Experiment: no UV control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02005 and MPMX26_02006 are separated by 249 nucleotides MPMX26_02006 and MPMX26_02007 are separated by 94 nucleotides
MPMX26_02005: MPMX26_02005 - hypothetical protein, at 2,066,845 to 2,068,092
_02005
MPMX26_02006: MPMX26_02006 - HTH-type transcriptional regulatory protein GabR, at 2,068,342 to 2,069,829
_02006
MPMX26_02007: MPMX26_02007 - Beta-ketodecanoyl-[acyl-carrier-protein] synthase, at 2,069,924 to 2,071,033
_02007
Position (kb)
2068
2069
2070 Strain fitness (log2 ratio)
-2
-1
0
1 at 2068.045 kb on - strand at 2068.226 kb on - strand at 2069.801 kb on + strand at 2069.857 kb on + strand at 2069.898 kb on - strand at 2069.898 kb on - strand at 2069.898 kb on - strand at 2069.906 kb on - strand at 2069.952 kb on - strand at 2069.955 kb on - strand at 2069.964 kb on - strand at 2069.989 kb on - strand at 2070.029 kb on - strand at 2070.029 kb on - strand at 2070.034 kb on - strand at 2070.049 kb on - strand, within MPMX26_02007 at 2070.098 kb on - strand, within MPMX26_02007 at 2070.125 kb on - strand, within MPMX26_02007 at 2070.163 kb on - strand, within MPMX26_02007 at 2070.163 kb on - strand, within MPMX26_02007 at 2070.163 kb on - strand, within MPMX26_02007 at 2070.163 kb on - strand, within MPMX26_02007 at 2070.163 kb on - strand, within MPMX26_02007 at 2070.163 kb on - strand, within MPMX26_02007 at 2070.163 kb on - strand, within MPMX26_02007 at 2070.168 kb on - strand, within MPMX26_02007 at 2070.168 kb on - strand, within MPMX26_02007 at 2070.198 kb on - strand, within MPMX26_02007 at 2070.198 kb on - strand, within MPMX26_02007 at 2070.259 kb on - strand, within MPMX26_02007 at 2070.297 kb on - strand, within MPMX26_02007 at 2070.369 kb on - strand, within MPMX26_02007 at 2070.510 kb on - strand, within MPMX26_02007 at 2070.520 kb on - strand, within MPMX26_02007 at 2070.530 kb on - strand, within MPMX26_02007 at 2070.530 kb on - strand, within MPMX26_02007 at 2070.530 kb on - strand, within MPMX26_02007 at 2070.567 kb on - strand, within MPMX26_02007 at 2070.570 kb on - strand, within MPMX26_02007 at 2070.570 kb on - strand, within MPMX26_02007 at 2070.575 kb on - strand, within MPMX26_02007 at 2070.604 kb on - strand, within MPMX26_02007 at 2070.613 kb on - strand, within MPMX26_02007 at 2070.613 kb on - strand, within MPMX26_02007 at 2070.653 kb on - strand, within MPMX26_02007 at 2070.663 kb on - strand, within MPMX26_02007 at 2070.663 kb on - strand, within MPMX26_02007 at 2070.663 kb on - strand, within MPMX26_02007 at 2070.694 kb on - strand, within MPMX26_02007 at 2070.694 kb on - strand, within MPMX26_02007 at 2070.696 kb on - strand, within MPMX26_02007 at 2070.749 kb on - strand, within MPMX26_02007
Per-strain Table
Position Strand Gene LocusTag Fraction no UV control remove 2,068,045 - -0.2 2,068,226 - -2.1 2,069,801 + -1.0 2,069,857 + +0.5 2,069,898 - -1.7 2,069,898 - +1.0 2,069,898 - -0.5 2,069,906 - -0.5 2,069,952 - +0.4 2,069,955 - -0.6 2,069,964 - -0.6 2,069,989 - -0.2 2,070,029 - -1.2 2,070,029 - -0.4 2,070,034 - -0.3 2,070,049 - MPMX26_02007 0.11 +0.1 2,070,098 - MPMX26_02007 0.16 +0.5 2,070,125 - MPMX26_02007 0.18 +0.3 2,070,163 - MPMX26_02007 0.22 -1.1 2,070,163 - MPMX26_02007 0.22 -0.5 2,070,163 - MPMX26_02007 0.22 +0.3 2,070,163 - MPMX26_02007 0.22 +0.3 2,070,163 - MPMX26_02007 0.22 -1.5 2,070,163 - MPMX26_02007 0.22 +0.4 2,070,163 - MPMX26_02007 0.22 -0.4 2,070,168 - MPMX26_02007 0.22 +0.5 2,070,168 - MPMX26_02007 0.22 -0.6 2,070,198 - MPMX26_02007 0.25 +0.3 2,070,198 - MPMX26_02007 0.25 -1.4 2,070,259 - MPMX26_02007 0.30 -1.1 2,070,297 - MPMX26_02007 0.34 +1.7 2,070,369 - MPMX26_02007 0.40 +0.7 2,070,510 - MPMX26_02007 0.53 +0.1 2,070,520 - MPMX26_02007 0.54 +0.9 2,070,530 - MPMX26_02007 0.55 -0.1 2,070,530 - MPMX26_02007 0.55 +0.3 2,070,530 - MPMX26_02007 0.55 +0.2 2,070,567 - MPMX26_02007 0.58 +1.1 2,070,570 - MPMX26_02007 0.58 +0.2 2,070,570 - MPMX26_02007 0.58 -0.2 2,070,575 - MPMX26_02007 0.59 +0.4 2,070,604 - MPMX26_02007 0.61 -0.4 2,070,613 - MPMX26_02007 0.62 -0.8 2,070,613 - MPMX26_02007 0.62 +0.2 2,070,653 - MPMX26_02007 0.66 -0.4 2,070,663 - MPMX26_02007 0.67 -0.6 2,070,663 - MPMX26_02007 0.67 +1.3 2,070,663 - MPMX26_02007 0.67 +0.5 2,070,694 - MPMX26_02007 0.69 -0.7 2,070,694 - MPMX26_02007 0.69 +0.4 2,070,696 - MPMX26_02007 0.70 +0.6 2,070,749 - MPMX26_02007 0.74 -0.0
Or see this region's nucleotide sequence