Experiment: no UV control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02199 and MPMX26_02200 overlap by 8 nucleotides MPMX26_02200 and MPMX26_02201 overlap by 11 nucleotides MPMX26_02201 and MPMX26_02202 are separated by 47 nucleotides
MPMX26_02199: MPMX26_02199 - hypothetical protein, at 2,254,708 to 2,255,349
_02199
MPMX26_02200: MPMX26_02200 - hypothetical protein, at 2,255,342 to 2,255,662
_02200
MPMX26_02201: MPMX26_02201 - hypothetical protein, at 2,255,652 to 2,256,059
_02201
MPMX26_02202: MPMX26_02202 - hypothetical protein, at 2,256,107 to 2,258,512
_02202
Position (kb)
2255
2256
2257 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2254.764 kb on + strand at 2254.789 kb on + strand, within MPMX26_02199 at 2255.392 kb on + strand, within MPMX26_02200 at 2255.407 kb on + strand, within MPMX26_02200 at 2255.407 kb on + strand, within MPMX26_02200 at 2255.407 kb on + strand, within MPMX26_02200 at 2255.407 kb on + strand, within MPMX26_02200 at 2255.407 kb on + strand, within MPMX26_02200 at 2255.407 kb on + strand, within MPMX26_02200 at 2255.420 kb on + strand, within MPMX26_02200 at 2255.422 kb on + strand, within MPMX26_02200 at 2255.434 kb on + strand, within MPMX26_02200 at 2255.434 kb on + strand, within MPMX26_02200 at 2255.442 kb on + strand, within MPMX26_02200 at 2255.460 kb on + strand, within MPMX26_02200 at 2255.462 kb on + strand, within MPMX26_02200 at 2255.530 kb on + strand, within MPMX26_02200 at 2255.530 kb on + strand, within MPMX26_02200 at 2255.535 kb on + strand, within MPMX26_02200 at 2255.536 kb on + strand, within MPMX26_02200 at 2255.574 kb on + strand, within MPMX26_02200 at 2255.574 kb on + strand, within MPMX26_02200 at 2255.602 kb on + strand, within MPMX26_02200 at 2255.626 kb on + strand, within MPMX26_02200 at 2255.626 kb on + strand, within MPMX26_02200 at 2255.633 kb on + strand at 2255.633 kb on + strand at 2255.638 kb on + strand at 2255.638 kb on + strand at 2255.638 kb on + strand at 2255.638 kb on + strand at 2255.638 kb on + strand at 2255.638 kb on + strand at 2255.638 kb on + strand at 2255.638 kb on + strand at 2255.638 kb on + strand at 2255.638 kb on + strand at 2255.638 kb on + strand at 2255.638 kb on + strand at 2255.638 kb on + strand at 2255.638 kb on + strand at 2255.638 kb on + strand at 2255.638 kb on + strand at 2255.638 kb on + strand at 2255.638 kb on + strand at 2255.638 kb on + strand at 2255.646 kb on - strand at 2255.648 kb on + strand at 2255.707 kb on + strand, within MPMX26_02201 at 2255.716 kb on + strand, within MPMX26_02201 at 2255.717 kb on + strand, within MPMX26_02201 at 2255.717 kb on + strand, within MPMX26_02201 at 2255.717 kb on + strand, within MPMX26_02201 at 2255.717 kb on + strand, within MPMX26_02201 at 2255.717 kb on + strand, within MPMX26_02201 at 2255.717 kb on + strand, within MPMX26_02201 at 2255.807 kb on + strand, within MPMX26_02201 at 2255.807 kb on + strand, within MPMX26_02201 at 2255.807 kb on + strand, within MPMX26_02201 at 2255.851 kb on + strand, within MPMX26_02201 at 2255.859 kb on + strand, within MPMX26_02201 at 2255.878 kb on + strand, within MPMX26_02201 at 2255.878 kb on + strand, within MPMX26_02201 at 2255.878 kb on + strand, within MPMX26_02201 at 2255.878 kb on + strand, within MPMX26_02201 at 2255.923 kb on + strand, within MPMX26_02201 at 2255.941 kb on + strand, within MPMX26_02201 at 2255.986 kb on + strand, within MPMX26_02201 at 2255.986 kb on + strand, within MPMX26_02201 at 2256.015 kb on + strand, within MPMX26_02201 at 2256.015 kb on + strand, within MPMX26_02201 at 2256.029 kb on + strand at 2256.037 kb on + strand at 2256.044 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no UV control remove 2,254,764 + +0.2 2,254,789 + MPMX26_02199 0.13 +1.6 2,255,392 + MPMX26_02200 0.16 -0.3 2,255,407 + MPMX26_02200 0.20 -0.4 2,255,407 + MPMX26_02200 0.20 -1.0 2,255,407 + MPMX26_02200 0.20 -0.0 2,255,407 + MPMX26_02200 0.20 -0.5 2,255,407 + MPMX26_02200 0.20 +1.6 2,255,407 + MPMX26_02200 0.20 -1.4 2,255,420 + MPMX26_02200 0.24 +0.4 2,255,422 + MPMX26_02200 0.25 +1.4 2,255,434 + MPMX26_02200 0.29 +0.4 2,255,434 + MPMX26_02200 0.29 +1.3 2,255,442 + MPMX26_02200 0.31 -0.7 2,255,460 + MPMX26_02200 0.37 +0.2 2,255,462 + MPMX26_02200 0.37 -0.3 2,255,530 + MPMX26_02200 0.59 +2.0 2,255,530 + MPMX26_02200 0.59 -0.3 2,255,535 + MPMX26_02200 0.60 +1.0 2,255,536 + MPMX26_02200 0.60 -0.2 2,255,574 + MPMX26_02200 0.72 -0.8 2,255,574 + MPMX26_02200 0.72 -0.3 2,255,602 + MPMX26_02200 0.81 -1.3 2,255,626 + MPMX26_02200 0.88 -0.3 2,255,626 + MPMX26_02200 0.88 +0.4 2,255,633 + -0.4 2,255,633 + +0.2 2,255,638 + +0.2 2,255,638 + +0.6 2,255,638 + +0.1 2,255,638 + +0.1 2,255,638 + +1.0 2,255,638 + +0.4 2,255,638 + +0.4 2,255,638 + +0.7 2,255,638 + +0.9 2,255,638 + +0.6 2,255,638 + +0.6 2,255,638 + -0.3 2,255,638 + +2.1 2,255,638 + -1.4 2,255,638 + -0.3 2,255,638 + +0.4 2,255,638 + +0.1 2,255,638 + -0.6 2,255,638 + +1.1 2,255,646 - +0.4 2,255,648 + -0.0 2,255,707 + MPMX26_02201 0.13 +0.1 2,255,716 + MPMX26_02201 0.16 -2.2 2,255,717 + MPMX26_02201 0.16 +0.4 2,255,717 + MPMX26_02201 0.16 +0.2 2,255,717 + MPMX26_02201 0.16 -0.6 2,255,717 + MPMX26_02201 0.16 -0.8 2,255,717 + MPMX26_02201 0.16 -0.2 2,255,717 + MPMX26_02201 0.16 -0.6 2,255,807 + MPMX26_02201 0.38 -0.3 2,255,807 + MPMX26_02201 0.38 -1.1 2,255,807 + MPMX26_02201 0.38 -0.8 2,255,851 + MPMX26_02201 0.49 -2.8 2,255,859 + MPMX26_02201 0.51 -1.0 2,255,878 + MPMX26_02201 0.55 -2.3 2,255,878 + MPMX26_02201 0.55 -1.0 2,255,878 + MPMX26_02201 0.55 -1.0 2,255,878 + MPMX26_02201 0.55 -0.8 2,255,923 + MPMX26_02201 0.66 -0.3 2,255,941 + MPMX26_02201 0.71 -1.7 2,255,986 + MPMX26_02201 0.82 -0.6 2,255,986 + MPMX26_02201 0.82 +0.1 2,256,015 + MPMX26_02201 0.89 -0.2 2,256,015 + MPMX26_02201 0.89 -0.8 2,256,029 + -0.1 2,256,037 + +0.2 2,256,044 + +0.2
Or see this region's nucleotide sequence