Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02677

Experiment: no UV control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02676 and MPMX26_02677 are separated by 71 nucleotidesMPMX26_02677 and MPMX26_02678 are separated by 37 nucleotidesMPMX26_02678 and MPMX26_02679 are separated by 154 nucleotides MPMX26_02676: MPMX26_02676 - hypothetical protein, at 2,771,367 to 2,772,611 _02676 MPMX26_02677: MPMX26_02677 - putative protein YcgM, at 2,772,683 to 2,773,321 _02677 MPMX26_02678: MPMX26_02678 - hypothetical protein, at 2,773,359 to 2,773,856 _02678 MPMX26_02679: MPMX26_02679 - hypothetical protein, at 2,774,011 to 2,775,318 _02679 Position (kb) 2772 2773 2774Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 2771.711 kb on + strand, within MPMX26_02676at 2771.741 kb on + strand, within MPMX26_02676at 2771.741 kb on + strand, within MPMX26_02676at 2771.799 kb on + strand, within MPMX26_02676at 2771.799 kb on + strand, within MPMX26_02676at 2771.832 kb on + strand, within MPMX26_02676at 2771.840 kb on + strand, within MPMX26_02676at 2771.859 kb on + strand, within MPMX26_02676at 2771.889 kb on + strand, within MPMX26_02676at 2771.889 kb on + strand, within MPMX26_02676at 2771.969 kb on + strand, within MPMX26_02676at 2771.973 kb on + strand, within MPMX26_02676at 2771.973 kb on + strand, within MPMX26_02676at 2772.006 kb on + strand, within MPMX26_02676at 2772.061 kb on + strand, within MPMX26_02676at 2772.171 kb on + strand, within MPMX26_02676at 2772.176 kb on + strand, within MPMX26_02676at 2772.222 kb on + strand, within MPMX26_02676at 2772.231 kb on + strand, within MPMX26_02676at 2772.237 kb on + strand, within MPMX26_02676at 2772.240 kb on + strand, within MPMX26_02676at 2772.315 kb on + strand, within MPMX26_02676at 2772.449 kb on + strand, within MPMX26_02676at 2772.459 kb on + strand, within MPMX26_02676at 2772.473 kb on + strand, within MPMX26_02676at 2772.527 kb on + strandat 2772.542 kb on + strandat 2772.675 kb on - strandat 2772.676 kb on - strandat 2772.701 kb on - strandat 2772.701 kb on - strandat 2772.701 kb on - strandat 2772.729 kb on - strandat 2772.731 kb on - strandat 2772.776 kb on - strand, within MPMX26_02677at 2772.776 kb on - strand, within MPMX26_02677at 2772.786 kb on - strand, within MPMX26_02677at 2772.788 kb on - strand, within MPMX26_02677at 2772.813 kb on - strand, within MPMX26_02677at 2772.813 kb on - strand, within MPMX26_02677at 2772.821 kb on - strand, within MPMX26_02677at 2772.821 kb on - strand, within MPMX26_02677at 2772.821 kb on - strand, within MPMX26_02677at 2772.821 kb on - strand, within MPMX26_02677at 2772.877 kb on - strand, within MPMX26_02677at 2772.884 kb on - strand, within MPMX26_02677at 2772.885 kb on - strand, within MPMX26_02677at 2772.902 kb on - strand, within MPMX26_02677at 2772.948 kb on - strand, within MPMX26_02677at 2772.954 kb on - strand, within MPMX26_02677at 2772.954 kb on - strand, within MPMX26_02677at 2772.954 kb on - strand, within MPMX26_02677at 2772.954 kb on - strand, within MPMX26_02677at 2772.992 kb on - strand, within MPMX26_02677at 2772.992 kb on - strand, within MPMX26_02677at 2772.992 kb on - strand, within MPMX26_02677at 2772.992 kb on - strand, within MPMX26_02677at 2773.009 kb on - strand, within MPMX26_02677at 2773.010 kb on - strand, within MPMX26_02677at 2773.010 kb on - strand, within MPMX26_02677at 2773.015 kb on - strand, within MPMX26_02677at 2773.021 kb on - strand, within MPMX26_02677at 2773.021 kb on - strand, within MPMX26_02677at 2773.022 kb on - strand, within MPMX26_02677at 2773.056 kb on - strand, within MPMX26_02677at 2773.144 kb on - strand, within MPMX26_02677at 2773.155 kb on - strand, within MPMX26_02677at 2773.155 kb on - strand, within MPMX26_02677at 2773.197 kb on - strand, within MPMX26_02677at 2773.216 kb on - strand, within MPMX26_02677at 2773.236 kb on - strand, within MPMX26_02677at 2773.236 kb on - strand, within MPMX26_02677at 2773.246 kb on - strand, within MPMX26_02677at 2773.246 kb on - strand, within MPMX26_02677at 2773.246 kb on - strand, within MPMX26_02677at 2773.246 kb on - strand, within MPMX26_02677at 2773.250 kb on - strand, within MPMX26_02677at 2773.250 kb on - strand, within MPMX26_02677at 2773.261 kb on - strandat 2773.261 kb on - strandat 2773.261 kb on - strandat 2773.261 kb on - strandat 2773.279 kb on - strandat 2773.288 kb on - strandat 2773.433 kb on - strand, within MPMX26_02678at 2773.490 kb on - strand, within MPMX26_02678at 2773.490 kb on - strand, within MPMX26_02678at 2773.490 kb on - strand, within MPMX26_02678at 2773.498 kb on - strand, within MPMX26_02678at 2773.538 kb on - strand, within MPMX26_02678at 2773.540 kb on - strand, within MPMX26_02678at 2773.540 kb on - strand, within MPMX26_02678at 2773.540 kb on - strand, within MPMX26_02678at 2773.540 kb on - strand, within MPMX26_02678at 2773.540 kb on - strand, within MPMX26_02678at 2773.545 kb on - strand, within MPMX26_02678at 2773.561 kb on - strand, within MPMX26_02678at 2773.587 kb on - strand, within MPMX26_02678at 2773.608 kb on - strand, within MPMX26_02678at 2773.638 kb on - strand, within MPMX26_02678at 2773.705 kb on - strand, within MPMX26_02678at 2773.729 kb on - strand, within MPMX26_02678at 2773.729 kb on - strand, within MPMX26_02678at 2773.737 kb on - strand, within MPMX26_02678at 2773.739 kb on - strand, within MPMX26_02678at 2773.742 kb on - strand, within MPMX26_02678at 2773.742 kb on - strand, within MPMX26_02678at 2773.753 kb on - strand, within MPMX26_02678at 2773.819 kb on - strandat 2773.819 kb on - strandat 2773.838 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction no UV control
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2,771,711 + MPMX26_02676 0.28 -0.5
2,771,741 + MPMX26_02676 0.30 -0.6
2,771,741 + MPMX26_02676 0.30 +0.3
2,771,799 + MPMX26_02676 0.35 -0.6
2,771,799 + MPMX26_02676 0.35 -0.3
2,771,832 + MPMX26_02676 0.37 +0.2
2,771,840 + MPMX26_02676 0.38 +0.1
2,771,859 + MPMX26_02676 0.40 +0.4
2,771,889 + MPMX26_02676 0.42 +1.4
2,771,889 + MPMX26_02676 0.42 -0.6
2,771,969 + MPMX26_02676 0.48 +0.8
2,771,973 + MPMX26_02676 0.49 +0.4
2,771,973 + MPMX26_02676 0.49 -0.6
2,772,006 + MPMX26_02676 0.51 -0.7
2,772,061 + MPMX26_02676 0.56 -0.1
2,772,171 + MPMX26_02676 0.65 +1.9
2,772,176 + MPMX26_02676 0.65 +0.3
2,772,222 + MPMX26_02676 0.69 -0.0
2,772,231 + MPMX26_02676 0.69 +1.2
2,772,237 + MPMX26_02676 0.70 +3.8
2,772,240 + MPMX26_02676 0.70 +1.1
2,772,315 + MPMX26_02676 0.76 +0.6
2,772,449 + MPMX26_02676 0.87 -0.1
2,772,459 + MPMX26_02676 0.88 -1.0
2,772,473 + MPMX26_02676 0.89 +0.4
2,772,527 + +0.7
2,772,542 + -0.5
2,772,675 - -0.3
2,772,676 - -0.0
2,772,701 - -0.3
2,772,701 - -0.5
2,772,701 - -0.6
2,772,729 - +0.6
2,772,731 - -0.2
2,772,776 - MPMX26_02677 0.15 -0.6
2,772,776 - MPMX26_02677 0.15 -0.7
2,772,786 - MPMX26_02677 0.16 -0.7
2,772,788 - MPMX26_02677 0.16 -0.5
2,772,813 - MPMX26_02677 0.20 +0.2
2,772,813 - MPMX26_02677 0.20 +0.5
2,772,821 - MPMX26_02677 0.22 -0.1
2,772,821 - MPMX26_02677 0.22 +0.2
2,772,821 - MPMX26_02677 0.22 +0.2
2,772,821 - MPMX26_02677 0.22 -0.1
2,772,877 - MPMX26_02677 0.30 -0.0
2,772,884 - MPMX26_02677 0.31 -1.0
2,772,885 - MPMX26_02677 0.32 +0.2
2,772,902 - MPMX26_02677 0.34 +0.3
2,772,948 - MPMX26_02677 0.41 -0.1
2,772,954 - MPMX26_02677 0.42 +0.8
2,772,954 - MPMX26_02677 0.42 +0.3
2,772,954 - MPMX26_02677 0.42 +0.9
2,772,954 - MPMX26_02677 0.42 +2.5
2,772,992 - MPMX26_02677 0.48 +0.4
2,772,992 - MPMX26_02677 0.48 +0.7
2,772,992 - MPMX26_02677 0.48 -0.3
2,772,992 - MPMX26_02677 0.48 -0.9
2,773,009 - MPMX26_02677 0.51 -0.7
2,773,010 - MPMX26_02677 0.51 -0.1
2,773,010 - MPMX26_02677 0.51 +0.1
2,773,015 - MPMX26_02677 0.52 +0.2
2,773,021 - MPMX26_02677 0.53 -0.2
2,773,021 - MPMX26_02677 0.53 -0.5
2,773,022 - MPMX26_02677 0.53 +0.0
2,773,056 - MPMX26_02677 0.58 -0.1
2,773,144 - MPMX26_02677 0.72 -0.2
2,773,155 - MPMX26_02677 0.74 +2.0
2,773,155 - MPMX26_02677 0.74 +0.2
2,773,197 - MPMX26_02677 0.80 -0.2
2,773,216 - MPMX26_02677 0.83 -0.8
2,773,236 - MPMX26_02677 0.87 -0.1
2,773,236 - MPMX26_02677 0.87 -0.8
2,773,246 - MPMX26_02677 0.88 -1.1
2,773,246 - MPMX26_02677 0.88 +1.5
2,773,246 - MPMX26_02677 0.88 +0.2
2,773,246 - MPMX26_02677 0.88 -0.2
2,773,250 - MPMX26_02677 0.89 -0.4
2,773,250 - MPMX26_02677 0.89 -0.2
2,773,261 - +0.1
2,773,261 - +0.3
2,773,261 - -0.0
2,773,261 - -0.1
2,773,279 - -0.3
2,773,288 - +0.0
2,773,433 - MPMX26_02678 0.15 -0.8
2,773,490 - MPMX26_02678 0.26 -1.1
2,773,490 - MPMX26_02678 0.26 -0.2
2,773,490 - MPMX26_02678 0.26 -0.8
2,773,498 - MPMX26_02678 0.28 -2.0
2,773,538 - MPMX26_02678 0.36 -0.4
2,773,540 - MPMX26_02678 0.36 +0.4
2,773,540 - MPMX26_02678 0.36 +0.4
2,773,540 - MPMX26_02678 0.36 +0.5
2,773,540 - MPMX26_02678 0.36 -0.3
2,773,540 - MPMX26_02678 0.36 +0.8
2,773,545 - MPMX26_02678 0.37 -0.3
2,773,561 - MPMX26_02678 0.41 -0.1
2,773,587 - MPMX26_02678 0.46 -0.3
2,773,608 - MPMX26_02678 0.50 -1.3
2,773,638 - MPMX26_02678 0.56 -0.1
2,773,705 - MPMX26_02678 0.69 +0.1
2,773,729 - MPMX26_02678 0.74 +0.1
2,773,729 - MPMX26_02678 0.74 +0.2
2,773,737 - MPMX26_02678 0.76 -0.7
2,773,739 - MPMX26_02678 0.76 +0.3
2,773,742 - MPMX26_02678 0.77 -0.1
2,773,742 - MPMX26_02678 0.77 -1.3
2,773,753 - MPMX26_02678 0.79 -1.0
2,773,819 - +0.9
2,773,819 - -0.5
2,773,838 - -0.1

Or see this region's nucleotide sequence