Experiment: no UV control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02495 and MPMX26_02496 are separated by 58 nucleotides MPMX26_02496 and MPMX26_02497 are separated by 76 nucleotides MPMX26_02497 and MPMX26_02498 are separated by 102 nucleotides MPMX26_02498 and MPMX26_02499 are separated by 43 nucleotides MPMX26_02499 and MPMX26_02500 are separated by 19 nucleotides MPMX26_02500 and MPMX26_02501 are separated by 45 nucleotides MPMX26_02501 and MPMX26_02502 are separated by 24 nucleotides MPMX26_02502 and MPMX26_02503 are separated by 228 nucleotides
MPMX26_02495: MPMX26_02495 - Acetyl-CoA acetyltransferase, at 2,582,707 to 2,583,882
_02495
MPMX26_02496: MPMX26_02496 - hypothetical protein, at 2,583,941 to 2,584,402
_02496
MPMX26_02497: MPMX26_02497 - tRNA-Val, at 2,584,479 to 2,584,554
_02497
MPMX26_02498: MPMX26_02498 - tRNA-Asp, at 2,584,657 to 2,584,733
_02498
MPMX26_02499: MPMX26_02499 - tRNA-Val, at 2,584,777 to 2,584,852
_02499
MPMX26_02500: MPMX26_02500 - tRNA-Asp, at 2,584,872 to 2,584,948
_02500
MPMX26_02501: MPMX26_02501 - tRNA-Asp, at 2,584,994 to 2,585,070
_02501
MPMX26_02502: MPMX26_02502 - tRNA-Val, at 2,585,095 to 2,585,170
_02502
MPMX26_02503: MPMX26_02503 - hypothetical protein, at 2,585,399 to 2,585,908
_02503
Position (kb)
2584
2585 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2583.506 kb on + strand, within MPMX26_02495 at 2583.507 kb on + strand, within MPMX26_02495 at 2583.562 kb on + strand, within MPMX26_02495 at 2583.598 kb on + strand, within MPMX26_02495 at 2583.598 kb on + strand, within MPMX26_02495 at 2583.628 kb on + strand, within MPMX26_02495 at 2583.667 kb on + strand, within MPMX26_02495 at 2583.667 kb on + strand, within MPMX26_02495 at 2583.690 kb on + strand, within MPMX26_02495 at 2583.798 kb on + strand at 2583.808 kb on + strand at 2583.808 kb on + strand at 2583.819 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2583.852 kb on + strand at 2584.095 kb on - strand, within MPMX26_02496 at 2584.253 kb on - strand, within MPMX26_02496 at 2584.253 kb on - strand, within MPMX26_02496 at 2584.253 kb on - strand, within MPMX26_02496 at 2584.253 kb on - strand, within MPMX26_02496 at 2584.265 kb on - strand, within MPMX26_02496 at 2584.385 kb on - strand at 2584.385 kb on - strand at 2584.395 kb on - strand at 2584.480 kb on - strand at 2584.481 kb on - strand at 2584.481 kb on - strand at 2584.493 kb on - strand, within MPMX26_02497 at 2584.602 kb on - strand at 2584.635 kb on - strand at 2584.681 kb on - strand, within MPMX26_02498 at 2584.681 kb on - strand, within MPMX26_02498 at 2584.681 kb on - strand, within MPMX26_02498 at 2584.779 kb on - strand at 2584.779 kb on - strand at 2584.781 kb on - strand at 2584.781 kb on - strand at 2584.781 kb on - strand at 2584.781 kb on - strand at 2584.781 kb on - strand at 2584.781 kb on - strand at 2584.800 kb on - strand, within MPMX26_02499 at 2585.379 kb on - strand at 2585.424 kb on - strand at 2585.447 kb on - strand at 2585.479 kb on - strand, within MPMX26_02503 at 2585.494 kb on - strand, within MPMX26_02503 at 2585.515 kb on - strand, within MPMX26_02503 at 2585.525 kb on - strand, within MPMX26_02503 at 2585.537 kb on - strand, within MPMX26_02503
Per-strain Table
Position Strand Gene LocusTag Fraction no UV control remove 2,583,506 + MPMX26_02495 0.68 -0.8 2,583,507 + MPMX26_02495 0.68 -1.4 2,583,562 + MPMX26_02495 0.73 +0.5 2,583,598 + MPMX26_02495 0.76 -0.0 2,583,598 + MPMX26_02495 0.76 -0.7 2,583,628 + MPMX26_02495 0.78 +0.5 2,583,667 + MPMX26_02495 0.82 -1.9 2,583,667 + MPMX26_02495 0.82 +1.1 2,583,690 + MPMX26_02495 0.84 -1.1 2,583,798 + -0.4 2,583,808 + +1.8 2,583,808 + -0.3 2,583,819 + -0.1 2,583,852 + +0.2 2,583,852 + +0.9 2,583,852 + -0.0 2,583,852 + -0.5 2,583,852 + -0.3 2,583,852 + -1.0 2,583,852 + +0.6 2,583,852 + +0.4 2,583,852 + +2.5 2,583,852 + +0.6 2,583,852 + +0.2 2,583,852 + -0.9 2,583,852 + -0.9 2,583,852 + -0.5 2,583,852 + +0.1 2,583,852 + +0.3 2,584,095 - MPMX26_02496 0.33 +0.7 2,584,253 - MPMX26_02496 0.68 +0.6 2,584,253 - MPMX26_02496 0.68 -0.3 2,584,253 - MPMX26_02496 0.68 +0.8 2,584,253 - MPMX26_02496 0.68 -0.3 2,584,265 - MPMX26_02496 0.70 -0.5 2,584,385 - -0.6 2,584,385 - +0.6 2,584,395 - +0.9 2,584,480 - +0.1 2,584,481 - +0.5 2,584,481 - -0.2 2,584,493 - MPMX26_02497 0.18 +0.3 2,584,602 - +0.9 2,584,635 - -0.1 2,584,681 - MPMX26_02498 0.31 -1.6 2,584,681 - MPMX26_02498 0.31 -0.4 2,584,681 - MPMX26_02498 0.31 +0.0 2,584,779 - +0.8 2,584,779 - -0.1 2,584,781 - +0.1 2,584,781 - -0.1 2,584,781 - -0.7 2,584,781 - +0.0 2,584,781 - +0.4 2,584,781 - +0.5 2,584,800 - MPMX26_02499 0.30 -1.2 2,585,379 - +2.8 2,585,424 - -1.0 2,585,447 - -2.2 2,585,479 - MPMX26_02503 0.16 +0.6 2,585,494 - MPMX26_02503 0.19 -2.1 2,585,515 - MPMX26_02503 0.23 -0.7 2,585,525 - MPMX26_02503 0.25 -0.3 2,585,537 - MPMX26_02503 0.27 -1.4
Or see this region's nucleotide sequence