Experiment: no UV control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01750 and MPMX26_01751 are separated by 228 nucleotides MPMX26_01751 and MPMX26_01752 are separated by 87 nucleotides
MPMX26_01750: MPMX26_01750 - 3-ketoacyl-CoA thiolase FadI, at 1,807,562 to 1,809,052
_01750
MPMX26_01751: MPMX26_01751 - hypothetical protein, at 1,809,281 to 1,809,706
_01751
MPMX26_01752: MPMX26_01752 - hypothetical protein, at 1,809,794 to 1,810,681
_01752
Position (kb)
1809
1810 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1808.296 kb on + strand, within MPMX26_01750 at 1808.296 kb on + strand, within MPMX26_01750 at 1808.303 kb on + strand, within MPMX26_01750 at 1808.425 kb on + strand, within MPMX26_01750 at 1808.425 kb on + strand, within MPMX26_01750 at 1808.432 kb on + strand, within MPMX26_01750 at 1808.518 kb on + strand, within MPMX26_01750 at 1808.518 kb on + strand, within MPMX26_01750 at 1808.518 kb on + strand, within MPMX26_01750 at 1808.518 kb on + strand, within MPMX26_01750 at 1808.519 kb on + strand, within MPMX26_01750 at 1808.519 kb on + strand, within MPMX26_01750 at 1808.528 kb on + strand, within MPMX26_01750 at 1808.531 kb on + strand, within MPMX26_01750 at 1808.624 kb on + strand, within MPMX26_01750 at 1808.624 kb on + strand, within MPMX26_01750 at 1808.633 kb on + strand, within MPMX26_01750 at 1808.687 kb on + strand, within MPMX26_01750 at 1808.692 kb on + strand, within MPMX26_01750 at 1808.701 kb on + strand, within MPMX26_01750 at 1808.701 kb on + strand, within MPMX26_01750 at 1808.711 kb on + strand, within MPMX26_01750 at 1808.711 kb on + strand, within MPMX26_01750 at 1808.711 kb on + strand, within MPMX26_01750 at 1808.722 kb on + strand, within MPMX26_01750 at 1808.839 kb on + strand, within MPMX26_01750 at 1809.017 kb on + strand at 1809.025 kb on + strand at 1809.025 kb on + strand at 1809.425 kb on - strand, within MPMX26_01751 at 1809.583 kb on + strand, within MPMX26_01751 at 1809.962 kb on + strand, within MPMX26_01752 at 1810.073 kb on + strand, within MPMX26_01752 at 1810.097 kb on + strand, within MPMX26_01752 at 1810.139 kb on + strand, within MPMX26_01752 at 1810.310 kb on + strand, within MPMX26_01752 at 1810.624 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction no UV control remove 1,808,296 + MPMX26_01750 0.49 +0.3 1,808,296 + MPMX26_01750 0.49 +0.4 1,808,303 + MPMX26_01750 0.50 -2.5 1,808,425 + MPMX26_01750 0.58 -0.7 1,808,425 + MPMX26_01750 0.58 -1.1 1,808,432 + MPMX26_01750 0.58 -0.0 1,808,518 + MPMX26_01750 0.64 -0.3 1,808,518 + MPMX26_01750 0.64 +0.3 1,808,518 + MPMX26_01750 0.64 -0.4 1,808,518 + MPMX26_01750 0.64 +0.5 1,808,519 + MPMX26_01750 0.64 -1.0 1,808,519 + MPMX26_01750 0.64 +2.5 1,808,528 + MPMX26_01750 0.65 +0.2 1,808,531 + MPMX26_01750 0.65 +0.0 1,808,624 + MPMX26_01750 0.71 +0.4 1,808,624 + MPMX26_01750 0.71 +0.9 1,808,633 + MPMX26_01750 0.72 +0.1 1,808,687 + MPMX26_01750 0.75 -0.5 1,808,692 + MPMX26_01750 0.76 +0.1 1,808,701 + MPMX26_01750 0.76 -0.8 1,808,701 + MPMX26_01750 0.76 -0.1 1,808,711 + MPMX26_01750 0.77 -0.1 1,808,711 + MPMX26_01750 0.77 -0.7 1,808,711 + MPMX26_01750 0.77 -0.0 1,808,722 + MPMX26_01750 0.78 -1.4 1,808,839 + MPMX26_01750 0.86 +0.5 1,809,017 + +0.5 1,809,025 + -1.0 1,809,025 + +0.1 1,809,425 - MPMX26_01751 0.34 +0.3 1,809,583 + MPMX26_01751 0.71 +0.9 1,809,962 + MPMX26_01752 0.19 -0.6 1,810,073 + MPMX26_01752 0.31 +0.9 1,810,097 + MPMX26_01752 0.34 -0.8 1,810,139 + MPMX26_01752 0.39 -0.7 1,810,310 + MPMX26_01752 0.58 +0.9 1,810,624 + +1.0
Or see this region's nucleotide sequence