Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02835

Experiment: no UV control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02834 and MPMX26_02835 are separated by 59 nucleotidesMPMX26_02835 and MPMX26_02836 are separated by 639 nucleotides MPMX26_02834: MPMX26_02834 - Fatty acyl-CoA reductase, at 2,923,233 to 2,924,120 _02834 MPMX26_02835: MPMX26_02835 - hypothetical protein, at 2,924,180 to 2,926,426 _02835 MPMX26_02836: MPMX26_02836 - hypothetical protein, at 2,927,066 to 2,928,562 _02836 Position (kb) 2924 2925 2926 2927Strain fitness (log2 ratio) -1 0 1 2 3at 2923.287 kb on + strandat 2923.348 kb on + strand, within MPMX26_02834at 2923.372 kb on + strand, within MPMX26_02834at 2923.379 kb on + strand, within MPMX26_02834at 2923.455 kb on + strand, within MPMX26_02834at 2923.455 kb on + strand, within MPMX26_02834at 2923.498 kb on + strand, within MPMX26_02834at 2923.498 kb on + strand, within MPMX26_02834at 2923.498 kb on + strand, within MPMX26_02834at 2923.535 kb on + strand, within MPMX26_02834at 2923.537 kb on + strand, within MPMX26_02834at 2923.582 kb on + strand, within MPMX26_02834at 2923.658 kb on + strand, within MPMX26_02834at 2923.698 kb on + strand, within MPMX26_02834at 2923.703 kb on + strand, within MPMX26_02834at 2923.703 kb on + strand, within MPMX26_02834at 2923.776 kb on + strand, within MPMX26_02834at 2923.821 kb on + strand, within MPMX26_02834at 2923.865 kb on + strand, within MPMX26_02834at 2923.870 kb on + strand, within MPMX26_02834at 2923.873 kb on + strand, within MPMX26_02834at 2923.877 kb on + strand, within MPMX26_02834at 2923.882 kb on + strand, within MPMX26_02834at 2923.882 kb on + strand, within MPMX26_02834at 2923.882 kb on + strand, within MPMX26_02834at 2923.894 kb on + strand, within MPMX26_02834at 2923.908 kb on + strand, within MPMX26_02834at 2923.917 kb on + strand, within MPMX26_02834at 2923.919 kb on + strand, within MPMX26_02834at 2924.017 kb on + strand, within MPMX26_02834at 2924.017 kb on + strand, within MPMX26_02834at 2924.017 kb on + strand, within MPMX26_02834at 2924.017 kb on + strand, within MPMX26_02834at 2924.027 kb on + strand, within MPMX26_02834at 2924.106 kb on + strandat 2924.106 kb on + strandat 2924.106 kb on + strandat 2924.198 kb on - strandat 2924.212 kb on - strandat 2924.212 kb on - strandat 2924.212 kb on - strandat 2924.212 kb on - strandat 2924.212 kb on - strandat 2924.212 kb on - strandat 2924.362 kb on - strandat 2924.367 kb on - strandat 2924.367 kb on - strandat 2924.375 kb on + strandat 2925.557 kb on - strand, within MPMX26_02835at 2925.613 kb on - strand, within MPMX26_02835at 2926.135 kb on - strand, within MPMX26_02835at 2926.186 kb on - strand, within MPMX26_02835at 2926.199 kb on - strand, within MPMX26_02835at 2926.201 kb on - strand, within MPMX26_02835at 2926.201 kb on - strand, within MPMX26_02835at 2926.201 kb on - strand, within MPMX26_02835at 2926.202 kb on - strandat 2926.289 kb on - strandat 2926.295 kb on - strandat 2926.319 kb on - strandat 2926.327 kb on - strandat 2926.329 kb on - strandat 2926.494 kb on + strandat 2926.810 kb on - strandat 2927.111 kb on - strandat 2927.123 kb on - strandat 2927.123 kb on - strandat 2927.123 kb on - strandat 2927.131 kb on - strandat 2927.416 kb on - strand, within MPMX26_02836at 2927.416 kb on - strand, within MPMX26_02836at 2927.416 kb on - strand, within MPMX26_02836at 2927.416 kb on - strand, within MPMX26_02836

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Per-strain Table

Position Strand Gene LocusTag Fraction no UV control
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2,923,287 + +0.3
2,923,348 + MPMX26_02834 0.13 -1.1
2,923,372 + MPMX26_02834 0.16 -0.6
2,923,379 + MPMX26_02834 0.16 -0.7
2,923,455 + MPMX26_02834 0.25 +0.5
2,923,455 + MPMX26_02834 0.25 +0.1
2,923,498 + MPMX26_02834 0.30 +1.0
2,923,498 + MPMX26_02834 0.30 +1.5
2,923,498 + MPMX26_02834 0.30 +0.2
2,923,535 + MPMX26_02834 0.34 +0.0
2,923,537 + MPMX26_02834 0.34 +0.4
2,923,582 + MPMX26_02834 0.39 -0.1
2,923,658 + MPMX26_02834 0.48 -0.4
2,923,698 + MPMX26_02834 0.52 -0.3
2,923,703 + MPMX26_02834 0.53 -0.2
2,923,703 + MPMX26_02834 0.53 -1.3
2,923,776 + MPMX26_02834 0.61 +1.5
2,923,821 + MPMX26_02834 0.66 +0.2
2,923,865 + MPMX26_02834 0.71 -0.7
2,923,870 + MPMX26_02834 0.72 -1.4
2,923,873 + MPMX26_02834 0.72 -0.4
2,923,877 + MPMX26_02834 0.73 +0.5
2,923,882 + MPMX26_02834 0.73 -1.1
2,923,882 + MPMX26_02834 0.73 -1.3
2,923,882 + MPMX26_02834 0.73 -0.1
2,923,894 + MPMX26_02834 0.74 -0.5
2,923,908 + MPMX26_02834 0.76 -0.3
2,923,917 + MPMX26_02834 0.77 +0.1
2,923,919 + MPMX26_02834 0.77 +0.3
2,924,017 + MPMX26_02834 0.88 -0.1
2,924,017 + MPMX26_02834 0.88 +0.5
2,924,017 + MPMX26_02834 0.88 +0.3
2,924,017 + MPMX26_02834 0.88 -0.0
2,924,027 + MPMX26_02834 0.89 -0.9
2,924,106 + -0.5
2,924,106 + -0.4
2,924,106 + -0.1
2,924,198 - +1.3
2,924,212 - +0.8
2,924,212 - +0.5
2,924,212 - -0.2
2,924,212 - +0.8
2,924,212 - -0.2
2,924,212 - +0.3
2,924,362 - +0.3
2,924,367 - -0.4
2,924,367 - +0.5
2,924,375 + +0.7
2,925,557 - MPMX26_02835 0.61 +0.5
2,925,613 - MPMX26_02835 0.64 -0.3
2,926,135 - MPMX26_02835 0.87 +0.3
2,926,186 - MPMX26_02835 0.89 +0.8
2,926,199 - MPMX26_02835 0.90 +0.2
2,926,201 - MPMX26_02835 0.90 +1.5
2,926,201 - MPMX26_02835 0.90 -0.0
2,926,201 - MPMX26_02835 0.90 +0.4
2,926,202 - -0.0
2,926,289 - -0.1
2,926,295 - -0.5
2,926,319 - -0.8
2,926,327 - +0.5
2,926,329 - +3.5
2,926,494 + -0.5
2,926,810 - +1.5
2,927,111 - -0.7
2,927,123 - -0.1
2,927,123 - +1.2
2,927,123 - +0.0
2,927,131 - +0.2
2,927,416 - MPMX26_02836 0.23 +3.1
2,927,416 - MPMX26_02836 0.23 -0.8
2,927,416 - MPMX26_02836 0.23 -0.9
2,927,416 - MPMX26_02836 0.23 +0.2

Or see this region's nucleotide sequence