Experiment: no UV control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02884 and MPMX26_02885 are separated by 313 nucleotides MPMX26_02885 and MPMX26_02886 are separated by 276 nucleotides MPMX26_02886 and MPMX26_02887 are separated by 76 nucleotides
MPMX26_02884: MPMX26_02884 - Catalase HPII, at 2,984,143 to 2,986,266
_02884
MPMX26_02885: MPMX26_02885 - hypothetical protein, at 2,986,580 to 2,987,224
_02885
MPMX26_02886: MPMX26_02886 - hypothetical protein, at 2,987,501 to 2,987,827
_02886
MPMX26_02887: MPMX26_02887 - General stress protein 39, at 2,987,904 to 2,988,770
_02887
Position (kb)
2986
2987
2988 Strain fitness (log2 ratio)
-1
0
1
2 at 2985.607 kb on + strand, within MPMX26_02884 at 2985.812 kb on + strand, within MPMX26_02884 at 2985.826 kb on + strand, within MPMX26_02884 at 2985.862 kb on + strand, within MPMX26_02884 at 2985.900 kb on + strand, within MPMX26_02884 at 2985.972 kb on + strand, within MPMX26_02884 at 2986.137 kb on - strand at 2986.147 kb on + strand at 2986.168 kb on + strand at 2986.176 kb on + strand at 2986.186 kb on + strand at 2986.195 kb on + strand at 2986.202 kb on + strand at 2986.202 kb on + strand at 2986.212 kb on + strand at 2986.828 kb on + strand, within MPMX26_02885 at 2987.011 kb on - strand, within MPMX26_02885 at 2987.504 kb on - strand at 2987.619 kb on + strand, within MPMX26_02886 at 2987.706 kb on + strand, within MPMX26_02886 at 2987.771 kb on + strand, within MPMX26_02886 at 2988.099 kb on + strand, within MPMX26_02887
Per-strain Table
Position Strand Gene LocusTag Fraction no UV control remove 2,985,607 + MPMX26_02884 0.69 +0.2 2,985,812 + MPMX26_02884 0.79 +0.8 2,985,826 + MPMX26_02884 0.79 -0.2 2,985,862 + MPMX26_02884 0.81 -0.1 2,985,900 + MPMX26_02884 0.83 +0.9 2,985,972 + MPMX26_02884 0.86 +1.5 2,986,137 - +2.2 2,986,147 + +0.6 2,986,168 + -0.4 2,986,176 + +0.6 2,986,186 + +1.2 2,986,195 + -0.5 2,986,202 + +0.9 2,986,202 + +0.2 2,986,212 + -1.0 2,986,828 + MPMX26_02885 0.38 -0.1 2,987,011 - MPMX26_02885 0.67 -0.6 2,987,504 - -1.3 2,987,619 + MPMX26_02886 0.36 +1.5 2,987,706 + MPMX26_02886 0.63 -0.3 2,987,771 + MPMX26_02886 0.83 -0.8 2,988,099 + MPMX26_02887 0.22 +0.5
Or see this region's nucleotide sequence