Experiment: no UV control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_03032 and MPMX26_03033 are separated by 836 nucleotides MPMX26_03033 and MPMX26_03034 overlap by 4 nucleotides MPMX26_03034 and MPMX26_03035 are separated by 310 nucleotides
MPMX26_03032: MPMX26_03032 - 16S ribosomal RNA, at 3,150,935 to 3,152,467
_03032
MPMX26_03033: MPMX26_03033 - hypothetical protein, at 3,153,304 to 3,154,155
_03033
MPMX26_03034: MPMX26_03034 - hypothetical protein, at 3,154,152 to 3,154,589
_03034
MPMX26_03035: MPMX26_03035 - hypothetical protein, at 3,154,900 to 3,155,214
_03035
Position (kb)
3153
3154
3155 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3152.667 kb on - strand at 3152.672 kb on - strand at 3152.679 kb on - strand at 3152.679 kb on - strand at 3152.697 kb on - strand at 3152.744 kb on - strand at 3152.745 kb on - strand at 3152.745 kb on - strand at 3153.159 kb on + strand at 3153.201 kb on + strand at 3153.350 kb on + strand at 3153.358 kb on - strand at 3153.358 kb on - strand at 3153.509 kb on - strand, within MPMX26_03033 at 3153.583 kb on + strand, within MPMX26_03033 at 3153.586 kb on - strand, within MPMX26_03033 at 3153.627 kb on - strand, within MPMX26_03033 at 3153.687 kb on - strand, within MPMX26_03033 at 3153.798 kb on + strand, within MPMX26_03033 at 3153.808 kb on - strand, within MPMX26_03033 at 3153.877 kb on - strand, within MPMX26_03033 at 3153.877 kb on - strand, within MPMX26_03033 at 3153.877 kb on - strand, within MPMX26_03033 at 3153.879 kb on - strand, within MPMX26_03033 at 3153.912 kb on - strand, within MPMX26_03033 at 3153.950 kb on + strand, within MPMX26_03033 at 3153.981 kb on - strand, within MPMX26_03033 at 3153.991 kb on - strand, within MPMX26_03033 at 3153.991 kb on - strand, within MPMX26_03033 at 3153.991 kb on - strand, within MPMX26_03033 at 3153.991 kb on - strand, within MPMX26_03033 at 3153.991 kb on - strand, within MPMX26_03033 at 3154.088 kb on + strand at 3154.096 kb on - strand at 3154.096 kb on - strand at 3154.419 kb on - strand, within MPMX26_03034 at 3154.434 kb on - strand, within MPMX26_03034 at 3154.434 kb on - strand, within MPMX26_03034 at 3154.439 kb on - strand, within MPMX26_03034 at 3154.453 kb on - strand, within MPMX26_03034 at 3154.453 kb on - strand, within MPMX26_03034 at 3154.453 kb on - strand, within MPMX26_03034 at 3154.458 kb on - strand, within MPMX26_03034 at 3154.476 kb on - strand, within MPMX26_03034 at 3154.476 kb on - strand, within MPMX26_03034 at 3154.476 kb on - strand, within MPMX26_03034 at 3154.521 kb on - strand, within MPMX26_03034 at 3154.541 kb on - strand, within MPMX26_03034 at 3154.548 kb on - strand at 3154.965 kb on - strand, within MPMX26_03035 at 3154.965 kb on - strand, within MPMX26_03035 at 3154.965 kb on - strand, within MPMX26_03035 at 3154.965 kb on - strand, within MPMX26_03035 at 3154.965 kb on - strand, within MPMX26_03035 at 3154.965 kb on - strand, within MPMX26_03035 at 3154.975 kb on - strand, within MPMX26_03035 at 3154.975 kb on - strand, within MPMX26_03035 at 3154.977 kb on - strand, within MPMX26_03035 at 3154.987 kb on - strand, within MPMX26_03035 at 3154.987 kb on - strand, within MPMX26_03035 at 3154.992 kb on - strand, within MPMX26_03035 at 3154.992 kb on - strand, within MPMX26_03035 at 3154.992 kb on - strand, within MPMX26_03035 at 3154.992 kb on - strand, within MPMX26_03035 at 3155.060 kb on - strand, within MPMX26_03035 at 3155.060 kb on - strand, within MPMX26_03035 at 3155.063 kb on - strand, within MPMX26_03035 at 3155.067 kb on - strand, within MPMX26_03035 at 3155.068 kb on - strand, within MPMX26_03035 at 3155.068 kb on - strand, within MPMX26_03035 at 3155.070 kb on - strand, within MPMX26_03035 at 3155.076 kb on - strand, within MPMX26_03035 at 3155.086 kb on - strand, within MPMX26_03035 at 3155.086 kb on - strand, within MPMX26_03035 at 3155.086 kb on - strand, within MPMX26_03035 at 3155.090 kb on - strand, within MPMX26_03035 at 3155.090 kb on - strand, within MPMX26_03035 at 3155.110 kb on - strand, within MPMX26_03035
Per-strain Table
Position Strand Gene LocusTag Fraction no UV control remove 3,152,667 - -2.1 3,152,672 - -0.4 3,152,679 - -0.2 3,152,679 - -0.4 3,152,697 - -0.4 3,152,744 - -0.5 3,152,745 - +0.5 3,152,745 - +0.1 3,153,159 + -0.3 3,153,201 + +0.2 3,153,350 + -0.1 3,153,358 - +0.7 3,153,358 - -0.3 3,153,509 - MPMX26_03033 0.24 +1.8 3,153,583 + MPMX26_03033 0.33 -0.0 3,153,586 - MPMX26_03033 0.33 +0.2 3,153,627 - MPMX26_03033 0.38 -0.7 3,153,687 - MPMX26_03033 0.45 +0.2 3,153,798 + MPMX26_03033 0.58 -1.0 3,153,808 - MPMX26_03033 0.59 +0.7 3,153,877 - MPMX26_03033 0.67 +2.5 3,153,877 - MPMX26_03033 0.67 +1.5 3,153,877 - MPMX26_03033 0.67 -0.5 3,153,879 - MPMX26_03033 0.67 -2.6 3,153,912 - MPMX26_03033 0.71 +1.5 3,153,950 + MPMX26_03033 0.76 +0.2 3,153,981 - MPMX26_03033 0.79 +0.9 3,153,991 - MPMX26_03033 0.81 -0.4 3,153,991 - MPMX26_03033 0.81 +0.3 3,153,991 - MPMX26_03033 0.81 +0.9 3,153,991 - MPMX26_03033 0.81 -1.2 3,153,991 - MPMX26_03033 0.81 -1.3 3,154,088 + +1.5 3,154,096 - +0.0 3,154,096 - -0.8 3,154,419 - MPMX26_03034 0.61 +0.5 3,154,434 - MPMX26_03034 0.64 -0.1 3,154,434 - MPMX26_03034 0.64 -1.7 3,154,439 - MPMX26_03034 0.66 -0.5 3,154,453 - MPMX26_03034 0.69 -0.1 3,154,453 - MPMX26_03034 0.69 -0.1 3,154,453 - MPMX26_03034 0.69 -1.1 3,154,458 - MPMX26_03034 0.70 -0.8 3,154,476 - MPMX26_03034 0.74 -0.4 3,154,476 - MPMX26_03034 0.74 -0.6 3,154,476 - MPMX26_03034 0.74 +0.3 3,154,521 - MPMX26_03034 0.84 -0.6 3,154,541 - MPMX26_03034 0.89 -0.7 3,154,548 - -0.4 3,154,965 - MPMX26_03035 0.21 -0.6 3,154,965 - MPMX26_03035 0.21 -0.1 3,154,965 - MPMX26_03035 0.21 -1.0 3,154,965 - MPMX26_03035 0.21 +0.5 3,154,965 - MPMX26_03035 0.21 -0.9 3,154,965 - MPMX26_03035 0.21 -1.1 3,154,975 - MPMX26_03035 0.24 +0.9 3,154,975 - MPMX26_03035 0.24 -0.1 3,154,977 - MPMX26_03035 0.24 -0.6 3,154,987 - MPMX26_03035 0.28 -0.3 3,154,987 - MPMX26_03035 0.28 +0.1 3,154,992 - MPMX26_03035 0.29 -0.8 3,154,992 - MPMX26_03035 0.29 -1.0 3,154,992 - MPMX26_03035 0.29 -0.9 3,154,992 - MPMX26_03035 0.29 -1.5 3,155,060 - MPMX26_03035 0.51 -0.4 3,155,060 - MPMX26_03035 0.51 -0.1 3,155,063 - MPMX26_03035 0.52 +0.3 3,155,067 - MPMX26_03035 0.53 -0.6 3,155,068 - MPMX26_03035 0.53 +0.1 3,155,068 - MPMX26_03035 0.53 -0.1 3,155,070 - MPMX26_03035 0.54 -0.3 3,155,076 - MPMX26_03035 0.56 +0.3 3,155,086 - MPMX26_03035 0.59 -0.6 3,155,086 - MPMX26_03035 0.59 -0.3 3,155,086 - MPMX26_03035 0.59 -0.4 3,155,090 - MPMX26_03035 0.60 -0.4 3,155,090 - MPMX26_03035 0.60 +2.0 3,155,110 - MPMX26_03035 0.67 +0.9
Or see this region's nucleotide sequence