Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03025

Experiment: no UV control

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_03024 and MPMX26_03025 are separated by 536 nucleotidesMPMX26_03025 and MPMX26_03026 are separated by 72 nucleotides MPMX26_03024: MPMX26_03024 - hypothetical protein, at 3,142,355 to 3,143,833 _03024 MPMX26_03025: MPMX26_03025 - hypothetical protein, at 3,144,370 to 3,145,062 _03025 MPMX26_03026: MPMX26_03026 - hypothetical protein, at 3,145,135 to 3,146,220 _03026 Position (kb) 3144 3145 3146Strain fitness (log2 ratio) -2 -1 0 1 2at 3143.375 kb on - strand, within MPMX26_03024at 3143.462 kb on - strand, within MPMX26_03024at 3143.521 kb on - strand, within MPMX26_03024at 3143.521 kb on - strand, within MPMX26_03024at 3143.521 kb on - strand, within MPMX26_03024at 3143.529 kb on - strand, within MPMX26_03024at 3143.529 kb on - strand, within MPMX26_03024at 3143.529 kb on - strand, within MPMX26_03024at 3143.529 kb on - strand, within MPMX26_03024at 3143.529 kb on - strand, within MPMX26_03024at 3143.529 kb on - strand, within MPMX26_03024at 3143.529 kb on - strand, within MPMX26_03024at 3143.534 kb on - strand, within MPMX26_03024at 3143.534 kb on - strand, within MPMX26_03024at 3143.539 kb on - strand, within MPMX26_03024at 3143.539 kb on - strand, within MPMX26_03024at 3143.539 kb on - strand, within MPMX26_03024at 3143.561 kb on - strand, within MPMX26_03024at 3143.565 kb on - strand, within MPMX26_03024at 3143.566 kb on - strand, within MPMX26_03024at 3143.568 kb on - strand, within MPMX26_03024at 3143.568 kb on - strand, within MPMX26_03024at 3143.581 kb on - strand, within MPMX26_03024at 3143.594 kb on - strand, within MPMX26_03024at 3143.615 kb on - strand, within MPMX26_03024at 3143.615 kb on - strand, within MPMX26_03024at 3143.615 kb on - strand, within MPMX26_03024at 3143.615 kb on - strand, within MPMX26_03024at 3143.615 kb on - strand, within MPMX26_03024at 3143.615 kb on - strand, within MPMX26_03024at 3143.615 kb on - strand, within MPMX26_03024at 3143.615 kb on - strand, within MPMX26_03024at 3143.615 kb on - strand, within MPMX26_03024at 3143.651 kb on - strand, within MPMX26_03024at 3143.671 kb on - strand, within MPMX26_03024at 3143.681 kb on - strand, within MPMX26_03024at 3143.681 kb on - strand, within MPMX26_03024at 3143.681 kb on - strand, within MPMX26_03024at 3143.699 kb on - strandat 3143.770 kb on - strandat 3143.770 kb on - strandat 3144.450 kb on + strand, within MPMX26_03025at 3144.450 kb on + strand, within MPMX26_03025at 3144.450 kb on + strand, within MPMX26_03025at 3144.460 kb on + strand, within MPMX26_03025at 3144.468 kb on + strand, within MPMX26_03025at 3144.473 kb on + strand, within MPMX26_03025at 3144.483 kb on + strand, within MPMX26_03025at 3144.643 kb on + strand, within MPMX26_03025at 3144.648 kb on + strand, within MPMX26_03025at 3144.663 kb on + strand, within MPMX26_03025at 3144.679 kb on + strand, within MPMX26_03025at 3144.766 kb on + strand, within MPMX26_03025at 3144.766 kb on + strand, within MPMX26_03025at 3144.768 kb on + strand, within MPMX26_03025at 3144.787 kb on + strand, within MPMX26_03025at 3144.787 kb on + strand, within MPMX26_03025at 3144.792 kb on + strand, within MPMX26_03025at 3144.797 kb on + strand, within MPMX26_03025at 3144.802 kb on + strand, within MPMX26_03025at 3144.811 kb on + strand, within MPMX26_03025at 3144.822 kb on + strand, within MPMX26_03025at 3144.826 kb on + strand, within MPMX26_03025at 3144.855 kb on + strand, within MPMX26_03025at 3145.023 kb on + strandat 3145.030 kb on + strandat 3145.200 kb on + strandat 3145.210 kb on + strandat 3145.210 kb on + strandat 3145.308 kb on + strand, within MPMX26_03026at 3145.308 kb on + strand, within MPMX26_03026at 3145.336 kb on + strand, within MPMX26_03026at 3145.341 kb on + strand, within MPMX26_03026at 3145.341 kb on + strand, within MPMX26_03026at 3145.342 kb on + strand, within MPMX26_03026at 3145.380 kb on + strand, within MPMX26_03026at 3145.380 kb on + strand, within MPMX26_03026at 3145.380 kb on + strand, within MPMX26_03026at 3145.422 kb on + strand, within MPMX26_03026at 3145.443 kb on + strand, within MPMX26_03026at 3145.443 kb on + strand, within MPMX26_03026at 3145.443 kb on + strand, within MPMX26_03026at 3145.497 kb on + strand, within MPMX26_03026at 3145.497 kb on + strand, within MPMX26_03026at 3145.538 kb on + strand, within MPMX26_03026at 3145.538 kb on + strand, within MPMX26_03026at 3145.580 kb on + strand, within MPMX26_03026at 3145.662 kb on + strand, within MPMX26_03026at 3145.662 kb on + strand, within MPMX26_03026at 3145.735 kb on + strand, within MPMX26_03026at 3145.737 kb on + strand, within MPMX26_03026at 3145.740 kb on + strand, within MPMX26_03026at 3145.740 kb on + strand, within MPMX26_03026at 3145.740 kb on + strand, within MPMX26_03026at 3145.742 kb on + strand, within MPMX26_03026at 3145.795 kb on + strand, within MPMX26_03026at 3145.800 kb on + strand, within MPMX26_03026at 3145.800 kb on + strand, within MPMX26_03026at 3145.800 kb on + strand, within MPMX26_03026at 3145.800 kb on + strand, within MPMX26_03026at 3145.800 kb on + strand, within MPMX26_03026at 3145.800 kb on + strand, within MPMX26_03026at 3145.807 kb on + strand, within MPMX26_03026at 3145.807 kb on + strand, within MPMX26_03026at 3145.826 kb on + strand, within MPMX26_03026at 3145.836 kb on + strand, within MPMX26_03026at 3145.836 kb on + strand, within MPMX26_03026at 3145.836 kb on + strand, within MPMX26_03026at 3145.843 kb on + strand, within MPMX26_03026at 3145.848 kb on + strand, within MPMX26_03026at 3145.870 kb on + strand, within MPMX26_03026at 3145.906 kb on + strand, within MPMX26_03026at 3145.913 kb on + strand, within MPMX26_03026at 3145.938 kb on + strand, within MPMX26_03026at 3145.944 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.966 kb on + strand, within MPMX26_03026at 3145.973 kb on + strand, within MPMX26_03026at 3145.973 kb on + strand, within MPMX26_03026at 3145.981 kb on - strand, within MPMX26_03026at 3145.987 kb on + strand, within MPMX26_03026

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction no UV control
remove
3,143,375 - MPMX26_03024 0.69 +0.2
3,143,462 - MPMX26_03024 0.75 +0.5
3,143,521 - MPMX26_03024 0.79 +0.2
3,143,521 - MPMX26_03024 0.79 -0.0
3,143,521 - MPMX26_03024 0.79 -0.3
3,143,529 - MPMX26_03024 0.79 +0.7
3,143,529 - MPMX26_03024 0.79 +0.7
3,143,529 - MPMX26_03024 0.79 +0.1
3,143,529 - MPMX26_03024 0.79 -0.5
3,143,529 - MPMX26_03024 0.79 +2.5
3,143,529 - MPMX26_03024 0.79 +0.4
3,143,529 - MPMX26_03024 0.79 -0.1
3,143,534 - MPMX26_03024 0.80 -0.5
3,143,534 - MPMX26_03024 0.80 +0.2
3,143,539 - MPMX26_03024 0.80 +0.2
3,143,539 - MPMX26_03024 0.80 +0.4
3,143,539 - MPMX26_03024 0.80 -0.2
3,143,561 - MPMX26_03024 0.82 -0.7
3,143,565 - MPMX26_03024 0.82 +0.5
3,143,566 - MPMX26_03024 0.82 +0.1
3,143,568 - MPMX26_03024 0.82 -0.2
3,143,568 - MPMX26_03024 0.82 -1.0
3,143,581 - MPMX26_03024 0.83 +0.7
3,143,594 - MPMX26_03024 0.84 +1.2
3,143,615 - MPMX26_03024 0.85 -1.8
3,143,615 - MPMX26_03024 0.85 -0.2
3,143,615 - MPMX26_03024 0.85 -0.2
3,143,615 - MPMX26_03024 0.85 +0.7
3,143,615 - MPMX26_03024 0.85 -0.2
3,143,615 - MPMX26_03024 0.85 -0.2
3,143,615 - MPMX26_03024 0.85 +0.2
3,143,615 - MPMX26_03024 0.85 +1.4
3,143,615 - MPMX26_03024 0.85 -0.8
3,143,651 - MPMX26_03024 0.88 -0.0
3,143,671 - MPMX26_03024 0.89 +1.8
3,143,681 - MPMX26_03024 0.90 -0.1
3,143,681 - MPMX26_03024 0.90 +0.7
3,143,681 - MPMX26_03024 0.90 -0.3
3,143,699 - +0.2
3,143,770 - -0.3
3,143,770 - -0.6
3,144,450 + MPMX26_03025 0.12 +0.8
3,144,450 + MPMX26_03025 0.12 -0.1
3,144,450 + MPMX26_03025 0.12 +0.6
3,144,460 + MPMX26_03025 0.13 +0.0
3,144,468 + MPMX26_03025 0.14 -0.7
3,144,473 + MPMX26_03025 0.15 +0.5
3,144,483 + MPMX26_03025 0.16 -0.2
3,144,643 + MPMX26_03025 0.39 +0.5
3,144,648 + MPMX26_03025 0.40 +0.5
3,144,663 + MPMX26_03025 0.42 -1.0
3,144,679 + MPMX26_03025 0.45 +0.7
3,144,766 + MPMX26_03025 0.57 -0.3
3,144,766 + MPMX26_03025 0.57 +0.7
3,144,768 + MPMX26_03025 0.57 +0.5
3,144,787 + MPMX26_03025 0.60 -1.0
3,144,787 + MPMX26_03025 0.60 +0.6
3,144,792 + MPMX26_03025 0.61 +0.6
3,144,797 + MPMX26_03025 0.62 +1.5
3,144,802 + MPMX26_03025 0.62 +0.6
3,144,811 + MPMX26_03025 0.64 +0.7
3,144,822 + MPMX26_03025 0.65 +0.2
3,144,826 + MPMX26_03025 0.66 +0.0
3,144,855 + MPMX26_03025 0.70 -1.0
3,145,023 + +0.2
3,145,030 + +0.8
3,145,200 + +0.2
3,145,210 + -0.8
3,145,210 + +0.1
3,145,308 + MPMX26_03026 0.16 +0.4
3,145,308 + MPMX26_03026 0.16 +1.2
3,145,336 + MPMX26_03026 0.19 -1.6
3,145,341 + MPMX26_03026 0.19 +0.6
3,145,341 + MPMX26_03026 0.19 -0.1
3,145,342 + MPMX26_03026 0.19 -0.1
3,145,380 + MPMX26_03026 0.23 +0.0
3,145,380 + MPMX26_03026 0.23 -0.0
3,145,380 + MPMX26_03026 0.23 +1.2
3,145,422 + MPMX26_03026 0.26 -0.0
3,145,443 + MPMX26_03026 0.28 +0.2
3,145,443 + MPMX26_03026 0.28 -0.3
3,145,443 + MPMX26_03026 0.28 +1.2
3,145,497 + MPMX26_03026 0.33 -0.4
3,145,497 + MPMX26_03026 0.33 +0.6
3,145,538 + MPMX26_03026 0.37 +1.2
3,145,538 + MPMX26_03026 0.37 +0.7
3,145,580 + MPMX26_03026 0.41 -0.1
3,145,662 + MPMX26_03026 0.49 -0.8
3,145,662 + MPMX26_03026 0.49 +0.7
3,145,735 + MPMX26_03026 0.55 +0.8
3,145,737 + MPMX26_03026 0.55 -0.8
3,145,740 + MPMX26_03026 0.56 -0.8
3,145,740 + MPMX26_03026 0.56 -0.6
3,145,740 + MPMX26_03026 0.56 -0.1
3,145,742 + MPMX26_03026 0.56 -0.2
3,145,795 + MPMX26_03026 0.61 +0.8
3,145,800 + MPMX26_03026 0.61 +1.0
3,145,800 + MPMX26_03026 0.61 +0.4
3,145,800 + MPMX26_03026 0.61 +1.0
3,145,800 + MPMX26_03026 0.61 +1.1
3,145,800 + MPMX26_03026 0.61 +1.3
3,145,800 + MPMX26_03026 0.61 -0.8
3,145,807 + MPMX26_03026 0.62 +0.7
3,145,807 + MPMX26_03026 0.62 +0.0
3,145,826 + MPMX26_03026 0.64 +0.2
3,145,836 + MPMX26_03026 0.65 -0.1
3,145,836 + MPMX26_03026 0.65 +0.2
3,145,836 + MPMX26_03026 0.65 +1.0
3,145,843 + MPMX26_03026 0.65 +1.7
3,145,848 + MPMX26_03026 0.66 -0.1
3,145,870 + MPMX26_03026 0.68 -0.4
3,145,906 + MPMX26_03026 0.71 -0.9
3,145,913 + MPMX26_03026 0.72 +1.5
3,145,938 + MPMX26_03026 0.74 +1.1
3,145,944 + MPMX26_03026 0.74 -0.9
3,145,966 + MPMX26_03026 0.77 +0.5
3,145,966 + MPMX26_03026 0.77 +0.8
3,145,966 + MPMX26_03026 0.77 +0.3
3,145,966 + MPMX26_03026 0.77 -0.3
3,145,966 + MPMX26_03026 0.77 +0.3
3,145,966 + MPMX26_03026 0.77 +0.1
3,145,966 + MPMX26_03026 0.77 -1.3
3,145,966 + MPMX26_03026 0.77 +1.2
3,145,966 + MPMX26_03026 0.77 +0.6
3,145,966 + MPMX26_03026 0.77 +0.4
3,145,966 + MPMX26_03026 0.77 -0.9
3,145,966 + MPMX26_03026 0.77 -0.5
3,145,966 + MPMX26_03026 0.77 +0.6
3,145,966 + MPMX26_03026 0.77 -0.5
3,145,966 + MPMX26_03026 0.77 +1.3
3,145,966 + MPMX26_03026 0.77 -0.0
3,145,973 + MPMX26_03026 0.77 +0.1
3,145,973 + MPMX26_03026 0.77 +0.8
3,145,981 - MPMX26_03026 0.78 +0.0
3,145,987 + MPMX26_03026 0.78 -0.5

Or see this region's nucleotide sequence