Experiment: no UV control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02574 and MPMX26_02575 are separated by 13 nucleotides MPMX26_02575 and MPMX26_02576 are separated by 135 nucleotides MPMX26_02576 and MPMX26_02577 are separated by 23 nucleotides MPMX26_02577 and MPMX26_02578 are separated by 103 nucleotides
MPMX26_02574: MPMX26_02574 - Undecaprenyl-diphosphatase, at 2,666,562 to 2,667,386
_02574
MPMX26_02575: MPMX26_02575 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaB, at 2,667,400 to 2,668,065
_02575
MPMX26_02576: MPMX26_02576 - Protein YrdA, at 2,668,201 to 2,668,731
_02576
MPMX26_02577: MPMX26_02577 - putative Nudix hydrolase NudL, at 2,668,755 to 2,669,360
_02577
MPMX26_02578: MPMX26_02578 - NADH pyrophosphatase, at 2,669,464 to 2,670,039
_02578
Position (kb)
2668
2669 Strain fitness (log2 ratio)
-1
0
1
2 at 2667.207 kb on - strand, within MPMX26_02574 at 2667.233 kb on - strand, within MPMX26_02574 at 2667.253 kb on - strand, within MPMX26_02574 at 2667.349 kb on - strand at 2667.369 kb on - strand at 2667.369 kb on - strand at 2667.388 kb on - strand at 2667.411 kb on - strand at 2667.412 kb on - strand at 2667.417 kb on - strand at 2668.112 kb on - strand at 2668.222 kb on - strand at 2668.232 kb on - strand at 2668.255 kb on - strand, within MPMX26_02576 at 2668.255 kb on - strand, within MPMX26_02576 at 2668.255 kb on - strand, within MPMX26_02576 at 2668.255 kb on - strand, within MPMX26_02576 at 2668.255 kb on - strand, within MPMX26_02576 at 2668.255 kb on - strand, within MPMX26_02576 at 2668.255 kb on - strand, within MPMX26_02576 at 2668.255 kb on - strand, within MPMX26_02576 at 2668.447 kb on + strand, within MPMX26_02576 at 2668.455 kb on - strand, within MPMX26_02576 at 2668.464 kb on - strand, within MPMX26_02576 at 2668.465 kb on - strand, within MPMX26_02576 at 2668.537 kb on - strand, within MPMX26_02576 at 2668.537 kb on - strand, within MPMX26_02576 at 2668.539 kb on - strand, within MPMX26_02576 at 2668.539 kb on - strand, within MPMX26_02576 at 2668.605 kb on - strand, within MPMX26_02576 at 2668.642 kb on - strand, within MPMX26_02576 at 2668.642 kb on - strand, within MPMX26_02576 at 2668.671 kb on - strand, within MPMX26_02576 at 2668.671 kb on - strand, within MPMX26_02576 at 2668.687 kb on - strand at 2668.687 kb on - strand at 2668.687 kb on - strand at 2668.687 kb on - strand at 2668.833 kb on - strand, within MPMX26_02577 at 2668.833 kb on - strand, within MPMX26_02577 at 2669.085 kb on - strand, within MPMX26_02577 at 2669.093 kb on + strand, within MPMX26_02577 at 2669.150 kb on + strand, within MPMX26_02577 at 2669.204 kb on - strand, within MPMX26_02577 at 2669.212 kb on - strand, within MPMX26_02577 at 2669.254 kb on - strand, within MPMX26_02577 at 2669.265 kb on - strand, within MPMX26_02577 at 2669.294 kb on - strand, within MPMX26_02577 at 2669.618 kb on + strand, within MPMX26_02578 at 2669.618 kb on + strand, within MPMX26_02578 at 2669.618 kb on + strand, within MPMX26_02578 at 2669.646 kb on + strand, within MPMX26_02578 at 2669.660 kb on + strand, within MPMX26_02578 at 2669.660 kb on + strand, within MPMX26_02578 at 2669.660 kb on + strand, within MPMX26_02578 at 2669.670 kb on + strand, within MPMX26_02578 at 2669.679 kb on + strand, within MPMX26_02578 at 2669.679 kb on + strand, within MPMX26_02578 at 2669.679 kb on + strand, within MPMX26_02578 at 2669.720 kb on + strand, within MPMX26_02578 at 2669.722 kb on + strand, within MPMX26_02578 at 2669.730 kb on + strand, within MPMX26_02578
Per-strain Table
Position Strand Gene LocusTag Fraction no UV control remove 2,667,207 - MPMX26_02574 0.78 -0.7 2,667,233 - MPMX26_02574 0.81 -0.2 2,667,253 - MPMX26_02574 0.84 -0.3 2,667,349 - -0.8 2,667,369 - -0.0 2,667,369 - -0.2 2,667,388 - -0.2 2,667,411 - +0.1 2,667,412 - +0.5 2,667,417 - -0.1 2,668,112 - +0.2 2,668,222 - +0.1 2,668,232 - +0.7 2,668,255 - MPMX26_02576 0.10 -0.0 2,668,255 - MPMX26_02576 0.10 +0.5 2,668,255 - MPMX26_02576 0.10 -0.3 2,668,255 - MPMX26_02576 0.10 +0.6 2,668,255 - MPMX26_02576 0.10 -0.1 2,668,255 - MPMX26_02576 0.10 +0.6 2,668,255 - MPMX26_02576 0.10 +0.2 2,668,255 - MPMX26_02576 0.10 +0.4 2,668,447 + MPMX26_02576 0.46 -1.3 2,668,455 - MPMX26_02576 0.48 -0.3 2,668,464 - MPMX26_02576 0.50 +0.1 2,668,465 - MPMX26_02576 0.50 -0.5 2,668,537 - MPMX26_02576 0.63 +0.8 2,668,537 - MPMX26_02576 0.63 +0.8 2,668,539 - MPMX26_02576 0.64 +1.9 2,668,539 - MPMX26_02576 0.64 +1.2 2,668,605 - MPMX26_02576 0.76 +1.5 2,668,642 - MPMX26_02576 0.83 +0.1 2,668,642 - MPMX26_02576 0.83 +0.3 2,668,671 - MPMX26_02576 0.89 +1.5 2,668,671 - MPMX26_02576 0.89 -0.3 2,668,687 - +0.3 2,668,687 - +1.3 2,668,687 - -1.7 2,668,687 - +0.5 2,668,833 - MPMX26_02577 0.13 +0.9 2,668,833 - MPMX26_02577 0.13 +0.6 2,669,085 - MPMX26_02577 0.54 +0.7 2,669,093 + MPMX26_02577 0.56 +0.9 2,669,150 + MPMX26_02577 0.65 -0.5 2,669,204 - MPMX26_02577 0.74 +0.9 2,669,212 - MPMX26_02577 0.75 +0.7 2,669,254 - MPMX26_02577 0.82 +0.5 2,669,265 - MPMX26_02577 0.84 +0.2 2,669,294 - MPMX26_02577 0.89 -0.7 2,669,618 + MPMX26_02578 0.27 -0.6 2,669,618 + MPMX26_02578 0.27 +0.5 2,669,618 + MPMX26_02578 0.27 +0.2 2,669,646 + MPMX26_02578 0.32 -0.9 2,669,660 + MPMX26_02578 0.34 +0.1 2,669,660 + MPMX26_02578 0.34 -1.3 2,669,660 + MPMX26_02578 0.34 -1.6 2,669,670 + MPMX26_02578 0.36 -0.1 2,669,679 + MPMX26_02578 0.37 -0.4 2,669,679 + MPMX26_02578 0.37 -1.3 2,669,679 + MPMX26_02578 0.37 -0.4 2,669,720 + MPMX26_02578 0.44 +0.7 2,669,722 + MPMX26_02578 0.45 +0.1 2,669,730 + MPMX26_02578 0.46 -0.3
Or see this region's nucleotide sequence