strand, within MPMX26_03066at 3189.038 kb on - strand, within MPMX26_03066at 3189.038 kb on - strand, within MPMX26_03066at 3189.040 kb on - strand, within MPMX26_03066at 3189.041 kb on - strand, within MPMX26_03066at 3189.046 kb on - strand, within MPMX26_03066at 3189.046 kb on - strand, within MPMX26_03066at 3189.046 kb on - strand, within MPMX26_03066at 3189.046 kb on - strand, within MPMX26_03066at 3189.046 kb on - strand, within MPMX26_03066at 3189.046 kb on - strand, within MPMX26_03066at 3189.046 kb on - strand, within MPMX26_03066at 3189.046 kb on - strand, within MPMX26_03066at 3189.079 kb on - strand, within MPMX26_03066at 3189.131 kb on - strand, within MPMX26_03066at 3189.196 kb on - strand, within MPMX26_03066at 3189.196 kb on - strand, within MPMX26_03066at 3189.196 kb on - strand, within MPMX26_03066at 3189.201 kb on - strand, within MPMX26_03066at 3189.201 kb on - strand, within MPMX26_03066at 3189.201 kb on - strand, within MPMX26_03066at 3189.201 kb on - strand, within MPMX26_03066at 3189.201 kb on - strand, within MPMX26_03066at 3189.201 kb on - strand, within MPMX26_03066at 3189.211 kb on - strand, within MPMX26_03066at 3189.211 kb on - strand, within MPMX26_03066at 3189.211 kb on - strand, within MPMX26_03066at 3189.211 kb on - strand, within MPMX26_03066at 3189.211 kb on - strand, within MPMX26_03066at 3189.211 kb on - strand, within MPMX26_03066at 3189.255 kb on - strand, within MPMX26_03066at 3189.288 kb on - strand, within MPMX26_03066at 3189.313 kb on - strand, within MPMX26_03066at 3189.323 kb on - strand, within MPMX26_03066at 3189.363 kb on - strand, within MPMX26_03066at 3189.363 kb on - strand, within MPMX26_03066at 3189.363 kb on - strand, within MPMX26_03066at 3189.363 kb on - strand, within MPMX26_03066at 3189.373 kb on - strand, within MPMX26_03066at 3189.373 kb on - strand, within MPMX26_03066at 3189.373 kb on - strand, within MPMX26_03066at 3189.373 kb on - strand, within MPMX26_03066at 3189.373 kb on - strand, within MPMX26_03066at 3189.373 kb on - strand, within MPMX26_03066at 3189.373 kb on - strand, within MPMX26_03066at 3189.390 kb on - strand, within MPMX26_03066at 3189.394 kb on - strand, within MPMX26_03066at 3189.400 kb on - strand, within MPMX26_03066at 3189.400 kb on - strand, within MPMX26_03066at 3189.427 kb on - strand, within MPMX26_03066at 3189.427 kb on - strand, within MPMX26_03066at 3189.427 kb on - strand, within MPMX26_03066at 3189.427 kb on - strand, within MPMX26_03066at 3189.427 kb on - strand, within MPMX26_03066at 3189.427 kb on - strand, within MPMX26_03066at 3189.427 kb on - strand, within MPMX26_03066at 3189.427 kb on - strand, within MPMX26_03066at 3189.437 kb on - strand, within MPMX26_03066at 3189.447 kb on - strand, within MPMX26_03066at 3189.447 kb on - strand, within MPMX26_03066at 3189.452 kb on - strand, within MPMX26_03066at 3189.457 kb on - strand, within MPMX26_03066at 3189.457 kb on - strand, within MPMX26_03066at 3189.459 kb on - strand, within MPMX26_03066at 3189.478 kb on - strandat 3189.481 kb on - strandat 3189.481 kb on - strandat 3189.490 kb on - strandat 3189.714 kb on - strandat 3189.714 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction no UV control
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3,187,459 + -1.1
3,187,459 + -0.1
3,187,459 + -0.4
3,187,460 + -0.7
3,187,480 + +0.1
3,187,491 + -0.2
3,187,500 + -1.2
3,187,501 + +2.5
3,187,544 + MPMX26_03063 0.64 -1.1
3,187,544 + MPMX26_03063 0.64 +0.1
3,187,544 + MPMX26_03063 0.64 -0.1
3,187,544 + MPMX26_03063 0.64 -0.8
3,187,544 + MPMX26_03063 0.64 -0.1
3,187,544 + MPMX26_03063 0.64 +0.5
3,187,544 + MPMX26_03063 0.64 -1.4
3,187,544 + MPMX26_03063 0.64 +0.9
3,187,544 + MPMX26_03063 0.64 -0.3
3,187,544 + MPMX26_03063 0.64 +1.2
3,187,544 + MPMX26_03063 0.64 +0.5
3,187,554 + MPMX26_03063 0.71 +0.2
3,187,554 + MPMX26_03063 0.71 +1.5
3,187,554 + MPMX26_03063 0.71 -0.5
3,187,554 + MPMX26_03063 0.71 +0.1
3,187,559 + MPMX26_03063 0.74 +0.5
3,187,564 + MPMX26_03063 0.77 +0.2
3,187,574 + MPMX26_03063 0.84 +0.5
3,187,574 + MPMX26_03063 0.84 +1.0
3,187,579 + MPMX26_03063 0.87 +0.8
3,187,579 + MPMX26_03063 0.87 +0.7
3,187,621 + +0.3
3,187,673 + +0.6
3,187,673 + -0.4
3,187,714 + +0.1
3,187,719 + -0.6
3,187,719 + -0.6
3,187,719 + +0.3
3,187,719 + +0.6
3,187,727 + -0.9
3,187,759 - +0.7
3,187,810 + MPMX26_03064 0.16 -0.6
3,187,830 + MPMX26_03064 0.20 -0.4
3,187,831 + MPMX26_03064 0.20 -0.4
3,187,843 + MPMX26_03064 0.23 -0.5
3,187,845 + MPMX26_03064 0.23 +0.1
3,187,873 + MPMX26_03064 0.28 +1.5
3,187,873 + MPMX26_03064 0.28 -0.6
3,187,873 + MPMX26_03064 0.28 +0.6
3,187,873 + MPMX26_03064 0.28 +0.6
3,187,873 + MPMX26_03064 0.28 -0.5
3,187,911 + MPMX26_03064 0.36 -0.3
3,187,911 + MPMX26_03064 0.36 -0.8
3,187,911 + MPMX26_03064 0.36 -0.3
3,187,923 + MPMX26_03064 0.38 -0.5
3,187,923 + MPMX26_03064 0.38 -0.8
3,187,923 + MPMX26_03064 0.38 -0.1
3,187,945 + MPMX26_03064 0.42 -0.8
3,187,945 + MPMX26_03064 0.42 -0.3
3,187,975 + MPMX26_03064 0.48 +0.2
3,187,975 + MPMX26_03064 0.48 -0.7
3,188,003 + MPMX26_03064 0.53 -0.2
3,188,035 + MPMX26_03064 0.59 -0.2
3,188,046 + MPMX26_03064 0.61 -0.6
3,188,046 + MPMX26_03064 0.61 +0.3
3,188,046 + MPMX26_03064 0.61 +1.5
3,188,072 + MPMX26_03064 0.66 +0.4
3,188,094 + MPMX26_03064 0.70 -0.6
3,188,095 + MPMX26_03064 0.70 -0.7
3,188,104 + MPMX26_03064 0.72 -0.4
3,188,106 + MPMX26_03064 0.73 -0.7
3,188,116 + MPMX26_03064 0.74 +1.0
3,188,126 + MPMX26_03064 0.76 -0.0
3,188,191 + MPMX26_03064 0.89 -1.9
3,188,191 + MPMX26_03064 0.89 +0.1
3,188,191 + MPMX26_03064 0.89 +0.0
3,188,268 + +0.8
3,188,331 - -0.3
3,188,418 + -2.1
3,188,526 + MPMX26_03065 0.26 -0.1
3,188,526 + MPMX26_03065 0.26 -1.5
3,188,526 + MPMX26_03065 0.26 -0.7
3,188,526 + MPMX26_03065 0.26 +0.1
3,188,526 + MPMX26_03065 0.26 -1.0
3,188,526 + MPMX26_03065 0.26 +0.9
3,188,526 + MPMX26_03065 0.26 +0.9
3,188,526 + MPMX26_03065 0.26 +0.4
3,188,526 + MPMX26_03065 0.26 -1.0
3,188,526 + MPMX26_03065 0.26 +0.0
3,188,526 + MPMX26_03065 0.26 -0.6
3,188,572 + MPMX26_03065 0.43 +1.6
3,188,575 + MPMX26_03065 0.44 -0.1
3,188,580 + MPMX26_03065 0.46 -0.1
3,188,851 - -0.1
3,188,852 - -0.7
3,188,875 - -0.2
3,188,875 - -0.3
3,188,875 - +0.5
3,188,910 - MPMX26_03066 0.13 -0.7
3,188,912 - MPMX26_03066 0.13 +0.4
3,188,947 - MPMX26_03066 0.18 -0.0
3,188,947 - MPMX26_03066 0.18 -0.0
3,188,966 - MPMX26_03066 0.21 +0.8
3,188,966 - MPMX26_03066 0.21 +0.0
3,188,966 - MPMX26_03066 0.21 +0.3
3,188,979 - MPMX26_03066 0.23 -0.1
3,188,979 - MPMX26_03066 0.23 +3.5
3,188,979 - MPMX26_03066 0.23 +0.7
3,188,991 - MPMX26_03066 0.24 +0.9
3,188,993 - MPMX26_03066 0.25 +1.2
3,189,014 - MPMX26_03066 0.27 +0.0
3,189,026 - MPMX26_03066 0.29 +0.4
3,189,026 - MPMX26_03066 0.29 +1.1
3,189,029 - MPMX26_03066 0.30 -0.8
3,189,029 - MPMX26_03066 0.30 -0.3
3,189,029 - MPMX26_03066 0.30 -0.8
3,189,029 - MPMX26_03066 0.30 -0.1
3,189,029 - MPMX26_03066 0.30 +0.7
3,189,029 - MPMX26_03066 0.30 +0.2
3,189,029 - MPMX26_03066 0.30 +0.2
3,189,029 - MPMX26_03066 0.30 -1.0
3,189,029 - MPMX26_03066 0.30 +0.0
3,189,029 - MPMX26_03066 0.30 +1.5
3,189,029 - MPMX26_03066 0.30 +0.6
3,189,029 - MPMX26_03066 0.30 +2.1
3,189,029 - MPMX26_03066 0.30 -0.9
3,189,029 - MPMX26_03066 0.30 -0.8
3,189,029 - MPMX26_03066 0.30 +0.7
3,189,038 - MPMX26_03066 0.31 +0.2
3,189,038 - MPMX26_03066 0.31 +0.4
3,189,040 - MPMX26_03066 0.31 -0.6
3,189,041 - MPMX26_03066 0.31 +0.0
3,189,046 - MPMX26_03066 0.32 +0.4
3,189,046 - MPMX26_03066 0.32 +0.1
3,189,046 - MPMX26_03066 0.32 +0.2
3,189,046 - MPMX26_03066 0.32 -0.5
3,189,046 - MPMX26_03066 0.32 +1.0
3,189,046 - MPMX26_03066 0.32 +0.3
3,189,046 - MPMX26_03066 0.32 -0.2
3,189,046 - MPMX26_03066 0.32 -0.2
3,189,079 - MPMX26_03066 0.37 +0.4
3,189,131 - MPMX26_03066 0.44 +0.9
3,189,196 - MPMX26_03066 0.53 -0.1
3,189,196 - MPMX26_03066 0.53 +0.9
3,189,196 - MPMX26_03066 0.53 +0.5
3,189,201 - MPMX26_03066 0.54 -0.6
3,189,201 - MPMX26_03066 0.54 +0.2
3,189,201 - MPMX26_03066 0.54 -0.5
3,189,201 - MPMX26_03066 0.54 +0.0
3,189,201 - MPMX26_03066 0.54 -0.0
3,189,201 - MPMX26_03066 0.54 -1.0
3,189,211 - MPMX26_03066 0.55 +0.3
3,189,211 - MPMX26_03066 0.55 -0.5
3,189,211 - MPMX26_03066 0.55 +0.2
3,189,211 - MPMX26_03066 0.55 +0.3
3,189,211 - MPMX26_03066 0.55 +0.9
3,189,211 - MPMX26_03066 0.55 +0.6
3,189,255 - MPMX26_03066 0.61 -0.0
3,189,288 - MPMX26_03066 0.66 +0.1
3,189,313 - MPMX26_03066 0.69 -0.3
3,189,323 - MPMX26_03066 0.71 +1.2
3,189,363 - MPMX26_03066 0.76 -0.0
3,189,363 - MPMX26_03066 0.76 -1.0
3,189,363 - MPMX26_03066 0.76 -0.8
3,189,363 - MPMX26_03066 0.76 -1.1
3,189,373 - MPMX26_03066 0.78 +0.4
3,189,373 - MPMX26_03066 0.78 +0.8
3,189,373 - MPMX26_03066 0.78 +0.4
3,189,373 - MPMX26_03066 0.78 -0.1
3,189,373 - MPMX26_03066 0.78 -1.7
3,189,373 - MPMX26_03066 0.78 +0.4
3,189,373 - MPMX26_03066 0.78 +0.0
3,189,390 - MPMX26_03066 0.80 +0.0
3,189,394 - MPMX26_03066 0.81 -0.3
3,189,400 - MPMX26_03066 0.82 +0.2
3,189,400 - MPMX26_03066 0.82 +0.5
3,189,427 - MPMX26_03066 0.85 +0.3
3,189,427 - MPMX26_03066 0.85 +0.5
3,189,427 - MPMX26_03066 0.85 -0.3
3,189,427 - MPMX26_03066 0.85 +1.6
3,189,427 - MPMX26_03066 0.85 -0.0
3,189,427 - MPMX26_03066 0.85 +0.2
3,189,427 - MPMX26_03066 0.85 -0.2
3,189,427 - MPMX26_03066 0.85 +0.5
3,189,437 - MPMX26_03066 0.87 +0.3
3,189,447 - MPMX26_03066 0.88 +0.4
3,189,447 - MPMX26_03066 0.88 +0.1
3,189,452 - MPMX26_03066 0.89 +0.0
3,189,457 - MPMX26_03066 0.89 -0.2
3,189,457 - MPMX26_03066 0.89 -2.0
3,189,459 - MPMX26_03066 0.90 -0.5
3,189,478 - +0.9
3,189,481 - -0.3
3,189,481 - +0.2
3,189,490 - -0.1
3,189,714 - -0.6
3,189,714 - +0.6

Or see this region's nucleotide sequence