Experiment: no UV control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01713 and MPMX26_01714 are separated by 114 nucleotides MPMX26_01714 and MPMX26_01715 are separated by 240 nucleotides MPMX26_01715 and MPMX26_01716 are separated by 93 nucleotides
MPMX26_01713: MPMX26_01713 - Metal-pseudopaline receptor CntO, at 1,768,597 to 1,770,723
_01713
MPMX26_01714: MPMX26_01714 - tRNA/tmRNA (uracil-C(5))-methyltransferase, at 1,770,838 to 1,771,923
_01714
MPMX26_01715: MPMX26_01715 - hypothetical protein, at 1,772,164 to 1,772,391
_01715
MPMX26_01716: MPMX26_01716 - 2-(hydroxymethyl)glutarate dehydrogenase, at 1,772,485 to 1,773,366
_01716
Position (kb)
1770
1771
1772 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1769.850 kb on + strand, within MPMX26_01713 at 1769.857 kb on + strand, within MPMX26_01713 at 1769.862 kb on + strand, within MPMX26_01713 at 1769.919 kb on + strand, within MPMX26_01713 at 1769.919 kb on + strand, within MPMX26_01713 at 1770.028 kb on + strand, within MPMX26_01713 at 1770.058 kb on + strand, within MPMX26_01713 at 1770.058 kb on + strand, within MPMX26_01713 at 1770.060 kb on + strand, within MPMX26_01713 at 1770.204 kb on + strand, within MPMX26_01713 at 1770.204 kb on + strand, within MPMX26_01713 at 1770.333 kb on + strand, within MPMX26_01713 at 1770.460 kb on + strand, within MPMX26_01713 at 1770.460 kb on + strand, within MPMX26_01713 at 1770.462 kb on + strand, within MPMX26_01713 at 1770.522 kb on + strand at 1770.522 kb on + strand at 1770.522 kb on + strand at 1770.597 kb on + strand at 1770.600 kb on + strand at 1770.618 kb on + strand at 1770.619 kb on + strand at 1770.855 kb on + strand at 1770.902 kb on + strand at 1770.937 kb on + strand at 1770.996 kb on + strand, within MPMX26_01714 at 1771.021 kb on + strand, within MPMX26_01714 at 1771.021 kb on + strand, within MPMX26_01714 at 1771.072 kb on + strand, within MPMX26_01714 at 1771.074 kb on + strand, within MPMX26_01714 at 1771.113 kb on + strand, within MPMX26_01714 at 1771.113 kb on + strand, within MPMX26_01714 at 1771.113 kb on + strand, within MPMX26_01714 at 1771.113 kb on + strand, within MPMX26_01714 at 1771.113 kb on + strand, within MPMX26_01714 at 1771.113 kb on + strand, within MPMX26_01714 at 1771.113 kb on + strand, within MPMX26_01714 at 1771.113 kb on + strand, within MPMX26_01714 at 1771.168 kb on + strand, within MPMX26_01714 at 1771.289 kb on + strand, within MPMX26_01714 at 1771.299 kb on + strand, within MPMX26_01714 at 1771.300 kb on + strand, within MPMX26_01714 at 1771.365 kb on + strand, within MPMX26_01714 at 1771.386 kb on + strand, within MPMX26_01714 at 1771.425 kb on + strand, within MPMX26_01714 at 1771.566 kb on - strand, within MPMX26_01714 at 1771.608 kb on + strand, within MPMX26_01714 at 1771.608 kb on + strand, within MPMX26_01714 at 1771.615 kb on + strand, within MPMX26_01714 at 1771.615 kb on + strand, within MPMX26_01714 at 1771.615 kb on + strand, within MPMX26_01714 at 1771.627 kb on + strand, within MPMX26_01714 at 1771.717 kb on + strand, within MPMX26_01714 at 1771.791 kb on + strand, within MPMX26_01714 at 1771.795 kb on + strand, within MPMX26_01714 at 1771.798 kb on + strand, within MPMX26_01714 at 1771.896 kb on + strand at 1772.179 kb on + strand at 1772.184 kb on + strand at 1772.184 kb on + strand at 1772.189 kb on + strand, within MPMX26_01715 at 1772.212 kb on + strand, within MPMX26_01715 at 1772.315 kb on + strand, within MPMX26_01715 at 1772.326 kb on + strand, within MPMX26_01715
Per-strain Table
Position Strand Gene LocusTag Fraction no UV control remove 1,769,850 + MPMX26_01713 0.59 +0.0 1,769,857 + MPMX26_01713 0.59 +0.2 1,769,862 + MPMX26_01713 0.59 +2.5 1,769,919 + MPMX26_01713 0.62 -0.5 1,769,919 + MPMX26_01713 0.62 +0.0 1,770,028 + MPMX26_01713 0.67 +0.1 1,770,058 + MPMX26_01713 0.69 -1.4 1,770,058 + MPMX26_01713 0.69 -0.6 1,770,060 + MPMX26_01713 0.69 +0.6 1,770,204 + MPMX26_01713 0.76 -0.4 1,770,204 + MPMX26_01713 0.76 -0.1 1,770,333 + MPMX26_01713 0.82 +0.1 1,770,460 + MPMX26_01713 0.88 +0.7 1,770,460 + MPMX26_01713 0.88 +0.1 1,770,462 + MPMX26_01713 0.88 +1.2 1,770,522 + -0.4 1,770,522 + -1.2 1,770,522 + -1.1 1,770,597 + -0.8 1,770,600 + +0.3 1,770,618 + -0.2 1,770,619 + +0.5 1,770,855 + -0.6 1,770,902 + +0.5 1,770,937 + -0.2 1,770,996 + MPMX26_01714 0.15 +1.2 1,771,021 + MPMX26_01714 0.17 +0.3 1,771,021 + MPMX26_01714 0.17 -0.6 1,771,072 + MPMX26_01714 0.22 -0.3 1,771,074 + MPMX26_01714 0.22 +0.3 1,771,113 + MPMX26_01714 0.25 +0.6 1,771,113 + MPMX26_01714 0.25 -0.6 1,771,113 + MPMX26_01714 0.25 +0.0 1,771,113 + MPMX26_01714 0.25 -0.1 1,771,113 + MPMX26_01714 0.25 -0.5 1,771,113 + MPMX26_01714 0.25 +0.0 1,771,113 + MPMX26_01714 0.25 -0.6 1,771,113 + MPMX26_01714 0.25 -0.3 1,771,168 + MPMX26_01714 0.30 -0.5 1,771,289 + MPMX26_01714 0.42 +3.1 1,771,299 + MPMX26_01714 0.42 -1.8 1,771,300 + MPMX26_01714 0.43 +0.3 1,771,365 + MPMX26_01714 0.49 -0.2 1,771,386 + MPMX26_01714 0.50 -1.1 1,771,425 + MPMX26_01714 0.54 +0.3 1,771,566 - MPMX26_01714 0.67 +0.9 1,771,608 + MPMX26_01714 0.71 -0.8 1,771,608 + MPMX26_01714 0.71 -0.9 1,771,615 + MPMX26_01714 0.72 +0.3 1,771,615 + MPMX26_01714 0.72 +0.5 1,771,615 + MPMX26_01714 0.72 -0.5 1,771,627 + MPMX26_01714 0.73 -0.1 1,771,717 + MPMX26_01714 0.81 -0.4 1,771,791 + MPMX26_01714 0.88 -0.3 1,771,795 + MPMX26_01714 0.88 +0.3 1,771,798 + MPMX26_01714 0.88 +0.4 1,771,896 + -0.2 1,772,179 + -0.1 1,772,184 + -0.7 1,772,184 + -1.1 1,772,189 + MPMX26_01715 0.11 +1.1 1,772,212 + MPMX26_01715 0.21 +0.3 1,772,315 + MPMX26_01715 0.66 -0.3 1,772,326 + MPMX26_01715 0.71 -0.3
Or see this region's nucleotide sequence