Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02836

Experiment: no UV control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02835 and MPMX26_02836 are separated by 639 nucleotidesMPMX26_02836 and MPMX26_02837 are separated by 84 nucleotides MPMX26_02835: MPMX26_02835 - hypothetical protein, at 2,924,180 to 2,926,426 _02835 MPMX26_02836: MPMX26_02836 - hypothetical protein, at 2,927,066 to 2,928,562 _02836 MPMX26_02837: MPMX26_02837 - Protein YhgF, at 2,928,647 to 2,931,004 _02837 Position (kb) 2927 2928 2929Strain fitness (log2 ratio) -1 0 1 2 3at 2926.135 kb on - strand, within MPMX26_02835at 2926.186 kb on - strand, within MPMX26_02835at 2926.199 kb on - strand, within MPMX26_02835at 2926.201 kb on - strand, within MPMX26_02835at 2926.201 kb on - strand, within MPMX26_02835at 2926.201 kb on - strand, within MPMX26_02835at 2926.202 kb on - strandat 2926.289 kb on - strandat 2926.295 kb on - strandat 2926.319 kb on - strandat 2926.327 kb on - strandat 2926.329 kb on - strandat 2926.494 kb on + strandat 2926.810 kb on - strandat 2927.111 kb on - strandat 2927.123 kb on - strandat 2927.123 kb on - strandat 2927.123 kb on - strandat 2927.131 kb on - strandat 2927.416 kb on - strand, within MPMX26_02836at 2927.416 kb on - strand, within MPMX26_02836at 2927.416 kb on - strand, within MPMX26_02836at 2927.416 kb on - strand, within MPMX26_02836at 2927.468 kb on - strand, within MPMX26_02836at 2927.806 kb on - strand, within MPMX26_02836at 2927.806 kb on - strand, within MPMX26_02836at 2928.277 kb on - strand, within MPMX26_02836at 2928.280 kb on - strand, within MPMX26_02836at 2928.296 kb on - strand, within MPMX26_02836at 2928.625 kb on - strandat 2928.625 kb on - strandat 2928.666 kb on - strandat 2928.666 kb on - strandat 2928.732 kb on - strandat 2928.737 kb on - strandat 2928.742 kb on - strandat 2928.753 kb on - strandat 2928.772 kb on - strandat 2928.772 kb on - strandat 2928.775 kb on - strandat 2928.775 kb on - strandat 2928.784 kb on - strandat 2928.785 kb on - strandat 2928.785 kb on - strandat 2928.785 kb on - strandat 2928.785 kb on - strandat 2928.785 kb on - strandat 2928.797 kb on - strandat 2928.835 kb on - strandat 2928.846 kb on - strandat 2928.851 kb on - strandat 2928.864 kb on - strandat 2928.871 kb on - strandat 2928.872 kb on - strandat 2928.872 kb on - strandat 2928.872 kb on - strandat 2928.899 kb on - strand, within MPMX26_02837at 2928.899 kb on - strand, within MPMX26_02837at 2928.899 kb on - strand, within MPMX26_02837at 2928.911 kb on - strand, within MPMX26_02837at 2928.911 kb on - strand, within MPMX26_02837at 2928.922 kb on - strand, within MPMX26_02837at 2929.001 kb on - strand, within MPMX26_02837at 2929.062 kb on - strand, within MPMX26_02837at 2929.078 kb on - strand, within MPMX26_02837at 2929.083 kb on - strand, within MPMX26_02837at 2929.101 kb on - strand, within MPMX26_02837at 2929.126 kb on - strand, within MPMX26_02837at 2929.180 kb on - strand, within MPMX26_02837at 2929.180 kb on - strand, within MPMX26_02837at 2929.180 kb on - strand, within MPMX26_02837at 2929.189 kb on - strand, within MPMX26_02837at 2929.189 kb on - strand, within MPMX26_02837at 2929.189 kb on - strand, within MPMX26_02837at 2929.189 kb on - strand, within MPMX26_02837at 2929.189 kb on - strand, within MPMX26_02837at 2929.206 kb on - strand, within MPMX26_02837at 2929.230 kb on - strand, within MPMX26_02837at 2929.230 kb on - strand, within MPMX26_02837at 2929.230 kb on - strand, within MPMX26_02837at 2929.230 kb on - strand, within MPMX26_02837at 2929.235 kb on - strand, within MPMX26_02837at 2929.235 kb on - strand, within MPMX26_02837at 2929.235 kb on - strand, within MPMX26_02837at 2929.236 kb on - strand, within MPMX26_02837at 2929.294 kb on - strand, within MPMX26_02837at 2929.317 kb on - strand, within MPMX26_02837at 2929.356 kb on - strand, within MPMX26_02837at 2929.435 kb on - strand, within MPMX26_02837at 2929.435 kb on - strand, within MPMX26_02837at 2929.437 kb on - strand, within MPMX26_02837at 2929.501 kb on - strand, within MPMX26_02837at 2929.541 kb on - strand, within MPMX26_02837at 2929.541 kb on - strand, within MPMX26_02837at 2929.541 kb on - strand, within MPMX26_02837at 2929.548 kb on - strand, within MPMX26_02837at 2929.548 kb on - strand, within MPMX26_02837at 2929.548 kb on - strand, within MPMX26_02837at 2929.550 kb on - strand, within MPMX26_02837

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Per-strain Table

Position Strand Gene LocusTag Fraction no UV control
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2,926,135 - MPMX26_02835 0.87 +0.3
2,926,186 - MPMX26_02835 0.89 +0.8
2,926,199 - MPMX26_02835 0.90 +0.2
2,926,201 - MPMX26_02835 0.90 +1.5
2,926,201 - MPMX26_02835 0.90 -0.0
2,926,201 - MPMX26_02835 0.90 +0.4
2,926,202 - -0.0
2,926,289 - -0.1
2,926,295 - -0.5
2,926,319 - -0.8
2,926,327 - +0.5
2,926,329 - +3.5
2,926,494 + -0.5
2,926,810 - +1.5
2,927,111 - -0.7
2,927,123 - -0.1
2,927,123 - +1.2
2,927,123 - +0.0
2,927,131 - +0.2
2,927,416 - MPMX26_02836 0.23 +3.1
2,927,416 - MPMX26_02836 0.23 -0.8
2,927,416 - MPMX26_02836 0.23 -0.9
2,927,416 - MPMX26_02836 0.23 +0.2
2,927,468 - MPMX26_02836 0.27 +0.2
2,927,806 - MPMX26_02836 0.49 -1.6
2,927,806 - MPMX26_02836 0.49 -0.1
2,928,277 - MPMX26_02836 0.81 +0.1
2,928,280 - MPMX26_02836 0.81 -0.0
2,928,296 - MPMX26_02836 0.82 -0.1
2,928,625 - +0.8
2,928,625 - -0.1
2,928,666 - -0.1
2,928,666 - -0.7
2,928,732 - -0.8
2,928,737 - +1.5
2,928,742 - +0.0
2,928,753 - +0.6
2,928,772 - +0.1
2,928,772 - -0.3
2,928,775 - -1.1
2,928,775 - -0.8
2,928,784 - +0.6
2,928,785 - +0.2
2,928,785 - -0.2
2,928,785 - -0.4
2,928,785 - -0.5
2,928,785 - +0.1
2,928,797 - +0.1
2,928,835 - -1.5
2,928,846 - -0.0
2,928,851 - +0.3
2,928,864 - -0.1
2,928,871 - -0.5
2,928,872 - -0.1
2,928,872 - -0.2
2,928,872 - +0.2
2,928,899 - MPMX26_02837 0.11 -0.1
2,928,899 - MPMX26_02837 0.11 -0.2
2,928,899 - MPMX26_02837 0.11 -0.6
2,928,911 - MPMX26_02837 0.11 -0.1
2,928,911 - MPMX26_02837 0.11 -0.1
2,928,922 - MPMX26_02837 0.12 -0.6
2,929,001 - MPMX26_02837 0.15 -0.9
2,929,062 - MPMX26_02837 0.18 -0.5
2,929,078 - MPMX26_02837 0.18 +1.2
2,929,083 - MPMX26_02837 0.18 +0.0
2,929,101 - MPMX26_02837 0.19 -0.3
2,929,126 - MPMX26_02837 0.20 -1.2
2,929,180 - MPMX26_02837 0.23 +0.9
2,929,180 - MPMX26_02837 0.23 -0.6
2,929,180 - MPMX26_02837 0.23 -0.2
2,929,189 - MPMX26_02837 0.23 -0.0
2,929,189 - MPMX26_02837 0.23 -0.6
2,929,189 - MPMX26_02837 0.23 -0.4
2,929,189 - MPMX26_02837 0.23 +1.0
2,929,189 - MPMX26_02837 0.23 +0.9
2,929,206 - MPMX26_02837 0.24 +0.4
2,929,230 - MPMX26_02837 0.25 -0.1
2,929,230 - MPMX26_02837 0.25 -0.2
2,929,230 - MPMX26_02837 0.25 -0.2
2,929,230 - MPMX26_02837 0.25 -0.0
2,929,235 - MPMX26_02837 0.25 -1.1
2,929,235 - MPMX26_02837 0.25 +0.6
2,929,235 - MPMX26_02837 0.25 +0.1
2,929,236 - MPMX26_02837 0.25 +0.3
2,929,294 - MPMX26_02837 0.27 -0.6
2,929,317 - MPMX26_02837 0.28 -0.8
2,929,356 - MPMX26_02837 0.30 -0.3
2,929,435 - MPMX26_02837 0.33 +0.6
2,929,435 - MPMX26_02837 0.33 +0.3
2,929,437 - MPMX26_02837 0.34 -0.6
2,929,501 - MPMX26_02837 0.36 -0.1
2,929,541 - MPMX26_02837 0.38 +0.3
2,929,541 - MPMX26_02837 0.38 +0.1
2,929,541 - MPMX26_02837 0.38 +0.8
2,929,548 - MPMX26_02837 0.38 +0.3
2,929,548 - MPMX26_02837 0.38 -0.2
2,929,548 - MPMX26_02837 0.38 -0.4
2,929,550 - MPMX26_02837 0.38 +0.3

Or see this region's nucleotide sequence