Experiment: no UV control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02443 and MPMX26_02444 are separated by 73 nucleotides MPMX26_02444 and MPMX26_02445 are separated by 97 nucleotides MPMX26_02445 and MPMX26_02446 are separated by 94 nucleotides MPMX26_02446 and MPMX26_02447 are separated by 74 nucleotides
MPMX26_02443: MPMX26_02443 - 50S ribosomal protein L32, at 2,528,408 to 2,528,593
_02443
MPMX26_02444: MPMX26_02444 - Large ribosomal RNA subunit accumulation protein YceD, at 2,528,667 to 2,529,224
_02444
MPMX26_02445: MPMX26_02445 - hypothetical protein, at 2,529,322 to 2,529,984
_02445
MPMX26_02446: MPMX26_02446 - putative protein YciO, at 2,530,079 to 2,530,696
_02446
MPMX26_02447: MPMX26_02447 - hypothetical protein, at 2,530,771 to 2,531,040
_02447
Position (kb)
2529
2530 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2528.744 kb on - strand, within MPMX26_02444 at 2529.298 kb on - strand at 2529.298 kb on - strand at 2529.317 kb on - strand at 2529.317 kb on - strand at 2529.327 kb on - strand at 2529.350 kb on - strand at 2529.386 kb on - strand at 2529.386 kb on - strand at 2529.401 kb on - strand, within MPMX26_02445 at 2529.420 kb on - strand, within MPMX26_02445 at 2529.438 kb on + strand, within MPMX26_02445 at 2529.441 kb on - strand, within MPMX26_02445 at 2529.443 kb on + strand, within MPMX26_02445 at 2529.446 kb on - strand, within MPMX26_02445 at 2529.446 kb on - strand, within MPMX26_02445 at 2529.498 kb on + strand, within MPMX26_02445 at 2529.498 kb on + strand, within MPMX26_02445 at 2529.498 kb on + strand, within MPMX26_02445 at 2529.498 kb on + strand, within MPMX26_02445 at 2529.513 kb on + strand, within MPMX26_02445 at 2529.555 kb on + strand, within MPMX26_02445 at 2529.570 kb on + strand, within MPMX26_02445 at 2529.666 kb on - strand, within MPMX26_02445 at 2529.671 kb on + strand, within MPMX26_02445 at 2529.684 kb on - strand, within MPMX26_02445 at 2529.700 kb on + strand, within MPMX26_02445 at 2529.720 kb on + strand, within MPMX26_02445 at 2529.720 kb on + strand, within MPMX26_02445 at 2529.720 kb on + strand, within MPMX26_02445 at 2529.720 kb on + strand, within MPMX26_02445 at 2529.740 kb on + strand, within MPMX26_02445 at 2529.841 kb on + strand, within MPMX26_02445 at 2529.847 kb on + strand, within MPMX26_02445 at 2529.847 kb on + strand, within MPMX26_02445 at 2529.853 kb on + strand, within MPMX26_02445 at 2529.916 kb on + strand, within MPMX26_02445 at 2530.092 kb on + strand at 2530.120 kb on + strand at 2530.120 kb on + strand at 2530.158 kb on + strand, within MPMX26_02446 at 2530.165 kb on + strand, within MPMX26_02446 at 2530.165 kb on + strand, within MPMX26_02446 at 2530.165 kb on + strand, within MPMX26_02446 at 2530.165 kb on + strand, within MPMX26_02446 at 2530.165 kb on + strand, within MPMX26_02446 at 2530.168 kb on + strand, within MPMX26_02446 at 2530.170 kb on + strand, within MPMX26_02446 at 2530.225 kb on + strand, within MPMX26_02446 at 2530.230 kb on + strand, within MPMX26_02446 at 2530.235 kb on + strand, within MPMX26_02446 at 2530.262 kb on + strand, within MPMX26_02446 at 2530.281 kb on + strand, within MPMX26_02446 at 2530.304 kb on + strand, within MPMX26_02446 at 2530.402 kb on + strand, within MPMX26_02446 at 2530.498 kb on + strand, within MPMX26_02446 at 2530.510 kb on + strand, within MPMX26_02446 at 2530.537 kb on + strand, within MPMX26_02446 at 2530.592 kb on + strand, within MPMX26_02446 at 2530.667 kb on + strand at 2530.673 kb on + strand at 2530.678 kb on + strand at 2530.678 kb on + strand at 2530.734 kb on + strand at 2530.829 kb on + strand, within MPMX26_02447 at 2530.839 kb on + strand, within MPMX26_02447 at 2530.897 kb on + strand, within MPMX26_02447
Per-strain Table
Position Strand Gene LocusTag Fraction no UV control remove 2,528,744 - MPMX26_02444 0.14 +0.2 2,529,298 - +0.4 2,529,298 - +0.4 2,529,317 - -0.3 2,529,317 - -0.9 2,529,327 - +0.4 2,529,350 - -0.7 2,529,386 - -1.5 2,529,386 - +0.6 2,529,401 - MPMX26_02445 0.12 +0.2 2,529,420 - MPMX26_02445 0.15 -0.4 2,529,438 + MPMX26_02445 0.17 +0.2 2,529,441 - MPMX26_02445 0.18 +1.1 2,529,443 + MPMX26_02445 0.18 +1.1 2,529,446 - MPMX26_02445 0.19 -0.4 2,529,446 - MPMX26_02445 0.19 -0.1 2,529,498 + MPMX26_02445 0.27 -1.1 2,529,498 + MPMX26_02445 0.27 -0.5 2,529,498 + MPMX26_02445 0.27 -0.2 2,529,498 + MPMX26_02445 0.27 +0.1 2,529,513 + MPMX26_02445 0.29 -0.1 2,529,555 + MPMX26_02445 0.35 -1.0 2,529,570 + MPMX26_02445 0.37 -0.1 2,529,666 - MPMX26_02445 0.52 -0.1 2,529,671 + MPMX26_02445 0.53 -1.5 2,529,684 - MPMX26_02445 0.55 +2.1 2,529,700 + MPMX26_02445 0.57 -0.1 2,529,720 + MPMX26_02445 0.60 +0.9 2,529,720 + MPMX26_02445 0.60 -0.1 2,529,720 + MPMX26_02445 0.60 +0.7 2,529,720 + MPMX26_02445 0.60 +0.1 2,529,740 + MPMX26_02445 0.63 +2.8 2,529,841 + MPMX26_02445 0.78 -1.2 2,529,847 + MPMX26_02445 0.79 +0.1 2,529,847 + MPMX26_02445 0.79 -0.3 2,529,853 + MPMX26_02445 0.80 +0.2 2,529,916 + MPMX26_02445 0.90 -0.1 2,530,092 + +0.5 2,530,120 + -0.1 2,530,120 + +0.2 2,530,158 + MPMX26_02446 0.13 +0.2 2,530,165 + MPMX26_02446 0.14 -0.3 2,530,165 + MPMX26_02446 0.14 +0.3 2,530,165 + MPMX26_02446 0.14 -0.5 2,530,165 + MPMX26_02446 0.14 +0.1 2,530,165 + MPMX26_02446 0.14 +0.2 2,530,168 + MPMX26_02446 0.14 -1.0 2,530,170 + MPMX26_02446 0.15 -0.3 2,530,225 + MPMX26_02446 0.24 -1.1 2,530,230 + MPMX26_02446 0.24 -1.7 2,530,235 + MPMX26_02446 0.25 -0.0 2,530,262 + MPMX26_02446 0.30 -0.6 2,530,281 + MPMX26_02446 0.33 +0.2 2,530,304 + MPMX26_02446 0.36 +0.3 2,530,402 + MPMX26_02446 0.52 +0.4 2,530,498 + MPMX26_02446 0.68 +1.3 2,530,510 + MPMX26_02446 0.70 +0.0 2,530,537 + MPMX26_02446 0.74 +0.1 2,530,592 + MPMX26_02446 0.83 +0.3 2,530,667 + +0.9 2,530,673 + -0.4 2,530,678 + +0.5 2,530,678 + +0.4 2,530,734 + -0.2 2,530,829 + MPMX26_02447 0.21 +0.0 2,530,839 + MPMX26_02447 0.25 +0.7 2,530,897 + MPMX26_02447 0.47 +0.5
Or see this region's nucleotide sequence