Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02472

Experiment: no UV control

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_02471 and MPMX26_02472 are separated by 30 nucleotidesMPMX26_02472 and MPMX26_02473 are separated by 113 nucleotidesMPMX26_02473 and MPMX26_02474 are separated by 111 nucleotides MPMX26_02471: MPMX26_02471 - tRNA-dihydrouridine(16) synthase, at 2,557,143 to 2,558,084 _02471 MPMX26_02472: MPMX26_02472 - hypothetical protein, at 2,558,115 to 2,559,158 _02472 MPMX26_02473: MPMX26_02473 - hypothetical protein, at 2,559,272 to 2,559,886 _02473 MPMX26_02474: MPMX26_02474 - hypothetical protein, at 2,559,998 to 2,560,162 _02474 Position (kb) 2558 2559 2560Strain fitness (log2 ratio) -1 0 1 2at 2557.164 kb on + strandat 2557.170 kb on + strandat 2557.179 kb on + strandat 2557.197 kb on + strandat 2557.206 kb on + strandat 2557.206 kb on + strandat 2557.206 kb on + strandat 2557.206 kb on + strandat 2557.209 kb on + strandat 2557.216 kb on + strandat 2557.216 kb on + strandat 2557.226 kb on + strandat 2557.226 kb on + strandat 2557.226 kb on + strandat 2557.260 kb on + strand, within MPMX26_02471at 2557.260 kb on + strand, within MPMX26_02471at 2557.260 kb on + strand, within MPMX26_02471at 2557.270 kb on + strand, within MPMX26_02471at 2557.275 kb on + strand, within MPMX26_02471at 2557.310 kb on + strand, within MPMX26_02471at 2557.330 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.393 kb on + strand, within MPMX26_02471at 2557.395 kb on + strand, within MPMX26_02471at 2557.395 kb on + strand, within MPMX26_02471at 2557.395 kb on + strand, within MPMX26_02471at 2557.395 kb on + strand, within MPMX26_02471at 2557.395 kb on + strand, within MPMX26_02471at 2557.395 kb on + strand, within MPMX26_02471at 2557.395 kb on + strand, within MPMX26_02471at 2557.398 kb on + strand, within MPMX26_02471at 2557.398 kb on + strand, within MPMX26_02471at 2557.398 kb on + strand, within MPMX26_02471at 2557.398 kb on + strand, within MPMX26_02471at 2557.463 kb on + strand, within MPMX26_02471at 2557.468 kb on + strand, within MPMX26_02471at 2557.468 kb on + strand, within MPMX26_02471at 2557.468 kb on + strand, within MPMX26_02471at 2557.476 kb on + strand, within MPMX26_02471at 2557.481 kb on + strand, within MPMX26_02471at 2557.486 kb on + strand, within MPMX26_02471at 2557.486 kb on + strand, within MPMX26_02471at 2557.486 kb on + strand, within MPMX26_02471at 2557.497 kb on + strand, within MPMX26_02471at 2557.497 kb on + strand, within MPMX26_02471at 2557.508 kb on + strand, within MPMX26_02471at 2557.508 kb on + strand, within MPMX26_02471at 2557.508 kb on + strand, within MPMX26_02471at 2557.518 kb on + strand, within MPMX26_02471at 2557.540 kb on + strand, within MPMX26_02471at 2557.600 kb on + strand, within MPMX26_02471at 2557.617 kb on + strand, within MPMX26_02471at 2557.623 kb on + strand, within MPMX26_02471at 2557.633 kb on + strand, within MPMX26_02471at 2557.641 kb on + strand, within MPMX26_02471at 2557.641 kb on + strand, within MPMX26_02471at 2557.641 kb on + strand, within MPMX26_02471at 2557.641 kb on + strand, within MPMX26_02471at 2557.641 kb on + strand, within MPMX26_02471at 2557.641 kb on + strand, within MPMX26_02471at 2557.652 kb on + strand, within MPMX26_02471at 2557.652 kb on + strand, within MPMX26_02471at 2557.664 kb on + strand, within MPMX26_02471at 2557.666 kb on + strand, within MPMX26_02471at 2557.666 kb on + strand, within MPMX26_02471at 2557.666 kb on + strand, within MPMX26_02471at 2557.666 kb on + strand, within MPMX26_02471at 2557.666 kb on + strand, within MPMX26_02471at 2557.694 kb on + strand, within MPMX26_02471at 2557.713 kb on + strand, within MPMX26_02471at 2557.751 kb on + strand, within MPMX26_02471at 2557.756 kb on + strand, within MPMX26_02471at 2557.767 kb on + strand, within MPMX26_02471at 2557.797 kb on + strand, within MPMX26_02471at 2557.812 kb on + strand, within MPMX26_02471at 2557.828 kb on + strand, within MPMX26_02471at 2557.828 kb on + strand, within MPMX26_02471at 2557.833 kb on + strand, within MPMX26_02471at 2557.833 kb on + strand, within MPMX26_02471at 2557.833 kb on + strand, within MPMX26_02471at 2557.853 kb on + strand, within MPMX26_02471at 2557.869 kb on + strand, within MPMX26_02471at 2557.869 kb on + strand, within MPMX26_02471at 2557.882 kb on + strand, within MPMX26_02471at 2557.890 kb on + strand, within MPMX26_02471at 2557.890 kb on + strand, within MPMX26_02471at 2557.954 kb on + strand, within MPMX26_02471at 2557.966 kb on + strand, within MPMX26_02471at 2557.971 kb on + strand, within MPMX26_02471at 2557.974 kb on - strand, within MPMX26_02471at 2558.059 kb on + strandat 2558.062 kb on + strandat 2558.062 kb on + strandat 2558.062 kb on + strandat 2558.067 kb on + strandat 2558.067 kb on + strandat 2558.067 kb on + strandat 2558.104 kb on + strandat 2558.225 kb on - strand, within MPMX26_02472at 2558.225 kb on - strand, within MPMX26_02472at 2558.225 kb on - strand, within MPMX26_02472at 2558.225 kb on - strand, within MPMX26_02472at 2558.307 kb on - strand, within MPMX26_02472at 2558.307 kb on - strand, within MPMX26_02472at 2558.307 kb on - strand, within MPMX26_02472at 2558.437 kb on - strand, within MPMX26_02472at 2558.607 kb on - strand, within MPMX26_02472at 2558.651 kb on - strand, within MPMX26_02472at 2558.963 kb on - strand, within MPMX26_02472at 2559.349 kb on - strand, within MPMX26_02473at 2559.401 kb on - strand, within MPMX26_02473at 2559.452 kb on + strand, within MPMX26_02473at 2559.503 kb on - strand, within MPMX26_02473at 2559.547 kb on - strand, within MPMX26_02473at 2559.620 kb on - strand, within MPMX26_02473at 2559.620 kb on - strand, within MPMX26_02473at 2559.620 kb on - strand, within MPMX26_02473at 2559.620 kb on - strand, within MPMX26_02473at 2559.620 kb on - strand, within MPMX26_02473at 2559.620 kb on - strand, within MPMX26_02473at 2559.620 kb on - strand, within MPMX26_02473at 2559.715 kb on - strand, within MPMX26_02473at 2559.715 kb on - strand, within MPMX26_02473at 2559.715 kb on - strand, within MPMX26_02473at 2559.728 kb on - strand, within MPMX26_02473at 2559.743 kb on - strand, within MPMX26_02473at 2559.743 kb on - strand, within MPMX26_02473at 2559.758 kb on - strand, within MPMX26_02473at 2559.766 kb on - strand, within MPMX26_02473at 2559.832 kb on - strandat 2560.108 kb on - strand, within MPMX26_02474at 2560.129 kb on - strand, within MPMX26_02474

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction no UV control
remove
2,557,164 + +0.2
2,557,170 + -0.2
2,557,179 + -0.0
2,557,197 + +0.5
2,557,206 + -0.8
2,557,206 + -0.3
2,557,206 + -0.5
2,557,206 + +0.4
2,557,209 + +0.0
2,557,216 + -0.0
2,557,216 + +0.5
2,557,226 + +0.2
2,557,226 + -0.8
2,557,226 + -0.1
2,557,260 + MPMX26_02471 0.12 -0.3
2,557,260 + MPMX26_02471 0.12 -0.3
2,557,260 + MPMX26_02471 0.12 -0.2
2,557,270 + MPMX26_02471 0.13 -0.7
2,557,275 + MPMX26_02471 0.14 +0.5
2,557,310 + MPMX26_02471 0.18 -0.1
2,557,330 + MPMX26_02471 0.20 -1.0
2,557,393 + MPMX26_02471 0.27 -0.1
2,557,393 + MPMX26_02471 0.27 +0.5
2,557,393 + MPMX26_02471 0.27 +0.1
2,557,393 + MPMX26_02471 0.27 -0.8
2,557,393 + MPMX26_02471 0.27 +1.0
2,557,393 + MPMX26_02471 0.27 +1.5
2,557,393 + MPMX26_02471 0.27 -0.7
2,557,393 + MPMX26_02471 0.27 +1.1
2,557,393 + MPMX26_02471 0.27 -0.3
2,557,393 + MPMX26_02471 0.27 -0.9
2,557,393 + MPMX26_02471 0.27 +0.3
2,557,393 + MPMX26_02471 0.27 -0.5
2,557,393 + MPMX26_02471 0.27 -0.4
2,557,393 + MPMX26_02471 0.27 +0.1
2,557,393 + MPMX26_02471 0.27 -0.4
2,557,395 + MPMX26_02471 0.27 +0.2
2,557,395 + MPMX26_02471 0.27 -0.5
2,557,395 + MPMX26_02471 0.27 -0.2
2,557,395 + MPMX26_02471 0.27 -1.0
2,557,395 + MPMX26_02471 0.27 -0.4
2,557,395 + MPMX26_02471 0.27 +0.3
2,557,395 + MPMX26_02471 0.27 -1.0
2,557,398 + MPMX26_02471 0.27 +0.0
2,557,398 + MPMX26_02471 0.27 -0.3
2,557,398 + MPMX26_02471 0.27 +0.0
2,557,398 + MPMX26_02471 0.27 +0.5
2,557,463 + MPMX26_02471 0.34 +0.2
2,557,468 + MPMX26_02471 0.35 -0.6
2,557,468 + MPMX26_02471 0.35 +1.4
2,557,468 + MPMX26_02471 0.35 -0.4
2,557,476 + MPMX26_02471 0.35 -1.3
2,557,481 + MPMX26_02471 0.36 -0.1
2,557,486 + MPMX26_02471 0.36 +0.9
2,557,486 + MPMX26_02471 0.36 +0.5
2,557,486 + MPMX26_02471 0.36 -0.0
2,557,497 + MPMX26_02471 0.38 +0.8
2,557,497 + MPMX26_02471 0.38 +0.2
2,557,508 + MPMX26_02471 0.39 -0.2
2,557,508 + MPMX26_02471 0.39 +0.8
2,557,508 + MPMX26_02471 0.39 +0.4
2,557,518 + MPMX26_02471 0.40 +0.2
2,557,540 + MPMX26_02471 0.42 +0.9
2,557,600 + MPMX26_02471 0.49 +0.9
2,557,617 + MPMX26_02471 0.50 +0.3
2,557,623 + MPMX26_02471 0.51 +0.5
2,557,633 + MPMX26_02471 0.52 +0.7
2,557,641 + MPMX26_02471 0.53 +0.0
2,557,641 + MPMX26_02471 0.53 -0.1
2,557,641 + MPMX26_02471 0.53 -0.2
2,557,641 + MPMX26_02471 0.53 +0.2
2,557,641 + MPMX26_02471 0.53 +0.1
2,557,641 + MPMX26_02471 0.53 -0.0
2,557,652 + MPMX26_02471 0.54 +0.7
2,557,652 + MPMX26_02471 0.54 +0.6
2,557,664 + MPMX26_02471 0.55 +0.4
2,557,666 + MPMX26_02471 0.56 +0.1
2,557,666 + MPMX26_02471 0.56 +2.3
2,557,666 + MPMX26_02471 0.56 +0.4
2,557,666 + MPMX26_02471 0.56 -0.1
2,557,666 + MPMX26_02471 0.56 +0.4
2,557,694 + MPMX26_02471 0.58 +1.5
2,557,713 + MPMX26_02471 0.61 -0.3
2,557,751 + MPMX26_02471 0.65 +0.6
2,557,756 + MPMX26_02471 0.65 -0.4
2,557,767 + MPMX26_02471 0.66 +0.5
2,557,797 + MPMX26_02471 0.69 -0.9
2,557,812 + MPMX26_02471 0.71 -0.4
2,557,828 + MPMX26_02471 0.73 -0.2
2,557,828 + MPMX26_02471 0.73 -0.2
2,557,833 + MPMX26_02471 0.73 +0.1
2,557,833 + MPMX26_02471 0.73 +0.1
2,557,833 + MPMX26_02471 0.73 -1.0
2,557,853 + MPMX26_02471 0.75 +0.4
2,557,869 + MPMX26_02471 0.77 +0.5
2,557,869 + MPMX26_02471 0.77 -0.1
2,557,882 + MPMX26_02471 0.78 +0.3
2,557,890 + MPMX26_02471 0.79 +0.2
2,557,890 + MPMX26_02471 0.79 -0.4
2,557,954 + MPMX26_02471 0.86 +0.4
2,557,966 + MPMX26_02471 0.87 +1.3
2,557,971 + MPMX26_02471 0.88 -0.8
2,557,974 - MPMX26_02471 0.88 +0.3
2,558,059 + -0.2
2,558,062 + -1.1
2,558,062 + +0.4
2,558,062 + -0.6
2,558,067 + -1.0
2,558,067 + -0.6
2,558,067 + +0.1
2,558,104 + -0.3
2,558,225 - MPMX26_02472 0.11 +0.2
2,558,225 - MPMX26_02472 0.11 +0.9
2,558,225 - MPMX26_02472 0.11 -0.7
2,558,225 - MPMX26_02472 0.11 +0.0
2,558,307 - MPMX26_02472 0.18 +1.2
2,558,307 - MPMX26_02472 0.18 +0.5
2,558,307 - MPMX26_02472 0.18 -0.3
2,558,437 - MPMX26_02472 0.31 -0.5
2,558,607 - MPMX26_02472 0.47 -0.7
2,558,651 - MPMX26_02472 0.51 +2.5
2,558,963 - MPMX26_02472 0.81 +2.3
2,559,349 - MPMX26_02473 0.13 +0.9
2,559,401 - MPMX26_02473 0.21 -0.1
2,559,452 + MPMX26_02473 0.29 -0.9
2,559,503 - MPMX26_02473 0.38 +1.2
2,559,547 - MPMX26_02473 0.45 -1.6
2,559,620 - MPMX26_02473 0.57 +1.9
2,559,620 - MPMX26_02473 0.57 +0.4
2,559,620 - MPMX26_02473 0.57 +0.0
2,559,620 - MPMX26_02473 0.57 +0.1
2,559,620 - MPMX26_02473 0.57 -1.4
2,559,620 - MPMX26_02473 0.57 +1.1
2,559,620 - MPMX26_02473 0.57 +0.5
2,559,715 - MPMX26_02473 0.72 +0.9
2,559,715 - MPMX26_02473 0.72 +1.3
2,559,715 - MPMX26_02473 0.72 -1.5
2,559,728 - MPMX26_02473 0.74 +0.5
2,559,743 - MPMX26_02473 0.77 -0.8
2,559,743 - MPMX26_02473 0.77 +0.9
2,559,758 - MPMX26_02473 0.79 -0.3
2,559,766 - MPMX26_02473 0.80 +0.0
2,559,832 - +0.2
2,560,108 - MPMX26_02474 0.67 -0.9
2,560,129 - MPMX26_02474 0.79 -0.3

Or see this region's nucleotide sequence