Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02127

Experiment: no UV control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02126 and MPMX26_02127 are separated by 56 nucleotidesMPMX26_02127 and MPMX26_02128 are separated by 497 nucleotides MPMX26_02126: MPMX26_02126 - Nitronate monooxygenase, at 2,181,383 to 2,182,444 _02126 MPMX26_02127: MPMX26_02127 - tRNA-dihydrouridine synthase B, at 2,182,501 to 2,183,544 _02127 MPMX26_02128: MPMX26_02128 - hypothetical protein, at 2,184,042 to 2,184,224 _02128 Position (kb) 2182 2183 2184Strain fitness (log2 ratio) -1 0 1 2at 2181.507 kb on - strand, within MPMX26_02126at 2181.548 kb on + strand, within MPMX26_02126at 2182.076 kb on + strand, within MPMX26_02126at 2182.084 kb on + strand, within MPMX26_02126at 2182.084 kb on + strand, within MPMX26_02126at 2182.207 kb on + strand, within MPMX26_02126at 2182.207 kb on + strand, within MPMX26_02126at 2182.315 kb on + strand, within MPMX26_02126at 2182.315 kb on + strand, within MPMX26_02126at 2182.327 kb on + strand, within MPMX26_02126at 2182.336 kb on + strand, within MPMX26_02126at 2182.531 kb on - strandat 2182.551 kb on - strandat 2182.612 kb on - strand, within MPMX26_02127at 2182.674 kb on - strand, within MPMX26_02127at 2182.680 kb on - strand, within MPMX26_02127at 2182.773 kb on - strand, within MPMX26_02127at 2182.794 kb on - strand, within MPMX26_02127at 2182.845 kb on - strand, within MPMX26_02127at 2182.845 kb on - strand, within MPMX26_02127at 2182.845 kb on - strand, within MPMX26_02127at 2182.845 kb on - strand, within MPMX26_02127at 2182.845 kb on - strand, within MPMX26_02127at 2182.845 kb on - strand, within MPMX26_02127at 2182.845 kb on - strand, within MPMX26_02127at 2182.845 kb on - strand, within MPMX26_02127at 2182.845 kb on - strand, within MPMX26_02127at 2182.845 kb on - strand, within MPMX26_02127at 2182.845 kb on - strand, within MPMX26_02127at 2182.845 kb on - strand, within MPMX26_02127at 2182.845 kb on - strand, within MPMX26_02127at 2182.845 kb on - strand, within MPMX26_02127at 2182.845 kb on - strand, within MPMX26_02127at 2182.845 kb on - strand, within MPMX26_02127at 2182.845 kb on - strand, within MPMX26_02127at 2182.845 kb on - strand, within MPMX26_02127at 2182.845 kb on - strand, within MPMX26_02127at 2182.845 kb on - strand, within MPMX26_02127at 2182.845 kb on - strand, within MPMX26_02127at 2182.845 kb on - strand, within MPMX26_02127at 2183.007 kb on - strand, within MPMX26_02127at 2183.025 kb on - strand, within MPMX26_02127at 2183.025 kb on - strand, within MPMX26_02127at 2183.025 kb on - strand, within MPMX26_02127at 2183.025 kb on - strand, within MPMX26_02127at 2183.026 kb on - strand, within MPMX26_02127at 2183.026 kb on - strand, within MPMX26_02127at 2183.026 kb on - strand, within MPMX26_02127at 2183.044 kb on - strand, within MPMX26_02127at 2183.049 kb on - strand, within MPMX26_02127at 2183.305 kb on - strand, within MPMX26_02127at 2183.394 kb on - strand, within MPMX26_02127at 2183.421 kb on - strand, within MPMX26_02127at 2183.452 kb on - strandat 2183.532 kb on - strandat 2183.963 kb on + strandat 2184.030 kb on - strandat 2184.094 kb on - strand, within MPMX26_02128at 2184.149 kb on - strand, within MPMX26_02128

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Per-strain Table

Position Strand Gene LocusTag Fraction no UV control
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2,181,507 - MPMX26_02126 0.12 +0.8
2,181,548 + MPMX26_02126 0.16 +0.4
2,182,076 + MPMX26_02126 0.65 +1.5
2,182,084 + MPMX26_02126 0.66 +0.5
2,182,084 + MPMX26_02126 0.66 +0.5
2,182,207 + MPMX26_02126 0.78 +1.2
2,182,207 + MPMX26_02126 0.78 +0.1
2,182,315 + MPMX26_02126 0.88 +0.6
2,182,315 + MPMX26_02126 0.88 +0.7
2,182,327 + MPMX26_02126 0.89 +1.0
2,182,336 + MPMX26_02126 0.90 -0.3
2,182,531 - -0.1
2,182,551 - +0.5
2,182,612 - MPMX26_02127 0.11 +0.3
2,182,674 - MPMX26_02127 0.17 -1.1
2,182,680 - MPMX26_02127 0.17 -1.0
2,182,773 - MPMX26_02127 0.26 -0.0
2,182,794 - MPMX26_02127 0.28 +0.8
2,182,845 - MPMX26_02127 0.33 -0.9
2,182,845 - MPMX26_02127 0.33 -0.1
2,182,845 - MPMX26_02127 0.33 +0.2
2,182,845 - MPMX26_02127 0.33 -0.8
2,182,845 - MPMX26_02127 0.33 +0.1
2,182,845 - MPMX26_02127 0.33 +0.1
2,182,845 - MPMX26_02127 0.33 -0.6
2,182,845 - MPMX26_02127 0.33 +0.2
2,182,845 - MPMX26_02127 0.33 +0.4
2,182,845 - MPMX26_02127 0.33 +2.0
2,182,845 - MPMX26_02127 0.33 +0.3
2,182,845 - MPMX26_02127 0.33 -0.0
2,182,845 - MPMX26_02127 0.33 +0.2
2,182,845 - MPMX26_02127 0.33 +0.1
2,182,845 - MPMX26_02127 0.33 +1.5
2,182,845 - MPMX26_02127 0.33 -0.3
2,182,845 - MPMX26_02127 0.33 +0.6
2,182,845 - MPMX26_02127 0.33 -0.9
2,182,845 - MPMX26_02127 0.33 -0.7
2,182,845 - MPMX26_02127 0.33 +0.3
2,182,845 - MPMX26_02127 0.33 -0.7
2,182,845 - MPMX26_02127 0.33 -0.1
2,183,007 - MPMX26_02127 0.48 -0.6
2,183,025 - MPMX26_02127 0.50 -0.0
2,183,025 - MPMX26_02127 0.50 +0.8
2,183,025 - MPMX26_02127 0.50 -0.8
2,183,025 - MPMX26_02127 0.50 +0.5
2,183,026 - MPMX26_02127 0.50 +0.4
2,183,026 - MPMX26_02127 0.50 -0.3
2,183,026 - MPMX26_02127 0.50 +0.5
2,183,044 - MPMX26_02127 0.52 -0.2
2,183,049 - MPMX26_02127 0.52 -0.0
2,183,305 - MPMX26_02127 0.77 -0.0
2,183,394 - MPMX26_02127 0.86 -0.8
2,183,421 - MPMX26_02127 0.88 -0.5
2,183,452 - -0.5
2,183,532 - +1.1
2,183,963 + +0.5
2,184,030 - -0.0
2,184,094 - MPMX26_02128 0.28 -0.0
2,184,149 - MPMX26_02128 0.58 +0.1

Or see this region's nucleotide sequence